EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000041068 (Gene tree)
Gene ID: 102125007
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 84409 bases
Position: chr1:15081542-15165950
Accession: 102125007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000043394	SpoU_methylase	PF00588.19	8.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000017685	TARBP1-201	4767	XM_005539753	ENSMFAP00000043394	1588 (aa)	XP_005539810	A0A2K5X1U2

Gene Model

Click here to download ENSMFAG00000041068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000041068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000041068	TARBP1	100	93.038	ENSG00000059588	TARBP1	100	92.976	Homo_sapiens
ENSMFAG00000041068	TARBP1	99	41.506	ENSAPOG00000016419	si:dkey-85a20.4	88	43.780	Acanthochromis_polyacanthus
ENSMFAG00000041068	TARBP1	85	82.688	ENSAMEG00000003359	TARBP1	100	82.688	Ailuropoda_melanoleuca
ENSMFAG00000041068	TARBP1	99	41.551	ENSATEG00000020266	si:dkey-85a20.4	85	44.483	Anabas_testudineus
ENSMFAG00000041068	TARBP1	85	65.864	ENSAPLG00000007666	TARBP1	100	65.864	Anas_platyrhynchos
ENSMFAG00000041068	TARBP1	99	57.604	ENSACAG00000001142	TARBP1	99	57.187	Anolis_carolinensis
ENSMFAG00000041068	TARBP1	99	81.717	ENSBTAG00000004517	TARBP1	99	83.333	Bos_taurus
ENSMFAG00000041068	TARBP1	100	90.511	ENSCJAG00000018155	TARBP1	100	90.500	Callithrix_jacchus
ENSMFAG00000041068	TARBP1	89	82.648	ENSCAFG00000011533	TARBP1	100	82.910	Canis_familiaris
ENSMFAG00000041068	TARBP1	99	81.723	ENSCAFG00020027141	TARBP1	99	82.555	Canis_lupus_dingo
ENSMFAG00000041068	TARBP1	99	80.321	ENSCHIG00000011437	TARBP1	99	81.061	Capra_hircus
ENSMFAG00000041068	TARBP1	82	85.126	ENSTSYG00000010382	TARBP1	97	85.126	Carlito_syrichta
ENSMFAG00000041068	TARBP1	79	66.172	ENSCAPG00000010831	TARBP1	99	66.172	Cavia_aperea
ENSMFAG00000041068	TARBP1	99	73.230	ENSCPOG00000013995	TARBP1	99	73.897	Cavia_porcellus
ENSMFAG00000041068	TARBP1	100	90.943	ENSCCAG00000037278	TARBP1	100	90.932	Cebus_capucinus
ENSMFAG00000041068	TARBP1	100	95.132	ENSCATG00000011754	TARBP1	100	95.132	Cercocebus_atys
ENSMFAG00000041068	TARBP1	84	80.000	ENSCLAG00000003655	TARBP1	99	80.000	Chinchilla_lanigera
ENSMFAG00000041068	TARBP1	80	95.575	ENSCSAG00000010100	TARBP1	100	95.575	Chlorocebus_sabaeus
ENSMFAG00000041068	TARBP1	91	68.410	ENSCPBG00000005587	TARBP1	99	68.410	Chrysemys_picta_bellii
ENSMFAG00000041068	TARBP1	85	95.521	ENSCANG00000034343	TARBP1	100	95.521	Colobus_angolensis_palliatus
ENSMFAG00000041068	TARBP1	99	72.875	ENSCGRG00001016690	Tarbp1	99	72.500	Cricetulus_griseus_chok1gshd
ENSMFAG00000041068	TARBP1	92	74.097	ENSCGRG00000016893	Tarbp1	99	74.232	Cricetulus_griseus_crigri
ENSMFAG00000041068	TARBP1	99	39.852	ENSCSEG00000005255	si:dkey-85a20.4	89	45.292	Cynoglossus_semilaevis
ENSMFAG00000041068	TARBP1	99	41.176	ENSDARG00000079055	si:dkey-85a20.4	99	54.498	Danio_rerio
ENSMFAG00000041068	TARBP1	99	80.665	ENSDNOG00000008637	TARBP1	99	80.725	Dasypus_novemcinctus
ENSMFAG00000041068	TARBP1	81	71.781	ENSDORG00000007984	Tarbp1	100	71.781	Dipodomys_ordii
ENSMFAG00000041068	TARBP1	99	84.308	ENSEASG00005000252	TARBP1	99	84.272	Equus_asinus_asinus
ENSMFAG00000041068	TARBP1	99	84.246	ENSECAG00000023673	TARBP1	99	88.293	Equus_caballus
ENSMFAG00000041068	TARBP1	99	81.443	ENSFCAG00000014183	TARBP1	99	81.381	Felis_catus
ENSMFAG00000041068	TARBP1	81	65.848	ENSFALG00000013565	TARBP1	99	65.800	Ficedula_albicollis
ENSMFAG00000041068	TARBP1	80	73.186	ENSFDAG00000001308	TARBP1	99	73.262	Fukomys_damarensis
ENSMFAG00000041068	TARBP1	80	54.596	ENSFHEG00000007565	si:dkey-85a20.4	79	54.596	Fundulus_heteroclitus
ENSMFAG00000041068	TARBP1	85	41.655	ENSGMOG00000004549	si:dkey-85a20.4	99	41.727	Gadus_morhua
ENSMFAG00000041068	TARBP1	97	64.500	ENSGALG00000011000	TARBP1	100	56.895	Gallus_gallus
ENSMFAG00000041068	TARBP1	92	42.088	ENSGAFG00000007387	si:dkey-85a20.4	85	43.352	Gambusia_affinis
ENSMFAG00000041068	TARBP1	87	43.719	ENSGACG00000005865	si:dkey-85a20.4	99	43.938	Gasterosteus_aculeatus
ENSMFAG00000041068	TARBP1	99	65.389	ENSGAGG00000012102	TARBP1	100	65.475	Gopherus_agassizii
ENSMFAG00000041068	TARBP1	86	90.559	ENSGGOG00000022879	TARBP1	100	90.559	Gorilla_gorilla
ENSMFAG00000041068	TARBP1	94	43.256	ENSHBUG00000008877	si:dkey-85a20.4	86	45.014	Haplochromis_burtoni
ENSMFAG00000041068	TARBP1	99	75.589	ENSHGLG00000011592	TARBP1	99	75.699	Heterocephalus_glaber_female
ENSMFAG00000041068	TARBP1	97	75.515	ENSHGLG00100015169	TARBP1	99	75.515	Heterocephalus_glaber_male
ENSMFAG00000041068	TARBP1	99	39.549	ENSIPUG00000005249	si:dkey-85a20.4	84	42.405	Ictalurus_punctatus
ENSMFAG00000041068	TARBP1	90	73.057	ENSSTOG00000032291	TARBP1	99	73.057	Ictidomys_tridecemlineatus
ENSMFAG00000041068	TARBP1	96	69.097	ENSJJAG00000017840	Tarbp1	99	69.097	Jaculus_jaculus
ENSMFAG00000041068	TARBP1	79	47.861	ENSKMAG00000017546	si:dkey-85a20.4	75	48.262	Kryptolebias_marmoratus
ENSMFAG00000041068	TARBP1	66	50.599	ENSLBEG00000012132	si:dkey-85a20.4	75	50.732	Labrus_bergylta
ENSMFAG00000041068	TARBP1	99	50.151	ENSLACG00000004337	TARBP1	99	50.274	Latimeria_chalumnae
ENSMFAG00000041068	TARBP1	99	45.471	ENSLOCG00000016214	si:dkey-85a20.4	85	48.942	Lepisosteus_oculatus
ENSMFAG00000041068	TARBP1	96	78.851	ENSLAFG00000011394	TARBP1	100	79.482	Loxodonta_africana
ENSMFAG00000041068	TARBP1	100	98.446	ENSMMUG00000021703	TARBP1	100	98.446	Macaca_mulatta
ENSMFAG00000041068	TARBP1	100	95.933	ENSMNEG00000045002	TARBP1	100	95.933	Macaca_nemestrina
ENSMFAG00000041068	TARBP1	84	96.094	ENSMLEG00000044182	TARBP1	100	96.094	Mandrillus_leucophaeus
ENSMFAG00000041068	TARBP1	92	43.551	ENSMAMG00000021760	si:dkey-85a20.4	89	44.077	Mastacembelus_armatus
ENSMFAG00000041068	TARBP1	94	43.191	ENSMZEG00005005751	si:dkey-85a20.4	86	44.944	Maylandia_zebra
ENSMFAG00000041068	TARBP1	100	71.891	ENSMAUG00000020968	Tarbp1	99	71.828	Mesocricetus_auratus
ENSMFAG00000041068	TARBP1	99	80.533	ENSMICG00000015280	TARBP1	99	80.273	Microcebus_murinus
ENSMFAG00000041068	TARBP1	99	71.965	ENSMOCG00000004128	Tarbp1	99	71.902	Microtus_ochrogaster
ENSMFAG00000041068	TARBP1	99	40.514	ENSMMOG00000007795	si:dkey-85a20.4	88	42.491	Mola_mola
ENSMFAG00000041068	TARBP1	99	70.265	ENSMODG00000008504	TARBP1	100	70.265	Monodelphis_domestica
ENSMFAG00000041068	TARBP1	86	43.652	ENSMALG00000002916	si:dkey-85a20.4	88	43.243	Monopterus_albus
ENSMFAG00000041068	TARBP1	100	70.753	MGP_CAROLIEiJ_G0031729	Tarbp1	99	70.629	Mus_caroli
ENSMFAG00000041068	TARBP1	100	70.504	ENSMUSG00000090290	Tarbp1	99	70.380	Mus_musculus
ENSMFAG00000041068	TARBP1	99	71.099	MGP_PahariEiJ_G0023326	Tarbp1	99	70.974	Mus_pahari
ENSMFAG00000041068	TARBP1	99	70.841	MGP_SPRETEiJ_G0032846	Tarbp1	99	70.717	Mus_spretus
ENSMFAG00000041068	TARBP1	77	80.321	ENSMPUG00000002802	TARBP1	99	80.321	Mustela_putorius_furo
ENSMFAG00000041068	TARBP1	85	71.895	ENSMLUG00000002414	TARBP1	99	71.895	Myotis_lucifugus
ENSMFAG00000041068	TARBP1	100	93.222	ENSNLEG00000002518	TARBP1	100	93.161	Nomascus_leucogenys
ENSMFAG00000041068	TARBP1	67	77.966	ENSMEUG00000011370	-	67	77.966	Notamacropus_eugenii
ENSMFAG00000041068	TARBP1	75	86.567	ENSOPRG00000013822	TARBP1	71	86.567	Ochotona_princeps
ENSMFAG00000041068	TARBP1	99	72.354	ENSODEG00000005238	TARBP1	99	72.267	Octodon_degus
ENSMFAG00000041068	TARBP1	87	44.881	ENSONIG00000009789	si:dkey-85a20.4	99	44.881	Oreochromis_niloticus
ENSMFAG00000041068	TARBP1	100	81.936	ENSOCUG00000017418	TARBP1	99	82.121	Oryctolagus_cuniculus
ENSMFAG00000041068	TARBP1	99	39.394	ENSORLG00000010529	si:dkey-85a20.4	88	41.455	Oryzias_latipes
ENSMFAG00000041068	TARBP1	99	39.117	ENSORLG00020019264	si:dkey-85a20.4	88	41.261	Oryzias_latipes_hni
ENSMFAG00000041068	TARBP1	99	39.201	ENSORLG00015003276	si:dkey-85a20.4	87	41.432	Oryzias_latipes_hsok
ENSMFAG00000041068	TARBP1	99	81.223	ENSOGAG00000002379	TARBP1	100	81.099	Otolemur_garnettii
ENSMFAG00000041068	TARBP1	98	81.089	ENSOARG00000003434	TARBP1	99	81.154	Ovis_aries
ENSMFAG00000041068	TARBP1	85	94.359	ENSPPAG00000028097	TARBP1	100	94.359	Pan_paniscus
ENSMFAG00000041068	TARBP1	99	74.658	ENSPPRG00000013561	TARBP1	99	72.637	Panthera_pardus
ENSMFAG00000041068	TARBP1	84	82.972	ENSPTIG00000009281	TARBP1	99	82.972	Panthera_tigris_altaica
ENSMFAG00000041068	TARBP1	100	93.046	ENSPTRG00000002124	TARBP1	100	92.923	Pan_troglodytes
ENSMFAG00000041068	TARBP1	100	97.946	ENSPANG00000021933	TARBP1	100	97.946	Papio_anubis
ENSMFAG00000041068	TARBP1	100	42.406	ENSPKIG00000016716	si:dkey-85a20.4	85	45.626	Paramormyrops_kingsleyae
ENSMFAG00000041068	TARBP1	80	68.009	ENSPSIG00000010699	TARBP1	100	68.087	Pelodiscus_sinensis
ENSMFAG00000041068	TARBP1	97	73.747	ENSPEMG00000006888	Tarbp1	99	74.209	Peromyscus_maniculatus_bairdii
ENSMFAG00000041068	TARBP1	91	83.495	ENSPCIG00000029710	TARBP1	99	83.495	Phascolarctos_cinereus
ENSMFAG00000041068	TARBP1	87	43.961	ENSPFOG00000013020	si:dkey-85a20.4	99	44.031	Poecilia_formosa
ENSMFAG00000041068	TARBP1	99	40.961	ENSPLAG00000006044	si:dkey-85a20.4	85	43.890	Poecilia_latipinna
ENSMFAG00000041068	TARBP1	99	40.616	ENSPMEG00000017857	si:dkey-85a20.4	85	43.763	Poecilia_mexicana
ENSMFAG00000041068	TARBP1	94	41.979	ENSPREG00000022753	si:dkey-85a20.4	85	43.759	Poecilia_reticulata
ENSMFAG00000041068	TARBP1	92	98.016	ENSPPYG00000000102	TARBP1	100	98.016	Pongo_abelii
ENSMFAG00000041068	TARBP1	85	93.333	ENSPCAG00000004808	TARBP1	85	93.333	Procavia_capensis
ENSMFAG00000041068	TARBP1	99	85.254	ENSPCOG00000005666	TARBP1	99	85.183	Propithecus_coquereli
ENSMFAG00000041068	TARBP1	98	68.610	ENSPVAG00000014798	TARBP1	97	68.610	Pteropus_vampyrus
ENSMFAG00000041068	TARBP1	94	42.260	ENSPNYG00000019135	si:dkey-85a20.4	85	43.949	Pundamilia_nyererei
ENSMFAG00000041068	TARBP1	100	66.853	ENSRNOG00000053574	Tarbp1	99	66.356	Rattus_norvegicus
ENSMFAG00000041068	TARBP1	99	93.715	ENSRBIG00000043362	TARBP1	100	93.715	Rhinopithecus_bieti
ENSMFAG00000041068	TARBP1	100	91.140	ENSRROG00000029527	TARBP1	100	91.078	Rhinopithecus_roxellana
ENSMFAG00000041068	TARBP1	90	92.251	ENSSBOG00000034503	TARBP1	100	92.313	Saimiri_boliviensis_boliviensis
ENSMFAG00000041068	TARBP1	84	73.122	ENSSHAG00000000013	TARBP1	100	73.122	Sarcophilus_harrisii
ENSMFAG00000041068	TARBP1	85	44.571	ENSSFOG00015002660	si:dkey-85a20.4	97	45.787	Scleropages_formosus
ENSMFAG00000041068	TARBP1	92	43.289	ENSSMAG00000007081	si:dkey-85a20.4	88	43.699	Scophthalmus_maximus
ENSMFAG00000041068	TARBP1	99	39.915	ENSSDUG00000023566	si:dkey-85a20.4	86	42.949	Seriola_dumerili
ENSMFAG00000041068	TARBP1	99	42.115	ENSSLDG00000020200	si:dkey-85a20.4	86	44.989	Seriola_lalandi_dorsalis
ENSMFAG00000041068	TARBP1	89	85.219	ENSSARG00000012207	TARBP1	89	85.219	Sorex_araneus
ENSMFAG00000041068	TARBP1	99	63.362	ENSSPUG00000015364	TARBP1	100	63.485	Sphenodon_punctatus
ENSMFAG00000041068	TARBP1	92	43.338	ENSSPAG00000007213	si:dkey-85a20.4	88	44.049	Stegastes_partitus
ENSMFAG00000041068	TARBP1	96	85.573	ENSSSCG00000010160	TARBP1	99	85.573	Sus_scrofa
ENSMFAG00000041068	TARBP1	81	65.928	ENSTGUG00000010214	TARBP1	100	65.928	Taeniopygia_guttata
ENSMFAG00000041068	TARBP1	92	39.646	ENSTNIG00000016586	si:dkey-85a20.4	99	43.560	Tetraodon_nigroviridis
ENSMFAG00000041068	TARBP1	86	91.111	ENSTTRG00000008707	TARBP1	89	91.111	Tursiops_truncatus
ENSMFAG00000041068	TARBP1	83	82.078	ENSUMAG00000006730	TARBP1	99	82.078	Ursus_maritimus
ENSMFAG00000041068	TARBP1	78	91.753	ENSVPAG00000007665	TARBP1	84	91.753	Vicugna_pacos
ENSMFAG00000041068	TARBP1	88	81.986	ENSVVUG00000007460	TARBP1	97	83.020	Vulpes_vulpes
ENSMFAG00000041068	TARBP1	85	54.923	ENSXETG00000016224	tarbp1	99	54.883	Xenopus_tropicalis
ENSMFAG00000041068	TARBP1	79	48.704	ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	Xiphophorus_couchianus
ENSMFAG00000041068	TARBP1	66	43.309	ENSXMAG00000009600	si:dkey-85a20.4	100	43.216	Xiphophorus_maculatus