EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000042593 (Gene tree)
Gene ID: -
Gene Symbol: RBM39
Alias: CAPER|CAPERalpha|CC1.3|HCC1|RNPC2|fSAP59
Full Name: RNA binding motif protein 39
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 24268 bases
Position: chr10:67191576-67215843
Accession: 102116609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000030889	RRM_1	PF00076.22	3.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000005096	RBM39-201	1293	XM_015457695	ENSMFAP00000030889	430 (aa)	XP_015313181	A0A2K5W1F2

Gene Model

Click here to download ENSMFAG00000042593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000042593's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000042593	RBM39	95	100.000	ENSG00000131051	RBM39	82	100.000	Homo_sapiens
ENSMFAG00000042593	RBM39	95	100.000	ENSAMEG00000009940	RBM39	82	100.000	Ailuropoda_melanoleuca
ENSMFAG00000042593	RBM39	59	79.216	ENSATEG00000009461	-	67	78.431	Anabas_testudineus
ENSMFAG00000042593	RBM39	95	95.331	ENSAPLG00000003477	RBM39	82	94.942	Anas_platyrhynchos
ENSMFAG00000042593	RBM39	95	94.118	ENSACAG00000006436	RBM39	82	92.941	Anolis_carolinensis
ENSMFAG00000042593	RBM39	95	100.000	ENSANAG00000024610	RBM39	86	100.000	Aotus_nancymaae
ENSMFAG00000042593	RBM39	98	57.500	ENSANAG00000038387	-	52	80.000	Aotus_nancymaae
ENSMFAG00000042593	RBM39	59	76.863	ENSACLG00000014339	-	50	76.863	Astatotilapia_calliptera
ENSMFAG00000042593	RBM39	84	77.255	ENSAMXG00000013781	rbm39a	85	76.863	Astyanax_mexicanus
ENSMFAG00000042593	RBM39	98	78.431	ENSAMXG00000012946	rbm39b	50	78.431	Astyanax_mexicanus
ENSMFAG00000042593	RBM39	95	97.647	ENSBTAG00000003949	RBM39	81	97.647	Bos_taurus
ENSMFAG00000042593	RBM39	95	100.000	ENSCJAG00000017535	RBM39	85	97.647	Callithrix_jacchus
ENSMFAG00000042593	RBM39	95	100.000	ENSCAFG00000008327	RBM39	82	100.000	Canis_familiaris
ENSMFAG00000042593	RBM39	95	100.000	ENSCAFG00020005676	RBM39	82	100.000	Canis_lupus_dingo
ENSMFAG00000042593	RBM39	95	100.000	ENSCHIG00000024884	RBM39	85	100.000	Capra_hircus
ENSMFAG00000042593	RBM39	95	100.000	ENSTSYG00000005605	RBM39	82	100.000	Carlito_syrichta
ENSMFAG00000042593	RBM39	95	64.932	ENSCAPG00000012702	-	52	87.843	Cavia_aperea
ENSMFAG00000042593	RBM39	95	80.537	ENSCPOG00000039333	-	91	80.537	Cavia_porcellus
ENSMFAG00000042593	RBM39	70	89.804	ENSCPOG00000014625	-	82	89.804	Cavia_porcellus
ENSMFAG00000042593	RBM39	84	78.431	ENSCCAG00000035313	-	60	78.431	Cebus_capucinus
ENSMFAG00000042593	RBM39	95	100.000	ENSCCAG00000031689	-	86	100.000	Cebus_capucinus
ENSMFAG00000042593	RBM39	69	84.706	ENSCATG00000030221	-	77	84.706	Cercocebus_atys
ENSMFAG00000042593	RBM39	95	81.208	ENSCATG00000032917	-	91	81.208	Cercocebus_atys
ENSMFAG00000042593	RBM39	95	100.000	ENSCLAG00000016940	RBM39	82	100.000	Chinchilla_lanigera
ENSMFAG00000042593	RBM39	98	67.200	ENSCSAG00000010271	RBM39	100	67.200	Chlorocebus_sabaeus
ENSMFAG00000042593	RBM39	95	94.902	ENSCPBG00000011600	RBM39	82	93.725	Chrysemys_picta_bellii
ENSMFAG00000042593	RBM39	94	59.294	ENSCANG00000022597	-	90	62.037	Colobus_angolensis_palliatus
ENSMFAG00000042593	RBM39	95	97.647	ENSCANG00000031033	-	82	97.647	Colobus_angolensis_palliatus
ENSMFAG00000042593	RBM39	95	100.000	ENSCGRG00001013983	Rbm39	82	100.000	Cricetulus_griseus_chok1gshd
ENSMFAG00000042593	RBM39	95	97.647	ENSCGRG00000015067	Rbm39	82	97.647	Cricetulus_griseus_crigri
ENSMFAG00000042593	RBM39	59	76.863	ENSCSEG00000020394	-	61	66.667	Cynoglossus_semilaevis
ENSMFAG00000042593	RBM39	97	53.233	ENSCSEG00000021307	rbm39b	60	66.667	Cynoglossus_semilaevis
ENSMFAG00000042593	RBM39	59	72.157	ENSCVAG00000014408	-	66	73.725	Cyprinodon_variegatus
ENSMFAG00000042593	RBM39	84	78.161	ENSDARG00000011613	rbm39a	84	78.431	Danio_rerio
ENSMFAG00000042593	RBM39	95	100.000	ENSDNOG00000025219	RBM39	82	100.000	Dasypus_novemcinctus
ENSMFAG00000042593	RBM39	99	100.000	ENSDORG00000000233	Rbm39	84	100.000	Dipodomys_ordii
ENSMFAG00000042593	RBM39	95	76.395	ENSETEG00000016295	RBM39	78	76.395	Echinops_telfairi
ENSMFAG00000042593	RBM39	95	100.000	ENSEASG00005003936	RBM39	87	100.000	Equus_asinus_asinus
ENSMFAG00000042593	RBM39	95	100.000	ENSECAG00000013423	RBM39	82	100.000	Equus_caballus
ENSMFAG00000042593	RBM39	95	89.020	ENSEEUG00000004390	RBM39	82	89.020	Erinaceus_europaeus
ENSMFAG00000042593	RBM39	59	78.988	ENSELUG00000020296	rbm39a	84	78.988	Esox_lucius
ENSMFAG00000042593	RBM39	94	79.608	ENSELUG00000001796	rbm39b	81	79.216	Esox_lucius
ENSMFAG00000042593	RBM39	95	100.000	ENSFCAG00000003233	RBM39	83	100.000	Felis_catus
ENSMFAG00000042593	RBM39	93	94.510	ENSFALG00000012498	RBM39	82	93.333	Ficedula_albicollis
ENSMFAG00000042593	RBM39	59	68.627	ENSFDAG00000007943	-	65	68.627	Fukomys_damarensis
ENSMFAG00000042593	RBM39	98	49.372	ENSFDAG00000015069	-	69	59.760	Fukomys_damarensis
ENSMFAG00000042593	RBM39	59	63.922	ENSFDAG00000021507	-	65	63.922	Fukomys_damarensis
ENSMFAG00000042593	RBM39	95	100.000	ENSFDAG00000021510	-	82	100.000	Fukomys_damarensis
ENSMFAG00000042593	RBM39	59	78.039	ENSGMOG00000017567	-	58	78.039	Gadus_morhua
ENSMFAG00000042593	RBM39	95	94.902	ENSGALG00000001550	RBM39	82	93.725	Gallus_gallus
ENSMFAG00000042593	RBM39	61	76.718	ENSGAFG00000019545	-	70	76.718	Gambusia_affinis
ENSMFAG00000042593	RBM39	59	76.863	ENSGACG00000002797	rbm39b	68	76.863	Gasterosteus_aculeatus
ENSMFAG00000042593	RBM39	95	94.902	ENSGAGG00000015140	RBM39	82	93.725	Gopherus_agassizii
ENSMFAG00000042593	RBM39	59	94.118	ENSGGOG00000036253	-	62	94.118	Gorilla_gorilla
ENSMFAG00000042593	RBM39	95	100.000	ENSGGOG00000003950	RBM39	82	100.000	Gorilla_gorilla
ENSMFAG00000042593	RBM39	59	77.255	ENSHBUG00000009017	-	50	77.255	Haplochromis_burtoni
ENSMFAG00000042593	RBM39	95	100.000	ENSHGLG00000017871	RBM39	82	100.000	Heterocephalus_glaber_female
ENSMFAG00000042593	RBM39	95	55.134	ENSHGLG00000010196	-	93	54.409	Heterocephalus_glaber_female
ENSMFAG00000042593	RBM39	81	78.947	ENSHGLG00000001772	-	67	78.947	Heterocephalus_glaber_female
ENSMFAG00000042593	RBM39	59	71.260	ENSHGLG00100008245	-	69	71.260	Heterocephalus_glaber_male
ENSMFAG00000042593	RBM39	95	97.647	ENSHGLG00100019327	-	82	97.647	Heterocephalus_glaber_male
ENSMFAG00000042593	RBM39	59	77.255	ENSIPUG00000024623	rbm39	85	76.863	Ictalurus_punctatus
ENSMFAG00000042593	RBM39	63	100.000	ENSSTOG00000030698	RBM39	71	100.000	Ictidomys_tridecemlineatus
ENSMFAG00000042593	RBM39	59	94.510	ENSJJAG00000016745	-	70	94.510	Jaculus_jaculus
ENSMFAG00000042593	RBM39	55	89.407	ENSJJAG00000023249	-	53	89.407	Jaculus_jaculus
ENSMFAG00000042593	RBM39	59	77.255	ENSLBEG00000009909	rbm39b	68	77.255	Labrus_bergylta
ENSMFAG00000042593	RBM39	59	78.039	ENSLBEG00000008018	-	67	77.255	Labrus_bergylta
ENSMFAG00000042593	RBM39	59	68.310	ENSLBEG00000018799	-	63	60.651	Labrus_bergylta
ENSMFAG00000042593	RBM39	58	70.000	ENSLACG00000016576	-	66	69.600	Latimeria_chalumnae
ENSMFAG00000042593	RBM39	93	86.275	ENSLACG00000018811	RBM39	81	86.275	Latimeria_chalumnae
ENSMFAG00000042593	RBM39	88	82.353	ENSLOCG00000006562	rbm39a	79	81.609	Lepisosteus_oculatus
ENSMFAG00000042593	RBM39	95	100.000	ENSLAFG00000010346	RBM39	82	100.000	Loxodonta_africana
ENSMFAG00000042593	RBM39	95	100.000	ENSMMUG00000031284	RBM39	90	93.333	Macaca_mulatta
ENSMFAG00000042593	RBM39	95	100.000	ENSMNEG00000040217	RBM39	82	100.000	Macaca_nemestrina
ENSMFAG00000042593	RBM39	59	100.000	ENSMLEG00000031533	-	68	100.000	Mandrillus_leucophaeus
ENSMFAG00000042593	RBM39	83	62.736	ENSMLEG00000030882	-	77	84.314	Mandrillus_leucophaeus
ENSMFAG00000042593	RBM39	59	78.824	ENSMAMG00000009683	-	50	78.740	Mastacembelus_armatus
ENSMFAG00000042593	RBM39	59	76.471	ENSMZEG00005012065	-	50	76.471	Maylandia_zebra
ENSMFAG00000042593	RBM39	95	95.294	ENSMGAG00000001509	RBM39	82	95.294	Meleagris_gallopavo
ENSMFAG00000042593	RBM39	97	100.000	ENSMAUG00000014642	Rbm39	86	100.000	Mesocricetus_auratus
ENSMFAG00000042593	RBM39	95	100.000	ENSMICG00000001668	RBM39	86	100.000	Microcebus_murinus
ENSMFAG00000042593	RBM39	81	90.196	ENSMICG00000035049	-	74	90.196	Microcebus_murinus
ENSMFAG00000042593	RBM39	95	94.510	ENSMOCG00000017326	Rbm39	82	94.510	Microtus_ochrogaster
ENSMFAG00000042593	RBM39	59	76.863	ENSMMOG00000017823	-	67	75.294	Mola_mola
ENSMFAG00000042593	RBM39	95	95.349	ENSMODG00000001557	RBM39	82	95.349	Monodelphis_domestica
ENSMFAG00000042593	RBM39	59	72.763	ENSMALG00000020628	-	51	72.763	Monopterus_albus
ENSMFAG00000042593	RBM39	95	100.000	MGP_CAROLIEiJ_G0024554	Rbm39	82	100.000	Mus_caroli
ENSMFAG00000042593	RBM39	95	100.000	ENSMUSG00000027620	Rbm39	82	100.000	Mus_musculus
ENSMFAG00000042593	RBM39	71	92.806	MGP_PahariEiJ_G0025999	Rbm39	78	92.806	Mus_pahari
ENSMFAG00000042593	RBM39	95	100.000	MGP_SPRETEiJ_G0025476	Rbm39	82	100.000	Mus_spretus
ENSMFAG00000042593	RBM39	95	100.000	ENSMPUG00000017786	RBM39	82	100.000	Mustela_putorius_furo
ENSMFAG00000042593	RBM39	95	97.266	ENSMLUG00000003000	RBM39	82	97.266	Myotis_lucifugus
ENSMFAG00000042593	RBM39	95	100.000	ENSNGAG00000016684	Rbm39	82	100.000	Nannospalax_galili
ENSMFAG00000042593	RBM39	59	76.078	ENSNBRG00000017035	rbm39b	51	76.078	Neolamprologus_brichardi
ENSMFAG00000042593	RBM39	59	76.471	ENSNBRG00000007057	-	53	76.471	Neolamprologus_brichardi
ENSMFAG00000042593	RBM39	95	86.232	ENSNLEG00000010350	-	90	86.341	Nomascus_leucogenys
ENSMFAG00000042593	RBM39	93	59.865	ENSNLEG00000036235	-	88	56.071	Nomascus_leucogenys
ENSMFAG00000042593	RBM39	84	77.041	ENSOPRG00000002183	RBM39	80	77.041	Ochotona_princeps
ENSMFAG00000042593	RBM39	95	99.216	ENSODEG00000000850	-	83	99.216	Octodon_degus
ENSMFAG00000042593	RBM39	97	100.000	ENSODEG00000013774	-	82	100.000	Octodon_degus
ENSMFAG00000042593	RBM39	59	72.656	ENSONIG00000000274	-	50	72.656	Oreochromis_niloticus
ENSMFAG00000042593	RBM39	63	54.634	ENSOANG00000006045	-	65	54.854	Ornithorhynchus_anatinus
ENSMFAG00000042593	RBM39	97	100.000	ENSOCUG00000007050	RBM39	72	100.000	Oryctolagus_cuniculus
ENSMFAG00000042593	RBM39	59	77.255	ENSORLG00020006098	-	50	76.863	Oryzias_latipes_hni
ENSMFAG00000042593	RBM39	59	73.764	ENSOMEG00000001685	-	62	65.079	Oryzias_melastigma
ENSMFAG00000042593	RBM39	98	91.373	ENSOGAG00000027149	-	82	91.373	Otolemur_garnettii
ENSMFAG00000042593	RBM39	95	95.238	ENSOGAG00000011227	-	86	94.526	Otolemur_garnettii
ENSMFAG00000042593	RBM39	95	96.875	ENSOARG00000014859	RBM39	82	96.875	Ovis_aries
ENSMFAG00000042593	RBM39	95	100.000	ENSPPAG00000029710	-	83	100.000	Pan_paniscus
ENSMFAG00000042593	RBM39	98	67.489	ENSPPAG00000041179	-	58	94.118	Pan_paniscus
ENSMFAG00000042593	RBM39	95	100.000	ENSPPRG00000002157	RBM39	82	100.000	Panthera_pardus
ENSMFAG00000042593	RBM39	95	99.216	ENSPTIG00000009580	RBM39	82	99.216	Panthera_tigris_altaica
ENSMFAG00000042593	RBM39	95	100.000	ENSPTRG00000049720	-	83	100.000	Pan_troglodytes
ENSMFAG00000042593	RBM39	59	94.118	ENSPTRG00000049437	-	58	94.118	Pan_troglodytes
ENSMFAG00000042593	RBM39	59	94.118	ENSPTRG00000046501	-	81	94.118	Pan_troglodytes
ENSMFAG00000042593	RBM39	95	100.000	ENSPTRG00000045535	-	83	100.000	Pan_troglodytes
ENSMFAG00000042593	RBM39	95	100.000	ENSPANG00000021248	RBM39	85	100.000	Papio_anubis
ENSMFAG00000042593	RBM39	85	80.970	ENSPKIG00000017145	rbm39a	82	80.970	Paramormyrops_kingsleyae
ENSMFAG00000042593	RBM39	59	81.250	ENSPKIG00000007461	-	65	74.118	Paramormyrops_kingsleyae
ENSMFAG00000042593	RBM39	95	93.077	ENSPSIG00000017885	RBM39	82	93.077	Pelodiscus_sinensis
ENSMFAG00000042593	RBM39	59	74.118	ENSPMGG00000021264	-	66	72.941	Periophthalmus_magnuspinnatus
ENSMFAG00000042593	RBM39	95	100.000	ENSPEMG00000021887	Rbm39	82	100.000	Peromyscus_maniculatus_bairdii
ENSMFAG00000042593	RBM39	95	95.294	ENSPCIG00000027946	RBM39	83	95.294	Phascolarctos_cinereus
ENSMFAG00000042593	RBM39	59	76.863	ENSPFOG00000012350	-	50	76.863	Poecilia_formosa
ENSMFAG00000042593	RBM39	59	74.510	ENSPLAG00000013925	-	81	62.733	Poecilia_latipinna
ENSMFAG00000042593	RBM39	59	76.863	ENSPMEG00000002750	-	53	76.863	Poecilia_mexicana
ENSMFAG00000042593	RBM39	59	76.863	ENSPREG00000021088	-	80	63.125	Poecilia_reticulata
ENSMFAG00000042593	RBM39	95	100.000	ENSPPYG00000010963	RBM39	82	100.000	Pongo_abelii
ENSMFAG00000042593	RBM39	98	100.000	ENSPCAG00000008764	RBM39	83	100.000	Procavia_capensis
ENSMFAG00000042593	RBM39	59	83.922	ENSPCOG00000025238	-	67	83.922	Propithecus_coquereli
ENSMFAG00000042593	RBM39	95	100.000	ENSPCOG00000027976	-	82	100.000	Propithecus_coquereli
ENSMFAG00000042593	RBM39	95	100.000	ENSPVAG00000014944	RBM39	82	100.000	Pteropus_vampyrus
ENSMFAG00000042593	RBM39	59	75.191	ENSPNYG00000010982	-	77	66.667	Pundamilia_nyererei
ENSMFAG00000042593	RBM39	94	57.995	ENSPNAG00000007787	rbm39b	50	78.431	Pygocentrus_nattereri
ENSMFAG00000042593	RBM39	59	76.863	ENSPNAG00000007852	rbm39a	83	74.427	Pygocentrus_nattereri
ENSMFAG00000042593	RBM39	95	97.647	ENSRNOG00000019848	Rbm39	82	97.647	Rattus_norvegicus
ENSMFAG00000042593	RBM39	95	97.647	ENSRNOG00000049814	LOC100910882	82	97.647	Rattus_norvegicus
ENSMFAG00000042593	RBM39	95	100.000	ENSRBIG00000044413	-	82	100.000	Rhinopithecus_bieti
ENSMFAG00000042593	RBM39	94	85.547	ENSRBIG00000013669	-	83	85.547	Rhinopithecus_bieti
ENSMFAG00000042593	RBM39	95	100.000	ENSRROG00000037484	RBM39	82	100.000	Rhinopithecus_roxellana
ENSMFAG00000042593	RBM39	59	77.647	ENSSBOG00000031847	-	50	77.647	Saimiri_boliviensis_boliviensis
ENSMFAG00000042593	RBM39	95	85.882	ENSSBOG00000025642	-	81	85.882	Saimiri_boliviensis_boliviensis
ENSMFAG00000042593	RBM39	95	95.294	ENSSHAG00000018608	RBM39	82	95.294	Sarcophilus_harrisii
ENSMFAG00000042593	RBM39	87	81.413	ENSSFOG00015003597	rbm39	86	81.413	Scleropages_formosus
ENSMFAG00000042593	RBM39	59	79.845	ENSSFOG00015017280	-	51	79.845	Scleropages_formosus
ENSMFAG00000042593	RBM39	59	68.456	ENSSDUG00000018191	-	56	57.432	Seriola_dumerili
ENSMFAG00000042593	RBM39	59	71.329	ENSSLDG00000022188	-	55	71.479	Seriola_lalandi_dorsalis
ENSMFAG00000042593	RBM39	83	100.000	ENSSARG00000007673	RBM39	72	100.000	Sorex_araneus
ENSMFAG00000042593	RBM39	59	93.725	ENSSPUG00000012393	RBM39	67	92.549	Sphenodon_punctatus
ENSMFAG00000042593	RBM39	59	80.000	ENSSPAG00000021798	-	50	79.762	Stegastes_partitus
ENSMFAG00000042593	RBM39	95	100.000	ENSSSCG00000007309	RBM39	83	100.000	Sus_scrofa
ENSMFAG00000042593	RBM39	95	94.922	ENSTGUG00000003048	RBM39	82	94.922	Taeniopygia_guttata
ENSMFAG00000042593	RBM39	59	76.863	ENSTNIG00000017904	rbm39b	55	76.863	Tetraodon_nigroviridis
ENSMFAG00000042593	RBM39	59	86.275	ENSTBEG00000017320	RBM39	51	86.275	Tupaia_belangeri
ENSMFAG00000042593	RBM39	95	100.000	ENSTTRG00000017039	RBM39	82	100.000	Tursiops_truncatus
ENSMFAG00000042593	RBM39	95	100.000	ENSUAMG00000010443	RBM39	82	100.000	Ursus_americanus
ENSMFAG00000042593	RBM39	95	100.000	ENSUMAG00000004302	RBM39	82	100.000	Ursus_maritimus
ENSMFAG00000042593	RBM39	88	86.486	ENSVPAG00000003819	RBM39	81	86.486	Vicugna_pacos
ENSMFAG00000042593	RBM39	95	100.000	ENSVVUG00000001290	RBM39	83	100.000	Vulpes_vulpes
ENSMFAG00000042593	RBM39	83	83.824	ENSXETG00000007434	rbm39	83	84.559	Xenopus_tropicalis
ENSMFAG00000042593	RBM39	59	71.206	ENSXCOG00000017255	-	67	70.980	Xiphophorus_couchianus
ENSMFAG00000042593	RBM39	59	69.020	ENSXMAG00000012463	-	66	68.482	Xiphophorus_maculatus