EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMFAG00000041481 (Gene tree)
Gene ID
102134259
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Macaca_fascicularis
Status
putative
Strand
Plus strand
Length
53549 bases
Position
chr1:188203624-188257172
Accession
102134259
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMFAP00000041576PABPPF00658.182.5e-3111
ENSMFAP00000041571PABPPF00658.182.9e-3111
ENSMFAP00000041576RRM_5PF13893.68.7e-0911
ENSMFAP00000041571RRM_5PF13893.61.1e-0811
ENSMFAP00000041576RRM_1PF00076.221.1e-9114
ENSMFAP00000041576RRM_1PF00076.221.1e-9124
ENSMFAP00000041576RRM_1PF00076.221.1e-9134
ENSMFAP00000041576RRM_1PF00076.221.1e-9144
ENSMFAP00000041571RRM_1PF00076.221.4e-9114
ENSMFAP00000041571RRM_1PF00076.221.4e-9124
ENSMFAP00000041571RRM_1PF00076.221.4e-9134
ENSMFAP00000041571RRM_1PF00076.221.4e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMFAT00000015847PABPC4-2015463XM_005543866ENSMFAP00000041571660 (aa)XP_005543923A0A2K5WWH5
ENSMFAT00000015852PABPC4-2023114XM_005543873ENSMFAP00000041576631 (aa)XP_005543930A0A2K5WWI0
Gene Model
Click here to download ENSMFAG00000041481's gene model file
Pathways
Pathway IDPathway NameSource
mcf03013RNA transportKEGG
mcf03015mRNA surveillance pathwayKEGG
mcf03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000041481's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMFAG00000041481PABPC49976.511ENSMFAG00000004725-9976.339
ENSMFAG00000041481PABPC49767.152ENSMFAG00000040365PABPC1L9967.690
ENSMFAG00000041481PABPC46034.722ENSMFAG00000003692ELAVL39233.735
ENSMFAG00000041481PABPC45876.263ENSMFAG00000028878-9976.263
ENSMFAG00000041481PABPC46030.605ENSMFAG00000040787ELAVL19430.605
ENSMFAG00000041481PABPC45730.189ENSMFAG00000045951TIA18530.189
ENSMFAG00000041481PABPC45830.952ENSMFAG00000039866ELAVL48730.921
ENSMFAG00000041481PABPC49974.103ENSMFAG00000016858PABPC39973.865
ENSMFAG00000041481PABPC45931.579ENSMFAG00000039694ELAVL28934.940
ENSMFAG00000041481PABPC46067.135ENSMFAG00000024561PABPC59666.942
ENSMFAG00000041481PABPC49978.627ENSMFAG00000044845PABPC19978.471
ENSMFAG00000041481PABPC45730.769ENSMFAG00000002789TIAL18735.043
ENSMFAG00000041481PABPC45837.500ENSMFAG00000033084CELF26137.500
ENSMFAG00000041481PABPC49858.531ENSMFAG00000034213-9978.000
ENSMFAG00000041481PABPC45431.481ENSMFAG00000030522HNRNPA05032.450
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMFAG00000041481PABPC410099.848ENSG00000090621PABPC4100100.000Homo_sapiens
ENSMFAG00000041481PABPC49983.360ENSAPOG00000001161pabpc410082.453Acanthochromis_polyacanthus
ENSMFAG00000041481PABPC49857.717ENSAMEG00000015083-9957.395Ailuropoda_melanoleuca
ENSMFAG00000041481PABPC410099.091ENSAMEG00000011535-10099.091Ailuropoda_melanoleuca
ENSMFAG00000041481PABPC410083.594ENSACIG00000023343pabpc410084.219Amphilophus_citrinellus
ENSMFAG00000041481PABPC49983.518ENSAOCG00000021529pabpc410090.807Amphiprion_ocellaris
ENSMFAG00000041481PABPC49983.518ENSAPEG00000019196pabpc410083.750Amphiprion_percula
ENSMFAG00000041481PABPC49982.622ENSATEG00000007402pabpc410082.426Anabas_testudineus
ENSMFAG00000041481PABPC49991.429ENSAPLG00000009729-10091.429Anas_platyrhynchos
ENSMFAG00000041481PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSMFAG00000041481PABPC410099.697ENSANAG00000025079PABPC410099.697Aotus_nancymaae
ENSMFAG00000041481PABPC410083.125ENSACLG00000019558pabpc410083.204Astatotilapia_calliptera
ENSMFAG00000041481PABPC49978.922ENSAMXG00000018779pabpc49979.556Astyanax_mexicanus
ENSMFAG00000041481PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSMFAG00000041481PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSMFAG00000041481PABPC47790.164ENSCJAG00000045953-9290.123Callithrix_jacchus
ENSMFAG00000041481PABPC410099.545ENSCJAG00000002512-10099.545Callithrix_jacchus
ENSMFAG00000041481PABPC410099.366ENSCAFG00000003081PABPC410099.366Canis_familiaris
ENSMFAG00000041481PABPC410099.242ENSCAFG00020004161PABPC410099.242Canis_lupus_dingo
ENSMFAG00000041481PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSMFAG00000041481PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSMFAG00000041481PABPC410099.545ENSTSYG00000006532PABPC410099.545Carlito_syrichta
ENSMFAG00000041481PABPC49999.544ENSCAPG00000015984PABPC410099.544Cavia_aperea
ENSMFAG00000041481PABPC410099.545ENSCPOG00000009552PABPC410099.545Cavia_porcellus
ENSMFAG00000041481PABPC410099.697ENSCCAG00000037306PABPC410099.697Cebus_capucinus
ENSMFAG00000041481PABPC4100100.000ENSCATG00000042164PABPC4100100.000Cercocebus_atys
ENSMFAG00000041481PABPC410099.242ENSCLAG00000011899PABPC410099.242Chinchilla_lanigera
ENSMFAG00000041481PABPC4100100.000ENSCSAG00000001135PABPC4100100.000Chlorocebus_sabaeus
ENSMFAG00000041481PABPC48697.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSMFAG00000041481PABPC49991.746ENSCPBG00000001038PABPC410091.746Chrysemys_picta_bellii
ENSMFAG00000041481PABPC49999.846ENSCANG00000034177PABPC410099.846Colobus_angolensis_palliatus
ENSMFAG00000041481PABPC410097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSMFAG00000041481PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSMFAG00000041481PABPC410082.344ENSCSEG00000000130pabpc410082.426Cynoglossus_semilaevis
ENSMFAG00000041481PABPC49983.625ENSCVAG00000019246pabpc410083.861Cyprinodon_variegatus
ENSMFAG00000041481PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSMFAG00000041481PABPC49999.643ENSDNOG00000018444-10099.643Dasypus_novemcinctus
ENSMFAG00000041481PABPC410097.121ENSDORG00000011581Pabpc410097.121Dipodomys_ordii
ENSMFAG00000041481PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSMFAG00000041481PABPC48665.370ENSETEG00000009172-9965.385Echinops_telfairi
ENSMFAG00000041481PABPC49976.582ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSMFAG00000041481PABPC49776.898ENSEBUG00000013782pabpc49976.108Eptatretus_burgeri
ENSMFAG00000041481PABPC410099.697ENSEASG00005014119PABPC410099.697Equus_asinus_asinus
ENSMFAG00000041481PABPC410099.697ENSECAG00000009396PABPC410099.697Equus_caballus
ENSMFAG00000041481PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSMFAG00000041481PABPC49983.599ENSELUG00000003195pabpc49884.177Esox_lucius
ENSMFAG00000041481PABPC410099.394ENSFCAG00000015254-10099.394Felis_catus
ENSMFAG00000041481PABPC49990.952ENSFALG00000000543PABPC410090.952Ficedula_albicollis
ENSMFAG00000041481PABPC410099.545ENSFDAG00000020016-10099.545Fukomys_damarensis
ENSMFAG00000041481PABPC49067.490ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSMFAG00000041481PABPC410083.412ENSFHEG00000007548pabpc49688.578Fundulus_heteroclitus
ENSMFAG00000041481PABPC49982.965ENSGMOG00000019025pabpc49983.596Gadus_morhua
ENSMFAG00000041481PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSMFAG00000041481PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSMFAG00000041481PABPC410081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSMFAG00000041481PABPC49991.587ENSGAGG00000001888PABPC410091.587Gopherus_agassizii
ENSMFAG00000041481PABPC410099.848ENSGGOG00000004002PABPC410099.848Gorilla_gorilla
ENSMFAG00000041481PABPC410083.281ENSHBUG00000020206pabpc410083.359Haplochromis_burtoni
ENSMFAG00000041481PABPC410099.697ENSHGLG00000011162PABPC410099.697Heterocephalus_glaber_female
ENSMFAG00000041481PABPC410099.683ENSHGLG00100001580PABPC410099.683Heterocephalus_glaber_male
ENSMFAG00000041481PABPC410082.316ENSHCOG00000012694pabpc410082.942Hippocampus_comes
ENSMFAG00000041481PABPC49883.146ENSIPUG00000016620pabpc49983.176Ictalurus_punctatus
ENSMFAG00000041481PABPC410097.121ENSSTOG00000010416PABPC410097.121Ictidomys_tridecemlineatus
ENSMFAG00000041481PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSMFAG00000041481PABPC49982.677ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSMFAG00000041481PABPC410082.582ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSMFAG00000041481PABPC49988.170ENSLACG00000011907PABPC410088.170Latimeria_chalumnae
ENSMFAG00000041481PABPC49985.512ENSLOCG00000001877pabpc49986.299Lepisosteus_oculatus
ENSMFAG00000041481PABPC410099.242ENSLAFG00000000151PABPC410099.242Loxodonta_africana
ENSMFAG00000041481PABPC4100100.000ENSMMUG00000007497PABPC4100100.000Macaca_mulatta
ENSMFAG00000041481PABPC410099.848ENSMNEG00000043054PABPC410099.848Macaca_nemestrina
ENSMFAG00000041481PABPC4100100.000ENSMLEG00000040716PABPC4100100.000Mandrillus_leucophaeus
ENSMFAG00000041481PABPC49983.201ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSMFAG00000041481PABPC410082.969ENSMZEG00005006141pabpc410083.048Maylandia_zebra
ENSMFAG00000041481PABPC49987.905ENSMGAG00000005408PABPC410087.905Meleagris_gallopavo
ENSMFAG00000041481PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSMFAG00000041481PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSMFAG00000041481PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSMFAG00000041481PABPC49984.725ENSMICG00000036729-10085.435Microcebus_murinus
ENSMFAG00000041481PABPC48996.619ENSMICG00000016633-10096.619Microcebus_murinus
ENSMFAG00000041481PABPC410097.892ENSMOCG00000006763Pabpc410097.892Microtus_ochrogaster
ENSMFAG00000041481PABPC410080.346ENSMMOG00000002363pabpc49979.507Mola_mola
ENSMFAG00000041481PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSMFAG00000041481PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSMFAG00000041481PABPC49982.780ENSMALG00000011017pabpc410082.326Monopterus_albus
ENSMFAG00000041481PABPC49983.898MGP_CAROLIEiJ_G0024864-10083.898Mus_caroli
ENSMFAG00000041481PABPC410097.576MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSMFAG00000041481PABPC410098.030ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSMFAG00000041481PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSMFAG00000041481PABPC49978.752MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSMFAG00000041481PABPC49553.808ENSMPUG00000006836-10053.642Mustela_putorius_furo
ENSMFAG00000041481PABPC410099.394ENSMPUG00000014414-10099.394Mustela_putorius_furo
ENSMFAG00000041481PABPC410096.672ENSMLUG00000012068PABPC410096.672Myotis_lucifugus
ENSMFAG00000041481PABPC410096.970ENSNGAG00000018292Pabpc410096.970Nannospalax_galili
ENSMFAG00000041481PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSMFAG00000041481PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSMFAG00000041481PABPC4100100.000ENSNLEG00000011928PABPC4100100.000Nomascus_leucogenys
ENSMFAG00000041481PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSMFAG00000041481PABPC410098.636ENSODEG00000006592-10098.636Octodon_degus
ENSMFAG00000041481PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSMFAG00000041481PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSMFAG00000041481PABPC410083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSMFAG00000041481PABPC49991.429ENSOANG00000010001PABPC410091.429Ornithorhynchus_anatinus
ENSMFAG00000041481PABPC49699.367ENSOCUG00000000562PABPC48899.367Oryctolagus_cuniculus
ENSMFAG00000041481PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSMFAG00000041481PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSMFAG00000041481PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSMFAG00000041481PABPC49983.201ENSOMEG00000014410pabpc49983.648Oryzias_melastigma
ENSMFAG00000041481PABPC410096.983ENSOGAG00000004067PABPC410096.983Otolemur_garnettii
ENSMFAG00000041481PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSMFAG00000041481PABPC410099.848ENSPPAG00000043625PABPC410099.848Pan_paniscus
ENSMFAG00000041481PABPC410099.394ENSPPRG00000024727PABPC410099.394Panthera_pardus
ENSMFAG00000041481PABPC410099.394ENSPTIG00000005829PABPC410099.394Panthera_tigris_altaica
ENSMFAG00000041481PABPC410099.848ENSPTRG00000000573PABPC410099.848Pan_troglodytes
ENSMFAG00000041481PABPC410099.848ENSPANG00000009484PABPC410099.848Papio_anubis
ENSMFAG00000041481PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSMFAG00000041481PABPC49991.746ENSPSIG00000016892PABPC410091.746Pelodiscus_sinensis
ENSMFAG00000041481PABPC410081.732ENSPMGG00000009073pabpc49981.476Periophthalmus_magnuspinnatus
ENSMFAG00000041481PABPC410097.424ENSPEMG00000023569-9997.424Peromyscus_maniculatus_bairdii
ENSMFAG00000041481PABPC410091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSMFAG00000041481PABPC48973.484ENSPMAG00000002836pabpc410073.196Petromyzon_marinus
ENSMFAG00000041481PABPC49571.311ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSMFAG00000041481PABPC49794.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSMFAG00000041481PABPC410082.786ENSPFOG00000002682pabpc410082.919Poecilia_formosa
ENSMFAG00000041481PABPC410082.629ENSPLAG00000010112pabpc410083.333Poecilia_latipinna
ENSMFAG00000041481PABPC49983.307ENSPMEG00000019739pabpc410083.075Poecilia_mexicana
ENSMFAG00000041481PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSMFAG00000041481PABPC410099.848ENSPPYG00000001506PABPC410099.848Pongo_abelii
ENSMFAG00000041481PABPC410094.394ENSPCAG00000003341PABPC410094.394Procavia_capensis
ENSMFAG00000041481PABPC410099.697ENSPCOG00000023725-10099.697Propithecus_coquereli
ENSMFAG00000041481PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSMFAG00000041481PABPC49998.824ENSPVAG00000002187PABPC410098.824Pteropus_vampyrus
ENSMFAG00000041481PABPC410083.125ENSPNYG00000006134pabpc410083.204Pundamilia_nyererei
ENSMFAG00000041481PABPC410083.412ENSPNAG00000024355pabpc410084.038Pygocentrus_nattereri
ENSMFAG00000041481PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSMFAG00000041481PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSMFAG00000041481PABPC4100100.000ENSRBIG00000039761PABPC4100100.000Rhinopithecus_bieti
ENSMFAG00000041481PABPC4100100.000ENSRROG00000033355PABPC4100100.000Rhinopithecus_roxellana
ENSMFAG00000041481PABPC410099.545ENSSBOG00000026193PABPC410099.545Saimiri_boliviensis_boliviensis
ENSMFAG00000041481PABPC49892.718ENSSHAG00000018139PABPC410092.222Sarcophilus_harrisii
ENSMFAG00000041481PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSMFAG00000041481PABPC49982.753ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSMFAG00000041481PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSMFAG00000041481PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSMFAG00000041481PABPC410092.121ENSSARG00000000310PABPC410092.121Sorex_araneus
ENSMFAG00000041481PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSMFAG00000041481PABPC49990.562ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSMFAG00000041481PABPC410099.242ENSSSCG00000003660-10099.242Sus_scrofa
ENSMFAG00000041481PABPC48950.337ENSSSCG00000036170-9650.337Sus_scrofa
ENSMFAG00000041481PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSMFAG00000041481PABPC410082.075ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSMFAG00000041481PABPC410078.213ENSTNIG00000016902pabpc49978.213Tetraodon_nigroviridis
ENSMFAG00000041481PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSMFAG00000041481PABPC49983.333ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSMFAG00000041481PABPC410099.208ENSUAMG00000000303PABPC410099.208Ursus_americanus
ENSMFAG00000041481PABPC410099.091ENSUMAG00000019585PABPC410099.107Ursus_maritimus
ENSMFAG00000041481PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSMFAG00000041481PABPC410099.366ENSVVUG00000005215PABPC410099.366Vulpes_vulpes
ENSMFAG00000041481PABPC49983.492ENSXETG00000010946pabpc410083.492Xenopus_tropicalis
ENSMFAG00000041481PABPC45997.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSMFAG00000041481PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSMFAG00000041481PABPC410082.942ENSXMAG00000019007pabpc410083.178Xiphophorus_maculatus

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