EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMFAG00000040365 (Gene tree)
Gene ID
102144888
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Macaca_fascicularis
Status
putative
Strand
Plus strand
Length
29209 bases
Position
chr10:76640408-76669616
Accession
102144888
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMFAP00000040573PABPPF00658.181.4e-2711
ENSMFAP00000040579PABPPF00658.184.6e-2411
ENSMFAP00000040573RRM_5PF13893.64.9e-1011
ENSMFAP00000040573RRM_1PF00076.222e-9014
ENSMFAP00000040573RRM_1PF00076.222e-9024
ENSMFAP00000040573RRM_1PF00076.222e-9034
ENSMFAP00000040573RRM_1PF00076.222e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMFAT00000014847PABPC1L-202480-ENSMFAP00000040579159 (aa)-A0A2K5WU70
ENSMFAT00000014841PABPC1L-2011845XM_015429870ENSMFAP00000040573614 (aa)XP_015285356A0A2K5WTQ4
Gene Model
Click here to download ENSMFAG00000040365's gene model file
Pathways
Pathway IDPathway NameSource
mcf03013RNA transportKEGG
mcf03015mRNA surveillance pathwayKEGG
mcf03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000040365's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMFAG00000040365PABPC1L6338.571ENSMFAG00000003692ELAVL39033.735
ENSMFAG00000040365PABPC1L5630.769ENSMFAG00000031561HNRNPA18830.769
ENSMFAG00000040365PABPC1L9969.614ENSMFAG00000044845PABPC19869.614
ENSMFAG00000040365PABPC1L5435.135ENSMFAG00000003505CELF16635.135
ENSMFAG00000040365PABPC1L9753.623ENSMFAG00000034213-9653.623
ENSMFAG00000040365PABPC1L9966.023ENSMFAG00000016858PABPC39866.023
ENSMFAG00000040365PABPC1L5933.784ENSMFAG00000033084CELF25736.047
ENSMFAG00000040365PABPC1L6159.551ENSMFAG00000024561PABPC59659.504
ENSMFAG00000040365PABPC1L9767.143ENSMFAG00000004725-9767.143
ENSMFAG00000040365PABPC1L6135.616ENSMFAG00000040182CELF39135.616
ENSMFAG00000040365PABPC1L6141.429ENSMFAG00000039866ELAVL48833.735
ENSMFAG00000040365PABPC1L5931.383ENSMFAG00000039067-6831.383
ENSMFAG00000040365PABPC1L5835.065ENSMFAG00000040787ELAVL19431.188
ENSMFAG00000040365PABPC1L5830.994ENSMFAG00000002789TIAL17630.682
ENSMFAG00000040365PABPC1L5632.317ENSMFAG00000037149-8932.317
ENSMFAG00000040365PABPC1L9967.690ENSMFAG00000041481PABPC49767.152
ENSMFAG00000040365PABPC1L6134.940ENSMFAG00000039694ELAVL29234.940
ENSMFAG00000040365PABPC1L5730.488ENSMFAG00000000823-5230.128
ENSMFAG00000040365PABPC1L6070.202ENSMFAG00000028878-9970.202
ENSMFAG00000040365PABPC1L5631.707ENSMFAG00000030522HNRNPA05332.692
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMFAG00000040365PABPC1L10098.860ENSG00000101104PABPC1L10098.860Homo_sapiens
ENSMFAG00000040365PABPC1L9867.040ENSAPOG00000010842pabpc1l9967.040Acanthochromis_polyacanthus
ENSMFAG00000040365PABPC1L9978.505ENSAMEG00000004099PABPC1L10078.816Ailuropoda_melanoleuca
ENSMFAG00000040365PABPC1L9870.183ENSACIG00000021004-9980.220Amphilophus_citrinellus
ENSMFAG00000040365PABPC1L9966.719ENSAOCG00000006167-9966.878Amphiprion_ocellaris
ENSMFAG00000040365PABPC1L9973.141ENSAPEG00000010558-9781.188Amphiprion_percula
ENSMFAG00000040365PABPC1L9969.467ENSATEG00000007428pabpc1l9969.467Anabas_testudineus
ENSMFAG00000040365PABPC1L9774.595ENSAPLG00000008415PABPC1L9874.677Anas_platyrhynchos
ENSMFAG00000040365PABPC1L9974.960ENSACAG00000011841PABPC1L9874.799Anolis_carolinensis
ENSMFAG00000040365PABPC1L10096.743ENSANAG00000026826PABPC1L10096.743Aotus_nancymaae
ENSMFAG00000040365PABPC1L9968.371ENSACLG00000024791pabpc1l9968.371Astatotilapia_calliptera
ENSMFAG00000040365PABPC1L9971.246ENSAMXG00000013552pabpc1l9970.240Astyanax_mexicanus
ENSMFAG00000040365PABPC1L6777.193ENSBTAG00000016849PABPC1L8578.495Bos_taurus
ENSMFAG00000040365PABPC1L9473.333ENSBTAG00000050862-8177.027Bos_taurus
ENSMFAG00000040365PABPC1L5997.024ENSBTAG00000055300-10097.024Bos_taurus
ENSMFAG00000040365PABPC1L6077.011ENSCJAG00000038506-10077.011Callithrix_jacchus
ENSMFAG00000040365PABPC1L10097.231ENSCJAG00000017628PABPC1L10097.231Callithrix_jacchus
ENSMFAG00000040365PABPC1L9976.124ENSCAFG00000009573PABPC1L10075.542Canis_familiaris
ENSMFAG00000040365PABPC1L9988.361ENSCAFG00020013828PABPC1L9988.361Canis_lupus_dingo
ENSMFAG00000040365PABPC1L9787.291ENSCHIG00000025759PABPC1L9385.505Capra_hircus
ENSMFAG00000040365PABPC1L10088.436ENSTSYG00000006645PABPC1L10088.436Carlito_syrichta
ENSMFAG00000040365PABPC1L9980.146ENSCAPG00000014519PABPC1L10080.146Cavia_aperea
ENSMFAG00000040365PABPC1L10083.387ENSCPOG00000013633PABPC1L10083.387Cavia_porcellus
ENSMFAG00000040365PABPC1L10095.765ENSCCAG00000023338PABPC1L10095.765Cebus_capucinus
ENSMFAG00000040365PABPC1L10099.511ENSCATG00000034065PABPC1L10099.511Cercocebus_atys
ENSMFAG00000040365PABPC1L10081.613ENSCLAG00000005298PABPC1L10082.903Chinchilla_lanigera
ENSMFAG00000040365PABPC1L10099.186ENSCSAG00000014242PABPC1L10099.186Chlorocebus_sabaeus
ENSMFAG00000040365PABPC1L9258.904ENSCPBG00000017765-7660.741Chrysemys_picta_bellii
ENSMFAG00000040365PABPC1L7281.982ENSCPBG00000017755-9981.982Chrysemys_picta_bellii
ENSMFAG00000040365PABPC1L5479.545ENSCPBG00000007810-8379.545Chrysemys_picta_bellii
ENSMFAG00000040365PABPC1L9750.505ENSCING00000002796-7477.108Ciona_intestinalis
ENSMFAG00000040365PABPC1L9860.032ENSCSAVG00000004246-8978.313Ciona_savignyi
ENSMFAG00000040365PABPC1L9757.333ENSCSAVG00000003102-10081.507Ciona_savignyi
ENSMFAG00000040365PABPC1L10093.900ENSCANG00000037530PABPC1L10093.900Colobus_angolensis_palliatus
ENSMFAG00000040365PABPC1L9976.948ENSCGRG00001021938Pabpc1l9976.948Cricetulus_griseus_chok1gshd
ENSMFAG00000040365PABPC1L9976.948ENSCGRG00000007946Pabpc1l9976.948Cricetulus_griseus_crigri
ENSMFAG00000040365PABPC1L9865.517ENSCSEG00000021295pabpc1l9965.517Cynoglossus_semilaevis
ENSMFAG00000040365PABPC1L9969.726ENSCVAG00000015943-8686.154Cyprinodon_variegatus
ENSMFAG00000040365PABPC1L9970.720ENSDARG00000002597pabpc1l8886.154Danio_rerio
ENSMFAG00000040365PABPC1L9989.723ENSDNOG00000048450PABPC1L9989.723Dasypus_novemcinctus
ENSMFAG00000040365PABPC1L9986.275ENSDORG00000001067Pabpc1l9986.275Dipodomys_ordii
ENSMFAG00000040365PABPC1L9691.057ENSETEG00000009969PABPC1L7391.057Echinops_telfairi
ENSMFAG00000040365PABPC1L5995.833ENSEASG00005023408-10095.833Equus_asinus_asinus
ENSMFAG00000040365PABPC1L5188.485ENSEASG00005023407-6788.485Equus_asinus_asinus
ENSMFAG00000040365PABPC1L9279.452ENSEASG00005023406-8578.261Equus_asinus_asinus
ENSMFAG00000040365PABPC1L9476.000ENSECAG00000022681PABPC1L9376.282Equus_caballus
ENSMFAG00000040365PABPC1L6786.522ENSECAG00000040139-8286.522Equus_caballus
ENSMFAG00000040365PABPC1L10083.550ENSEEUG00000005978PABPC1L10083.550Erinaceus_europaeus
ENSMFAG00000040365PABPC1L9970.794ENSELUG00000001811pabpc1l9969.952Esox_lucius
ENSMFAG00000040365PABPC1L9989.016ENSFCAG00000011692PABPC1L9989.016Felis_catus
ENSMFAG00000040365PABPC1L8875.138ENSFALG00000005372PABPC1L9075.138Ficedula_albicollis
ENSMFAG00000040365PABPC1L10082.276ENSFDAG00000008291PABPC1L10082.114Fukomys_damarensis
ENSMFAG00000040365PABPC1L9969.453ENSFHEG00000003398pabpc1l9969.243Fundulus_heteroclitus
ENSMFAG00000040365PABPC1L9968.669ENSGMOG00000004437pabpc1l9868.669Gadus_morhua
ENSMFAG00000040365PABPC1L9770.619ENSGALG00000004123PABPC1L9983.453Gallus_gallus
ENSMFAG00000040365PABPC1L9966.462ENSGAFG00000021057pabpc1l9966.102Gambusia_affinis
ENSMFAG00000040365PABPC1L9967.840ENSGACG00000002792pabpc1l9967.360Gasterosteus_aculeatus
ENSMFAG00000040365PABPC1L9976.206ENSGAGG00000000589PABPC1L9876.206Gopherus_agassizii
ENSMFAG00000040365PABPC1L10098.534ENSGGOG00000004584PABPC1L10098.534Gorilla_gorilla
ENSMFAG00000040365PABPC1L9968.211ENSHBUG00000006134pabpc1l9968.211Haplochromis_burtoni
ENSMFAG00000040365PABPC1L10083.387ENSHGLG00000008434PABPC1L10083.387Heterocephalus_glaber_female
ENSMFAG00000040365PABPC1L10083.387ENSHGLG00100012151PABPC1L10083.387Heterocephalus_glaber_male
ENSMFAG00000040365PABPC1L5982.022ENSHGLG00100019506-10082.022Heterocephalus_glaber_male
ENSMFAG00000040365PABPC1L9967.974ENSHCOG00000009270pabpc1l9967.642Hippocampus_comes
ENSMFAG00000040365PABPC1L5364.615ENSIPUG00000005537-10064.615Ictalurus_punctatus
ENSMFAG00000040365PABPC1L5962.069ENSIPUG00000006760-8862.069Ictalurus_punctatus
ENSMFAG00000040365PABPC1L9971.520ENSIPUG00000012602pabpc1l9971.520Ictalurus_punctatus
ENSMFAG00000040365PABPC1L6062.644ENSIPUG00000006780-8562.644Ictalurus_punctatus
ENSMFAG00000040365PABPC1L10088.599ENSSTOG00000003739PABPC1L10088.599Ictidomys_tridecemlineatus
ENSMFAG00000040365PABPC1L9968.364ENSJJAG00000022406Pabpc1l9964.610Jaculus_jaculus
ENSMFAG00000040365PABPC1L9969.628ENSKMAG00000016847pabpc1l9969.692Kryptolebias_marmoratus
ENSMFAG00000040365PABPC1L9967.152ENSLBEG00000010084pabpc1l9967.512Labrus_bergylta
ENSMFAG00000040365PABPC1L9970.111ENSLACG00000005762PABPC1L9971.507Latimeria_chalumnae
ENSMFAG00000040365PABPC1L9971.108ENSLOCG00000007519pabpc1l9871.061Lepisosteus_oculatus
ENSMFAG00000040365PABPC1L9985.096ENSLAFG00000003553PABPC1L10085.096Loxodonta_africana
ENSMFAG00000040365PABPC1L100100.000ENSMMUG00000013209-100100.000Macaca_mulatta
ENSMFAG00000040365PABPC1L10097.083ENSMNEG00000032298PABPC1L10097.083Macaca_nemestrina
ENSMFAG00000040365PABPC1L10099.511ENSMLEG00000043139PABPC1L10099.511Mandrillus_leucophaeus
ENSMFAG00000040365PABPC1L9768.525ENSMAMG00000011854pabpc1l9768.309Mastacembelus_armatus
ENSMFAG00000040365PABPC1L9968.371ENSMZEG00005023713pabpc1l9968.371Maylandia_zebra
ENSMFAG00000040365PABPC1L9975.523ENSMGAG00000003674PABPC1L9875.523Meleagris_gallopavo
ENSMFAG00000040365PABPC1L9284.932ENSMICG00000000974-9186.029Microcebus_murinus
ENSMFAG00000040365PABPC1L9975.162ENSMOCG00000013186Pabpc1l9975.327Microtus_ochrogaster
ENSMFAG00000040365PABPC1L9968.650ENSMMOG00000020574-9086.154Mola_mola
ENSMFAG00000040365PABPC1L9780.134ENSMODG00000016198PABPC1L9979.967Monodelphis_domestica
ENSMFAG00000040365PABPC1L9766.937ENSMALG00000021622pabpc1l10066.558Monopterus_albus
ENSMFAG00000040365PABPC1L9977.288MGP_CAROLIEiJ_G0024627Pabpc1l9977.288Mus_caroli
ENSMFAG00000040365PABPC1L9977.124ENSMUSG00000054582Pabpc1l9977.124Mus_musculus
ENSMFAG00000040365PABPC1L9977.488MGP_PahariEiJ_G0026071Pabpc1l9977.488Mus_pahari
ENSMFAG00000040365PABPC1L9977.288MGP_SPRETEiJ_G0025549Pabpc1l9977.288Mus_spretus
ENSMFAG00000040365PABPC1L9986.526ENSMPUG00000017646PABPC1L9986.526Mustela_putorius_furo
ENSMFAG00000040365PABPC1L9879.032ENSMLUG00000006324PABPC1L9779.032Myotis_lucifugus
ENSMFAG00000040365PABPC1L9980.065ENSNGAG00000010458Pabpc1l9980.065Nannospalax_galili
ENSMFAG00000040365PABPC1L9872.902ENSNBRG00000016633pabpc1l9979.310Neolamprologus_brichardi
ENSMFAG00000040365PABPC1L9197.222ENSNLEG00000006653-10097.024Nomascus_leucogenys
ENSMFAG00000040365PABPC1L10068.078ENSMEUG00000007905-10068.078Notamacropus_eugenii
ENSMFAG00000040365PABPC1L10087.317ENSOPRG00000011846PABPC1L10087.317Ochotona_princeps
ENSMFAG00000040365PABPC1L10075.896ENSODEG00000015482PABPC1L10075.896Octodon_degus
ENSMFAG00000040365PABPC1L5875.000ENSODEG00000002920-9775.000Octodon_degus
ENSMFAG00000040365PABPC1L9968.371ENSONIG00000017314pabpc1l9968.371Oreochromis_niloticus
ENSMFAG00000040365PABPC1L8968.354ENSOANG00000015793-10068.354Ornithorhynchus_anatinus
ENSMFAG00000040365PABPC1L9980.556ENSOCUG00000003005PABPC1L10080.556Oryctolagus_cuniculus
ENSMFAG00000040365PABPC1L9772.066ENSORLG00000010322pabpc1l9978.205Oryzias_latipes
ENSMFAG00000040365PABPC1L9772.066ENSORLG00020021193pabpc1l9978.205Oryzias_latipes_hni
ENSMFAG00000040365PABPC1L9772.066ENSORLG00015017018pabpc1l9976.923Oryzias_latipes_hsok
ENSMFAG00000040365PABPC1L9964.742ENSOMEG00000010789pabpc1l9964.536Oryzias_melastigma
ENSMFAG00000040365PABPC1L9987.340ENSOGAG00000032999PABPC1L10087.340Otolemur_garnettii
ENSMFAG00000040365PABPC1L9987.377ENSOARG00000004578PABPC1L9987.377Ovis_aries
ENSMFAG00000040365PABPC1L10098.697ENSPPAG00000039677PABPC1L10098.697Pan_paniscus
ENSMFAG00000040365PABPC1L6382.099ENSPPRG00000019327-9882.099Panthera_pardus
ENSMFAG00000040365PABPC1L9280.137ENSPPRG00000020242-9080.597Panthera_pardus
ENSMFAG00000040365PABPC1L9889.073ENSPTIG00000006524PABPC1L9989.073Panthera_tigris_altaica
ENSMFAG00000040365PABPC1L6399.383ENSPTRG00000013531PABPC1L9999.383Pan_troglodytes
ENSMFAG00000040365PABPC1L9897.436ENSPTRG00000044192-10097.024Pan_troglodytes
ENSMFAG00000040365PABPC1L10099.511ENSPANG00000018788PABPC1L10099.511Papio_anubis
ENSMFAG00000040365PABPC1L5381.679ENSPKIG00000016810-9381.679Paramormyrops_kingsleyae
ENSMFAG00000040365PABPC1L9971.543ENSPKIG00000007322pabpc1l9971.014Paramormyrops_kingsleyae
ENSMFAG00000040365PABPC1L6883.693ENSPSIG00000013289PABPC1L9983.693Pelodiscus_sinensis
ENSMFAG00000040365PABPC1L7267.337ENSPMGG00000023121-9068.912Periophthalmus_magnuspinnatus
ENSMFAG00000040365PABPC1L6179.070ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSMFAG00000040365PABPC1L9976.432ENSPEMG00000020671Pabpc1l9977.124Peromyscus_maniculatus_bairdii
ENSMFAG00000040365PABPC1L9970.016ENSPFOG00000013241pabpc1l9969.368Poecilia_formosa
ENSMFAG00000040365PABPC1L5386.923ENSPLAG00000023686-9286.923Poecilia_latipinna
ENSMFAG00000040365PABPC1L9969.579ENSPLAG00000017490-9969.530Poecilia_latipinna
ENSMFAG00000040365PABPC1L9968.850ENSPMEG00000007677pabpc1l9968.480Poecilia_mexicana
ENSMFAG00000040365PABPC1L5386.923ENSPMEG00000009185-8886.923Poecilia_mexicana
ENSMFAG00000040365PABPC1L5078.481ENSPREG00000015197-7380.000Poecilia_reticulata
ENSMFAG00000040365PABPC1L6776.998ENSPREG00000015886pabpc1l9976.998Poecilia_reticulata
ENSMFAG00000040365PABPC1L10098.697ENSPPYG00000011042PABPC1L10098.697Pongo_abelii
ENSMFAG00000040365PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSMFAG00000040365PABPC1L9989.621ENSPCOG00000020630PABPC1L9989.621Propithecus_coquereli
ENSMFAG00000040365PABPC1L9985.902ENSPVAG00000012663PABPC1L9985.902Pteropus_vampyrus
ENSMFAG00000040365PABPC1L9967.488ENSPNYG00000004101pabpc1l9979.310Pundamilia_nyererei
ENSMFAG00000040365PABPC1L9964.480ENSPNAG00000021248pabpc1l9963.622Pygocentrus_nattereri
ENSMFAG00000040365PABPC1L9977.310ENSRNOG00000012750Pabpc1l10077.310Rattus_norvegicus
ENSMFAG00000040365PABPC1L10098.860ENSRBIG00000035381PABPC1L10098.860Rhinopithecus_bieti
ENSMFAG00000040365PABPC1L10098.697ENSRROG00000044498PABPC1L10098.697Rhinopithecus_roxellana
ENSMFAG00000040365PABPC1L10096.580ENSSBOG00000009532-10096.580Saimiri_boliviensis_boliviensis
ENSMFAG00000040365PABPC1L9875.641ENSSBOG00000020828-9277.564Saimiri_boliviensis_boliviensis
ENSMFAG00000040365PABPC1L9774.180ENSSHAG00000011446PABPC1L10074.180Sarcophilus_harrisii
ENSMFAG00000040365PABPC1L9971.955ENSSFOG00015017304pabpc1l9971.429Scleropages_formosus
ENSMFAG00000040365PABPC1L8980.682ENSSMAG00000010516pabpc1l9887.597Scophthalmus_maximus
ENSMFAG00000040365PABPC1L9968.463ENSSDUG00000014743pabpc1l9968.463Seriola_dumerili
ENSMFAG00000040365PABPC1L9873.861ENSSLDG00000006981pabpc1l9877.169Seriola_lalandi_dorsalis
ENSMFAG00000040365PABPC1L9973.997ENSSPUG00000004233PABPC1L9873.997Sphenodon_punctatus
ENSMFAG00000040365PABPC1L9965.950ENSSPAG00000017137pabpc1l9964.959Stegastes_partitus
ENSMFAG00000040365PABPC1L9986.842ENSSSCG00000007382PABPC1L9986.678Sus_scrofa
ENSMFAG00000040365PABPC1L9974.528ENSTGUG00000005114PABPC1L9974.528Taeniopygia_guttata
ENSMFAG00000040365PABPC1L9767.532ENSTRUG00000011085pabpc1l9767.532Takifugu_rubripes
ENSMFAG00000040365PABPC1L9965.823ENSTNIG00000017903pabpc1l9865.823Tetraodon_nigroviridis
ENSMFAG00000040365PABPC1L9494.521ENSTBEG00000002851PABPC1L8094.521Tupaia_belangeri
ENSMFAG00000040365PABPC1L9486.458ENSTTRG00000007618PABPC1L10086.486Tursiops_truncatus
ENSMFAG00000040365PABPC1L9986.161ENSUAMG00000017682PABPC1L9986.161Ursus_americanus
ENSMFAG00000040365PABPC1L6790.786ENSUMAG00000025436PABPC1L9490.786Ursus_maritimus
ENSMFAG00000040365PABPC1L9893.281ENSVVUG00000018939PABPC1L9993.281Vulpes_vulpes
ENSMFAG00000040365PABPC1L9970.192ENSXETG00000022831pabpc1l9870.209Xenopus_tropicalis
ENSMFAG00000040365PABPC1L9970.376ENSXCOG00000005459pabpc1l9982.270Xiphophorus_couchianus
ENSMFAG00000040365PABPC1L9969.903ENSXMAG00000017135pabpc1l9969.530Xiphophorus_maculatus

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