EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000040995 (Gene tree)
Gene ID: 102128723
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 6728 bases
Position: chr6:111624681-111631408
Accession: 102128723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000002113	SRP19	PF01922.17	9.7e-26	1	1
ENSMFAP00000002117	SRP19	PF01922.17	2.5e-14	1	2
ENSMFAP00000002117	SRP19	PF01922.17	2.5e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000027264	-	237	-	ENSMFAP00000002122	78 (aa)	-	A0A2K5TPZ7
ENSMFAT00000027255	-	1026	XM_005557521	ENSMFAP00000002113	110 (aa)	XP_005557578	A0A2K5TPZ6
ENSMFAT00000027259	-	363	XM_005557519	ENSMFAP00000002117	120 (aa)	XP_005557576	A0A2K5TPZ3

Gene Model

Click here to download ENSMFAG00000040995's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000040995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000040995	-	100	89.167	ENSMFAG00000000554	-	100	89.167
ENSMFAG00000040995	-	65	85.915	ENSMFAG00000040055	-	90	55.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000040995	-	67	88.750	ENSCAFG00020008822	-	62	93.151	Canis_lupus_dingo
ENSMFAG00000040995	-	100	100.000	ENSCATG00000030502	-	100	100.000	Cercocebus_atys
ENSMFAG00000040995	-	93	94.595	ENSCLAG00000008943	-	93	94.595	Chinchilla_lanigera
ENSMFAG00000040995	-	100	100.000	ENSCANG00000041172	-	100	100.000	Colobus_angolensis_palliatus
ENSMFAG00000040995	-	61	90.411	ENSCGRG00001012009	-	66	90.411	Cricetulus_griseus_chok1gshd
ENSMFAG00000040995	-	60	94.444	ENSEEUG00000009240	-	89	94.444	Erinaceus_europaeus
ENSMFAG00000040995	-	100	99.091	ENSGGOG00000027482	SRP19	100	99.091	Gorilla_gorilla
ENSMFAG00000040995	-	93	71.552	ENSGGOG00000038737	-	93	71.552	Gorilla_gorilla
ENSMFAG00000040995	-	96	78.302	ENSHGLG00000006069	-	82	74.419	Heterocephalus_glaber_female
ENSMFAG00000040995	-	96	78.302	ENSHGLG00100006563	-	82	74.419	Heterocephalus_glaber_male
ENSMFAG00000040995	-	100	100.000	ENSMMUG00000000331	-	100	100.000	Macaca_mulatta
ENSMFAG00000040995	-	100	100.000	ENSMLEG00000030461	-	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000040995	-	96	67.925	ENSMOCG00000010964	-	94	66.929	Microtus_ochrogaster
ENSMFAG00000040995	-	100	100.000	ENSNLEG00000030884	-	100	100.000	Nomascus_leucogenys
ENSMFAG00000040995	-	93	95.495	ENSODEG00000005033	-	93	95.495	Octodon_degus
ENSMFAG00000040995	-	93	95.495	ENSODEG00000003165	-	93	95.495	Octodon_degus
ENSMFAG00000040995	-	82	87.755	ENSODEG00000000221	-	89	87.755	Octodon_degus
ENSMFAG00000040995	-	93	94.595	ENSODEG00000016828	-	93	94.595	Octodon_degus
ENSMFAG00000040995	-	93	69.828	ENSPPAG00000040638	-	93	69.828	Pan_paniscus
ENSMFAG00000040995	-	93	70.175	ENSPTRG00000045571	-	93	70.175	Pan_troglodytes
ENSMFAG00000040995	-	93	64.865	ENSPCOG00000019414	-	91	64.865	Propithecus_coquereli
ENSMFAG00000040995	-	100	100.000	ENSRROG00000033974	-	100	100.000	Rhinopithecus_roxellana
ENSMFAG00000040995	-	56	95.522	ENSSHAG00000009452	-	88	94.203	Sarcophilus_harrisii
ENSMFAG00000040995	-	59	74.648	ENSSPAG00000005240	-	57	74.648	Stegastes_partitus