EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000042606 (Gene tree)
Gene ID: 101866351
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 84158 bases
Position: chr5:93453673-93537830
Accession: 101866351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000030992	ResIII	PF04851.15	2.6e-10	1	1
ENSMFAP00000030977	ResIII	PF04851.15	3.3e-10	1	1
ENSMFAP00000030988	ResIII	PF04851.15	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000005187	SMARCAD1-201	5170	XM_005555446	ENSMFAP00000030977	1026 (aa)	XP_005555503	A0A2K5W1P6
ENSMFAT00000005198	SMARCAD1-202	5149	XM_005555447	ENSMFAP00000030988	1026 (aa)	XP_005555504	A0A2K5W1P6
ENSMFAT00000005202	SMARCAD1-203	5166	XM_005555450	ENSMFAP00000030992	889 (aa)	XP_005555507	A0A2K5W1R0

Gene Model

Click here to download ENSMFAG00000042606's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000042606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000042606	SMARCAD1	59	37.660	ENSMFAG00000044053	HELLS	77	37.705
ENSMFAG00000042606	SMARCAD1	57	35.907	ENSMFAG00000032830	CHD6	77	31.078
ENSMFAG00000042606	SMARCAD1	57	36.364	ENSMFAG00000043562	CHD1L	51	36.364
ENSMFAG00000042606	SMARCAD1	56	33.143	ENSMFAG00000031629	-	67	33.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000042606	SMARCAD1	100	99.438	ENSG00000163104	SMARCAD1	100	100.000	Homo_sapiens
ENSMFAG00000042606	SMARCAD1	97	62.890	ENSAPOG00000011446	smarcad1a	88	61.507	Acanthochromis_polyacanthus
ENSMFAG00000042606	SMARCAD1	100	97.755	ENSAMEG00000005844	SMARCAD1	100	97.082	Ailuropoda_melanoleuca
ENSMFAG00000042606	SMARCAD1	78	68.587	ENSACIG00000018326	smarcad1a	100	68.587	Amphilophus_citrinellus
ENSMFAG00000042606	SMARCAD1	100	62.748	ENSAOCG00000019762	smarcad1a	99	62.748	Amphiprion_ocellaris
ENSMFAG00000042606	SMARCAD1	100	62.890	ENSAPEG00000003889	smarcad1a	96	62.483	Amphiprion_percula
ENSMFAG00000042606	SMARCAD1	98	62.921	ENSATEG00000015608	smarcad1a	93	62.921	Anabas_testudineus
ENSMFAG00000042606	SMARCAD1	98	75.599	ENSAPLG00000004630	SMARCAD1	100	72.887	Anas_platyrhynchos
ENSMFAG00000042606	SMARCAD1	98	75.172	ENSACAG00000013554	SMARCAD1	100	70.320	Anolis_carolinensis
ENSMFAG00000042606	SMARCAD1	100	98.541	ENSANAG00000020488	SMARCAD1	100	98.541	Aotus_nancymaae
ENSMFAG00000042606	SMARCAD1	98	62.500	ENSACLG00000017063	smarcad1a	99	61.308	Astatotilapia_calliptera
ENSMFAG00000042606	SMARCAD1	81	60.251	ENSAMXG00000015470	smarcad1a	99	60.251	Astyanax_mexicanus
ENSMFAG00000042606	SMARCAD1	89	59.063	ENSAMXG00000019130	smarcad1b	85	59.649	Astyanax_mexicanus
ENSMFAG00000042606	SMARCAD1	100	96.749	ENSBTAG00000017061	SMARCAD1	100	96.307	Bos_taurus
ENSMFAG00000042606	SMARCAD1	68	43.627	WBGene00010845	M03C11.8	70	40.506	Caenorhabditis_elegans
ENSMFAG00000042606	SMARCAD1	100	98.830	ENSCJAG00000006778	SMARCAD1	100	98.830	Callithrix_jacchus
ENSMFAG00000042606	SMARCAD1	99	97.743	ENSCAFG00000010026	SMARCAD1	100	96.595	Canis_familiaris
ENSMFAG00000042606	SMARCAD1	99	97.853	ENSCAFG00020003994	SMARCAD1	99	97.853	Canis_lupus_dingo
ENSMFAG00000042606	SMARCAD1	100	97.306	ENSCHIG00000012905	SMARCAD1	100	96.790	Capra_hircus
ENSMFAG00000042606	SMARCAD1	100	98.090	ENSTSYG00000002706	SMARCAD1	100	97.468	Carlito_syrichta
ENSMFAG00000042606	SMARCAD1	96	80.653	ENSCAPG00000016744	SMARCAD1	96	78.772	Cavia_aperea
ENSMFAG00000042606	SMARCAD1	100	95.951	ENSCPOG00000011398	SMARCAD1	100	94.477	Cavia_porcellus
ENSMFAG00000042606	SMARCAD1	100	98.830	ENSCCAG00000022264	SMARCAD1	100	99.664	Cebus_capucinus
ENSMFAG00000042606	SMARCAD1	100	99.775	ENSCATG00000035663	SMARCAD1	100	99.775	Cercocebus_atys
ENSMFAG00000042606	SMARCAD1	94	99.881	ENSCSAG00000004186	SMARCAD1	100	99.881	Chlorocebus_sabaeus
ENSMFAG00000042606	SMARCAD1	99	78.491	ENSCPBG00000013203	SMARCAD1	100	74.159	Chrysemys_picta_bellii
ENSMFAG00000042606	SMARCAD1	74	49.700	ENSCING00000001688	-	99	49.700	Ciona_intestinalis
ENSMFAG00000042606	SMARCAD1	100	99.663	ENSCANG00000003556	SMARCAD1	100	100.000	Colobus_angolensis_palliatus
ENSMFAG00000042606	SMARCAD1	99	94.131	ENSCGRG00001015056	Smarcad1	100	93.080	Cricetulus_griseus_chok1gshd
ENSMFAG00000042606	SMARCAD1	99	94.131	ENSCGRG00000014087	Smarcad1	100	93.080	Cricetulus_griseus_crigri
ENSMFAG00000042606	SMARCAD1	100	60.776	ENSCSEG00000014419	-	96	59.041	Cynoglossus_semilaevis
ENSMFAG00000042606	SMARCAD1	100	62.536	ENSCSEG00000017903	smarcad1a	100	46.872	Cynoglossus_semilaevis
ENSMFAG00000042606	SMARCAD1	98	54.476	ENSDARG00000014041	smarcad1a	92	55.678	Danio_rerio
ENSMFAG00000042606	SMARCAD1	90	57.934	ENSDARG00000073721	smarcad1b	82	59.137	Danio_rerio
ENSMFAG00000042606	SMARCAD1	100	96.101	ENSDNOG00000000806	-	100	96.101	Dasypus_novemcinctus
ENSMFAG00000042606	SMARCAD1	100	94.488	ENSDORG00000012331	Smarcad1	100	92.809	Dipodomys_ordii
ENSMFAG00000042606	SMARCAD1	72	45.538	FBgn0032157	Etl1	92	39.688	Drosophila_melanogaster
ENSMFAG00000042606	SMARCAD1	71	45.552	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSMFAG00000042606	SMARCAD1	100	97.868	ENSEASG00005012382	SMARCAD1	100	97.179	Equus_asinus_asinus
ENSMFAG00000042606	SMARCAD1	100	97.868	ENSECAG00000011562	SMARCAD1	100	97.179	Equus_caballus
ENSMFAG00000042606	SMARCAD1	99	55.936	ENSELUG00000018535	smarcad1a	100	50.975	Esox_lucius
ENSMFAG00000042606	SMARCAD1	91	57.074	ENSELUG00000019154	smarcad1b	79	58.951	Esox_lucius
ENSMFAG00000042606	SMARCAD1	100	97.753	ENSFCAG00000003958	SMARCAD1	100	98.993	Felis_catus
ENSMFAG00000042606	SMARCAD1	98	73.774	ENSFALG00000006089	SMARCAD1	100	67.341	Ficedula_albicollis
ENSMFAG00000042606	SMARCAD1	100	96.625	ENSFDAG00000017027	SMARCAD1	100	95.906	Fukomys_damarensis
ENSMFAG00000042606	SMARCAD1	94	65.321	ENSFHEG00000012778	smarcad1a	92	62.483	Fundulus_heteroclitus
ENSMFAG00000042606	SMARCAD1	99	56.872	ENSGMOG00000018995	smarcad1a	99	56.648	Gadus_morhua
ENSMFAG00000042606	SMARCAD1	88	73.957	ENSGALG00000037339	SMARCAD1	94	74.585	Gallus_gallus
ENSMFAG00000042606	SMARCAD1	90	66.667	ENSGAFG00000013498	smarcad1a	60	66.667	Gambusia_affinis
ENSMFAG00000042606	SMARCAD1	98	58.163	ENSGACG00000007327	smarcad1a	99	58.050	Gasterosteus_aculeatus
ENSMFAG00000042606	SMARCAD1	99	78.507	ENSGAGG00000008582	SMARCAD1	100	74.035	Gopherus_agassizii
ENSMFAG00000042606	SMARCAD1	100	99.550	ENSGGOG00000023001	SMARCAD1	100	99.220	Gorilla_gorilla
ENSMFAG00000042606	SMARCAD1	98	62.358	ENSHBUG00000011042	smarcad1a	99	61.172	Haplochromis_burtoni
ENSMFAG00000042606	SMARCAD1	100	96.625	ENSHGLG00000005070	SMARCAD1	100	95.821	Heterocephalus_glaber_female
ENSMFAG00000042606	SMARCAD1	100	96.625	ENSHGLG00100006812	SMARCAD1	100	95.821	Heterocephalus_glaber_male
ENSMFAG00000042606	SMARCAD1	99	63.764	ENSHCOG00000007848	smarcad1a	98	59.306	Hippocampus_comes
ENSMFAG00000042606	SMARCAD1	93	56.683	ENSIPUG00000022817	smarcad1b	99	51.685	Ictalurus_punctatus
ENSMFAG00000042606	SMARCAD1	87	65.102	ENSIPUG00000000242	smarcad1a	95	52.341	Ictalurus_punctatus
ENSMFAG00000042606	SMARCAD1	100	97.079	ENSSTOG00000001227	SMARCAD1	100	96.981	Ictidomys_tridecemlineatus
ENSMFAG00000042606	SMARCAD1	100	96.288	ENSJJAG00000022342	Smarcad1	100	95.614	Jaculus_jaculus
ENSMFAG00000042606	SMARCAD1	90	64.350	ENSKMAG00000021351	smarcad1a	81	61.615	Kryptolebias_marmoratus
ENSMFAG00000042606	SMARCAD1	91	65.821	ENSLBEG00000008088	smarcad1a	79	65.821	Labrus_bergylta
ENSMFAG00000042606	SMARCAD1	100	58.895	ENSLOCG00000012909	smarcad1a	100	55.342	Lepisosteus_oculatus
ENSMFAG00000042606	SMARCAD1	100	94.826	ENSLAFG00000000040	SMARCAD1	100	94.639	Loxodonta_africana
ENSMFAG00000042606	SMARCAD1	100	100.000	ENSMMUG00000022242	SMARCAD1	100	100.000	Macaca_mulatta
ENSMFAG00000042606	SMARCAD1	100	99.903	ENSMNEG00000038117	SMARCAD1	100	99.903	Macaca_nemestrina
ENSMFAG00000042606	SMARCAD1	100	99.775	ENSMLEG00000038333	SMARCAD1	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000042606	SMARCAD1	98	63.738	ENSMAMG00000000933	smarcad1a	96	63.561	Mastacembelus_armatus
ENSMFAG00000042606	SMARCAD1	98	62.500	ENSMZEG00005005203	smarcad1a	100	49.498	Maylandia_zebra
ENSMFAG00000042606	SMARCAD1	99	67.377	ENSMGAG00000005577	SMARCAD1	100	65.123	Meleagris_gallopavo
ENSMFAG00000042606	SMARCAD1	99	94.018	ENSMAUG00000008417	Smarcad1	100	92.885	Mesocricetus_auratus
ENSMFAG00000042606	SMARCAD1	100	97.197	ENSMICG00000009746	SMARCAD1	100	96.696	Microcebus_murinus
ENSMFAG00000042606	SMARCAD1	100	93.813	ENSMOCG00000017142	Smarcad1	100	92.885	Microtus_ochrogaster
ENSMFAG00000042606	SMARCAD1	89	58.491	ENSMMOG00000000275	smarcad1a	92	64.382	Mola_mola
ENSMFAG00000042606	SMARCAD1	100	85.297	ENSMODG00000019268	SMARCAD1	100	81.564	Monodelphis_domestica
ENSMFAG00000042606	SMARCAD1	95	93.743	MGP_CAROLIEiJ_G0028458	-	77	93.743	Mus_caroli
ENSMFAG00000042606	SMARCAD1	99	93.454	ENSMUSG00000029920	Smarcad1	100	92.405	Mus_musculus
ENSMFAG00000042606	SMARCAD1	99	93.792	MGP_PahariEiJ_G0022198	Smarcad1	100	92.697	Mus_pahari
ENSMFAG00000042606	SMARCAD1	100	93.363	MGP_SPRETEiJ_G0029462	Smarcad1	100	92.502	Mus_spretus
ENSMFAG00000042606	SMARCAD1	100	97.755	ENSMPUG00000002111	SMARCAD1	100	97.082	Mustela_putorius_furo
ENSMFAG00000042606	SMARCAD1	100	93.939	ENSMLUG00000000425	SMARCAD1	100	93.093	Myotis_lucifugus
ENSMFAG00000042606	SMARCAD1	99	95.805	ENSNGAG00000000810	Smarcad1	100	93.957	Nannospalax_galili
ENSMFAG00000042606	SMARCAD1	76	63.274	ENSNBRG00000012749	smarcad1a	85	61.367	Neolamprologus_brichardi
ENSMFAG00000042606	SMARCAD1	100	99.550	ENSNLEG00000014225	SMARCAD1	100	100.000	Nomascus_leucogenys
ENSMFAG00000042606	SMARCAD1	100	95.838	ENSODEG00000004334	SMARCAD1	100	94.461	Octodon_degus
ENSMFAG00000042606	SMARCAD1	73	66.049	ENSONIG00000015059	smarcad1a	100	52.124	Oreochromis_niloticus
ENSMFAG00000042606	SMARCAD1	92	84.662	ENSOANG00000013764	SMARCAD1	100	84.662	Ornithorhynchus_anatinus
ENSMFAG00000042606	SMARCAD1	100	97.188	ENSOCUG00000017283	SMARCAD1	100	96.979	Oryctolagus_cuniculus
ENSMFAG00000042606	SMARCAD1	91	65.060	ENSORLG00000004869	smarcad1a	89	61.326	Oryzias_latipes
ENSMFAG00000042606	SMARCAD1	91	65.060	ENSORLG00020020569	smarcad1a	89	61.134	Oryzias_latipes_hni
ENSMFAG00000042606	SMARCAD1	91	64.910	ENSORLG00015009045	smarcad1a	84	61.348	Oryzias_latipes_hsok
ENSMFAG00000042606	SMARCAD1	95	64.812	ENSOMEG00000023032	smarcad1a	86	60.905	Oryzias_melastigma
ENSMFAG00000042606	SMARCAD1	100	96.861	ENSOGAG00000011444	SMARCAD1	100	96.501	Otolemur_garnettii
ENSMFAG00000042606	SMARCAD1	100	96.887	ENSOARG00000017851	SMARCAD1	100	96.887	Ovis_aries
ENSMFAG00000042606	SMARCAD1	100	99.550	ENSPPAG00000035715	SMARCAD1	100	99.318	Pan_paniscus
ENSMFAG00000042606	SMARCAD1	100	97.753	ENSPPRG00000024756	SMARCAD1	100	98.993	Panthera_pardus
ENSMFAG00000042606	SMARCAD1	100	97.534	ENSPTIG00000017868	SMARCAD1	100	96.696	Panthera_tigris_altaica
ENSMFAG00000042606	SMARCAD1	100	99.550	ENSPTRG00000023126	SMARCAD1	100	100.000	Pan_troglodytes
ENSMFAG00000042606	SMARCAD1	100	98.445	ENSPANG00000019757	SMARCAD1	100	98.445	Papio_anubis
ENSMFAG00000042606	SMARCAD1	100	77.405	ENSPSIG00000010255	SMARCAD1	100	73.206	Pelodiscus_sinensis
ENSMFAG00000042606	SMARCAD1	72	64.386	ENSPMGG00000010735	smarcad1a	95	62.870	Periophthalmus_magnuspinnatus
ENSMFAG00000042606	SMARCAD1	100	81.890	ENSPEMG00000001854	Smarcad1	100	78.947	Peromyscus_maniculatus_bairdii
ENSMFAG00000042606	SMARCAD1	97	51.412	ENSPMAG00000003516	smarcad1a	99	47.193	Petromyzon_marinus
ENSMFAG00000042606	SMARCAD1	89	87.358	ENSPCIG00000008137	SMARCAD1	98	88.736	Phascolarctos_cinereus
ENSMFAG00000042606	SMARCAD1	91	66.615	ENSPFOG00000019116	smarcad1a	83	61.676	Poecilia_formosa
ENSMFAG00000042606	SMARCAD1	91	66.459	ENSPLAG00000000108	smarcad1a	83	61.538	Poecilia_latipinna
ENSMFAG00000042606	SMARCAD1	91	66.615	ENSPMEG00000009155	smarcad1a	83	61.676	Poecilia_mexicana
ENSMFAG00000042606	SMARCAD1	100	63.714	ENSPREG00000018185	smarcad1a	94	62.587	Poecilia_reticulata
ENSMFAG00000042606	SMARCAD1	100	98.765	ENSPPYG00000014935	SMARCAD1	100	98.444	Pongo_abelii
ENSMFAG00000042606	SMARCAD1	73	97.398	ENSPCOG00000020478	SMARCAD1	89	97.398	Propithecus_coquereli
ENSMFAG00000042606	SMARCAD1	100	95.628	ENSPVAG00000001760	SMARCAD1	100	95.141	Pteropus_vampyrus
ENSMFAG00000042606	SMARCAD1	77	62.154	ENSPNYG00000010087	smarcad1a	86	60.948	Pundamilia_nyererei
ENSMFAG00000042606	SMARCAD1	90	58.549	ENSPNAG00000010099	smarcad1b	84	59.623	Pygocentrus_nattereri
ENSMFAG00000042606	SMARCAD1	97	55.642	ENSPNAG00000001663	smarcad1a	100	50.046	Pygocentrus_nattereri
ENSMFAG00000042606	SMARCAD1	100	93.379	ENSRNOG00000006391	Smarcad1	100	93.379	Rattus_norvegicus
ENSMFAG00000042606	SMARCAD1	100	99.663	ENSRBIG00000041989	SMARCAD1	100	99.513	Rhinopithecus_bieti
ENSMFAG00000042606	SMARCAD1	100	99.663	ENSRROG00000035309	SMARCAD1	100	99.513	Rhinopithecus_roxellana
ENSMFAG00000042606	SMARCAD1	100	98.928	ENSSBOG00000032114	SMARCAD1	100	99.664	Saimiri_boliviensis_boliviensis
ENSMFAG00000042606	SMARCAD1	100	85.955	ENSSHAG00000001279	SMARCAD1	100	82.432	Sarcophilus_harrisii
ENSMFAG00000042606	SMARCAD1	97	55.641	ENSSFOG00015016814	smarcad1b	100	50.231	Scleropages_formosus
ENSMFAG00000042606	SMARCAD1	86	57.513	ENSSFOG00015020909	smarcad1a	100	57.642	Scleropages_formosus
ENSMFAG00000042606	SMARCAD1	97	64.470	ENSSMAG00000001326	smarcad1a	97	62.517	Scophthalmus_maximus
ENSMFAG00000042606	SMARCAD1	78	63.558	ENSSDUG00000022338	smarcad1a	84	62.325	Seriola_dumerili
ENSMFAG00000042606	SMARCAD1	96	63.128	ENSSLDG00000024986	smarcad1a	97	61.496	Seriola_lalandi_dorsalis
ENSMFAG00000042606	SMARCAD1	67	84.590	ENSSPUG00000004633	SMARCAD1	100	84.590	Sphenodon_punctatus
ENSMFAG00000042606	SMARCAD1	100	63.506	ENSSPAG00000001970	smarcad1a	96	62.430	Stegastes_partitus
ENSMFAG00000042606	SMARCAD1	100	96.693	ENSSSCG00000009193	SMARCAD1	100	97.860	Sus_scrofa
ENSMFAG00000042606	SMARCAD1	88	77.806	ENSTGUG00000003127	SMARCAD1	100	78.061	Taeniopygia_guttata
ENSMFAG00000042606	SMARCAD1	99	56.551	ENSTNIG00000017585	smarcad1a	99	56.872	Tetraodon_nigroviridis
ENSMFAG00000042606	SMARCAD1	91	97.817	ENSTBEG00000002789	SMARCAD1	91	97.817	Tupaia_belangeri
ENSMFAG00000042606	SMARCAD1	100	97.194	ENSTTRG00000000226	SMARCAD1	100	95.730	Tursiops_truncatus
ENSMFAG00000042606	SMARCAD1	100	97.980	ENSUAMG00000022262	SMARCAD1	100	97.179	Ursus_americanus
ENSMFAG00000042606	SMARCAD1	100	97.978	ENSUMAG00000004549	SMARCAD1	100	97.274	Ursus_maritimus
ENSMFAG00000042606	SMARCAD1	99	97.404	ENSVVUG00000007271	SMARCAD1	100	97.384	Vulpes_vulpes
ENSMFAG00000042606	SMARCAD1	97	65.870	ENSXETG00000019214	smarcad1	100	65.757	Xenopus_tropicalis
ENSMFAG00000042606	SMARCAD1	89	57.107	ENSXCOG00000005232	smarcad1a	94	54.152	Xiphophorus_couchianus
ENSMFAG00000042606	SMARCAD1	91	66.303	ENSXMAG00000015350	smarcad1a	82	61.073	Xiphophorus_maculatus