EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000041862 (Gene tree)
Gene ID: 102134175
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 32920 bases
Position: chr11:111416975-111449894
Accession: 102134175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000029190	zf-C2H2	PF00096.26	7.1e-19	1	2
ENSMFAP00000029190	zf-C2H2	PF00096.26	7.1e-19	2	2
ENSMFAP00000029190	zf-met	PF12874.7	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000003384	PRDM4-201	4016	XM_005572132	ENSMFAP00000029190	801 (aa)	XP_005572189	A0A2K5VWI1

Gene Model

Click here to download ENSMFAG00000041862's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf04722	Neurotrophin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000041862's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000041862	PRDM4	100	99.750	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSMFAG00000041862	PRDM4	99	97.372	ENSAMEG00000016174	PRDM4	99	97.372	Ailuropoda_melanoleuca
ENSMFAG00000041862	PRDM4	99	87.469	ENSAPLG00000009846	PRDM4	99	86.842	Anas_platyrhynchos
ENSMFAG00000041862	PRDM4	100	99.126	ENSANAG00000024800	PRDM4	100	99.126	Aotus_nancymaae
ENSMFAG00000041862	PRDM4	100	97.253	ENSBTAG00000012999	PRDM4	100	97.253	Bos_taurus
ENSMFAG00000041862	PRDM4	100	98.627	ENSCJAG00000015261	PRDM4	100	98.627	Callithrix_jacchus
ENSMFAG00000041862	PRDM4	100	97.378	ENSCAFG00000001788	PRDM4	100	97.378	Canis_familiaris
ENSMFAG00000041862	PRDM4	100	97.378	ENSCAFG00020004916	PRDM4	100	97.378	Canis_lupus_dingo
ENSMFAG00000041862	PRDM4	100	96.879	ENSCHIG00000019409	PRDM4	100	96.879	Capra_hircus
ENSMFAG00000041862	PRDM4	100	97.628	ENSTSYG00000009248	PRDM4	100	97.628	Carlito_syrichta
ENSMFAG00000041862	PRDM4	99	90.738	ENSCAPG00000013937	PRDM4	99	90.613	Cavia_aperea
ENSMFAG00000041862	PRDM4	99	90.186	ENSCPOG00000022385	PRDM4	100	90.062	Cavia_porcellus
ENSMFAG00000041862	PRDM4	100	99.251	ENSCCAG00000036033	PRDM4	100	99.251	Cebus_capucinus
ENSMFAG00000041862	PRDM4	100	99.625	ENSCATG00000044797	PRDM4	100	99.625	Cercocebus_atys
ENSMFAG00000041862	PRDM4	99	92.786	ENSCLAG00000007545	PRDM4	100	93.159	Chinchilla_lanigera
ENSMFAG00000041862	PRDM4	100	99.875	ENSCSAG00000002896	PRDM4	100	99.875	Chlorocebus_sabaeus
ENSMFAG00000041862	PRDM4	71	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSMFAG00000041862	PRDM4	99	88.457	ENSCPBG00000023187	PRDM4	100	88.080	Chrysemys_picta_bellii
ENSMFAG00000041862	PRDM4	100	99.750	ENSCANG00000021804	PRDM4	100	99.750	Colobus_angolensis_palliatus
ENSMFAG00000041862	PRDM4	99	93.159	ENSCGRG00001015102	-	100	92.786	Cricetulus_griseus_chok1gshd
ENSMFAG00000041862	PRDM4	96	93.161	ENSCGRG00000004044	-	100	92.774	Cricetulus_griseus_crigri
ENSMFAG00000041862	PRDM4	100	96.504	ENSDNOG00000032478	PRDM4	100	96.504	Dasypus_novemcinctus
ENSMFAG00000041862	PRDM4	99	82.183	ENSDORG00000015081	-	100	81.932	Dipodomys_ordii
ENSMFAG00000041862	PRDM4	93	45.938	ENSEBUG00000003775	prdm4	99	45.908	Eptatretus_burgeri
ENSMFAG00000041862	PRDM4	100	97.378	ENSECAG00000015423	PRDM4	100	97.378	Equus_caballus
ENSMFAG00000041862	PRDM4	94	93.342	ENSEEUG00000006569	PRDM4	99	92.943	Erinaceus_europaeus
ENSMFAG00000041862	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.753	Esox_lucius
ENSMFAG00000041862	PRDM4	100	97.878	ENSFCAG00000022478	PRDM4	100	97.878	Felis_catus
ENSMFAG00000041862	PRDM4	99	87.829	ENSFALG00000013342	PRDM4	100	87.327	Ficedula_albicollis
ENSMFAG00000041862	PRDM4	100	87.049	ENSGALG00000012619	PRDM4	100	86.426	Gallus_gallus
ENSMFAG00000041862	PRDM4	99	88.095	ENSGAGG00000002763	PRDM4	95	87.719	Gopherus_agassizii
ENSMFAG00000041862	PRDM4	99	99.625	ENSGGOG00000001244	PRDM4	99	99.625	Gorilla_gorilla
ENSMFAG00000041862	PRDM4	99	93.852	ENSHGLG00000004590	PRDM4	98	93.601	Heterocephalus_glaber_female
ENSMFAG00000041862	PRDM4	99	92.795	ENSHGLG00100007464	PRDM4	100	92.547	Heterocephalus_glaber_male
ENSMFAG00000041862	PRDM4	95	61.399	ENSIPUG00000024162	prdm4	93	61.749	Ictalurus_punctatus
ENSMFAG00000041862	PRDM4	100	96.754	ENSSTOG00000016168	PRDM4	100	96.754	Ictidomys_tridecemlineatus
ENSMFAG00000041862	PRDM4	82	93.280	ENSJJAG00000022448	-	95	93.280	Jaculus_jaculus
ENSMFAG00000041862	PRDM4	99	72.772	ENSLACG00000007452	PRDM4	99	73.020	Latimeria_chalumnae
ENSMFAG00000041862	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSMFAG00000041862	PRDM4	98	96.701	ENSLAFG00000001483	PRDM4	100	96.701	Loxodonta_africana
ENSMFAG00000041862	PRDM4	100	100.000	ENSMMUG00000015550	PRDM4	100	100.000	Macaca_mulatta
ENSMFAG00000041862	PRDM4	100	99.750	ENSMNEG00000032319	PRDM4	100	99.750	Macaca_nemestrina
ENSMFAG00000041862	PRDM4	100	99.875	ENSMLEG00000039607	PRDM4	100	99.875	Mandrillus_leucophaeus
ENSMFAG00000041862	PRDM4	99	79.625	ENSMGAG00000012815	PRDM4	100	79.000	Meleagris_gallopavo
ENSMFAG00000041862	PRDM4	100	96.629	ENSMICG00000007807	PRDM4	100	96.629	Microcebus_murinus
ENSMFAG00000041862	PRDM4	99	94.236	ENSMOCG00000000753	Prdm4	99	93.985	Microtus_ochrogaster
ENSMFAG00000041862	PRDM4	99	94.605	ENSMUSG00000035529	Prdm4	100	94.354	Mus_musculus
ENSMFAG00000041862	PRDM4	99	93.977	MGP_PahariEiJ_G0031398	Prdm4	100	94.028	Mus_pahari
ENSMFAG00000041862	PRDM4	99	95.232	MGP_SPRETEiJ_G0016505	Prdm4	100	95.299	Mus_spretus
ENSMFAG00000041862	PRDM4	99	91.272	ENSMPUG00000012238	PRDM4	99	91.272	Mustela_putorius_furo
ENSMFAG00000041862	PRDM4	99	97.118	ENSMLUG00000000767	PRDM4	99	97.118	Myotis_lucifugus
ENSMFAG00000041862	PRDM4	99	95.734	ENSNGAG00000018627	Prdm4	100	95.734	Nannospalax_galili
ENSMFAG00000041862	PRDM4	100	99.625	ENSNLEG00000006748	PRDM4	100	99.625	Nomascus_leucogenys
ENSMFAG00000041862	PRDM4	89	89.202	ENSMEUG00000004495	PRDM4	89	89.202	Notamacropus_eugenii
ENSMFAG00000041862	PRDM4	88	95.238	ENSOPRG00000010192	PRDM4	89	95.238	Ochotona_princeps
ENSMFAG00000041862	PRDM4	99	90.500	ENSODEG00000014750	PRDM4	99	90.375	Octodon_degus
ENSMFAG00000041862	PRDM4	100	90.886	ENSOANG00000005526	PRDM4	100	90.886	Ornithorhynchus_anatinus
ENSMFAG00000041862	PRDM4	93	96.710	ENSOCUG00000012859	PRDM4	96	96.710	Oryctolagus_cuniculus
ENSMFAG00000041862	PRDM4	99	97.867	ENSOGAG00000011945	PRDM4	100	97.867	Otolemur_garnettii
ENSMFAG00000041862	PRDM4	100	96.629	ENSOARG00000017955	PRDM4	100	96.629	Ovis_aries
ENSMFAG00000041862	PRDM4	100	99.750	ENSPPAG00000038438	PRDM4	100	99.750	Pan_paniscus
ENSMFAG00000041862	PRDM4	100	97.878	ENSPPRG00000004144	PRDM4	100	97.878	Panthera_pardus
ENSMFAG00000041862	PRDM4	100	97.878	ENSPTIG00000005847	PRDM4	100	97.878	Panthera_tigris_altaica
ENSMFAG00000041862	PRDM4	100	99.750	ENSPTRG00000005400	PRDM4	100	99.750	Pan_troglodytes
ENSMFAG00000041862	PRDM4	100	100.000	ENSPANG00000022084	PRDM4	100	100.000	Papio_anubis
ENSMFAG00000041862	PRDM4	99	59.691	ENSPKIG00000000875	prdm4	99	60.404	Paramormyrops_kingsleyae
ENSMFAG00000041862	PRDM4	91	81.559	ENSPSIG00000012066	PRDM4	100	81.559	Pelodiscus_sinensis
ENSMFAG00000041862	PRDM4	99	95.609	ENSPEMG00000014598	Prdm4	100	95.609	Peromyscus_maniculatus_bairdii
ENSMFAG00000041862	PRDM4	100	89.055	ENSPCIG00000009471	PRDM4	100	89.055	Phascolarctos_cinereus
ENSMFAG00000041862	PRDM4	100	99.625	ENSPPYG00000004913	PRDM4	100	99.625	Pongo_abelii
ENSMFAG00000041862	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSMFAG00000041862	PRDM4	100	96.879	ENSPCOG00000021060	PRDM4	100	96.879	Propithecus_coquereli
ENSMFAG00000041862	PRDM4	100	96.883	ENSPVAG00000001596	PRDM4	100	96.883	Pteropus_vampyrus
ENSMFAG00000041862	PRDM4	99	93.985	ENSRNOG00000004962	Prdm4	100	93.734	Rattus_norvegicus
ENSMFAG00000041862	PRDM4	100	99.750	ENSRBIG00000035488	PRDM4	100	99.750	Rhinopithecus_bieti
ENSMFAG00000041862	PRDM4	100	99.875	ENSRROG00000012779	PRDM4	100	99.875	Rhinopithecus_roxellana
ENSMFAG00000041862	PRDM4	100	99.126	ENSSBOG00000000403	PRDM4	100	99.126	Saimiri_boliviensis_boliviensis
ENSMFAG00000041862	PRDM4	99	63.670	ENSSFOG00015023358	prdm4	99	63.670	Scleropages_formosus
ENSMFAG00000041862	PRDM4	100	97.129	ENSSSCG00000000160	PRDM4	100	97.129	Sus_scrofa
ENSMFAG00000041862	PRDM4	99	87.719	ENSTGUG00000010962	-	99	87.218	Taeniopygia_guttata
ENSMFAG00000041862	PRDM4	73	90.102	ENSTBEG00000001732	PRDM4	84	90.102	Tupaia_belangeri
ENSMFAG00000041862	PRDM4	100	96.754	ENSTTRG00000011056	PRDM4	100	96.754	Tursiops_truncatus
ENSMFAG00000041862	PRDM4	100	97.753	ENSUAMG00000022796	PRDM4	100	97.753	Ursus_americanus
ENSMFAG00000041862	PRDM4	100	97.753	ENSUMAG00000017231	PRDM4	100	97.753	Ursus_maritimus
ENSMFAG00000041862	PRDM4	99	97.616	ENSVPAG00000002215	PRDM4	100	97.616	Vicugna_pacos
ENSMFAG00000041862	PRDM4	100	97.378	ENSVVUG00000023397	PRDM4	100	97.378	Vulpes_vulpes