EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000043865 (Gene tree)
Gene ID: 102116951
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 131720 bases
Position: chr9:12354763-12486482
Accession: 102116951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000024703	Upf2	PF04050.14	8.8e-33	1	1
ENSMFAP00000024711	Upf2	PF04050.14	1.3e-32	1	1
ENSMFAP00000024703	MIF4G	PF02854.19	1.7e-80	1	3
ENSMFAP00000024703	MIF4G	PF02854.19	1.7e-80	2	3
ENSMFAP00000024703	MIF4G	PF02854.19	1.7e-80	3	3
ENSMFAP00000024711	MIF4G	PF02854.19	2.6e-78	1	3
ENSMFAP00000024711	MIF4G	PF02854.19	2.6e-78	2	3
ENSMFAP00000024711	MIF4G	PF02854.19	2.6e-78	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000032853	UPF2-202	3768	-	ENSMFAP00000024711	1255 (aa)	-	A0A2K5VIY6
ENSMFAT00000032845	UPF2-201	5398	XM_005564620	ENSMFAP00000024703	1272 (aa)	XP_005564677	A0A2K5VJ20

Gene Model

Click here to download ENSMFAG00000043865's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03013	RNA transport	KEGG
mcf03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000043865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000043865	UPF2	100	99.528	ENSG00000151461	UPF2	100	99.528	Homo_sapiens
ENSMFAG00000043865	UPF2	99	78.482	ENSAPOG00000015837	UPF2	100	78.326	Acanthochromis_polyacanthus
ENSMFAG00000043865	UPF2	100	97.799	ENSAMEG00000004586	UPF2	100	97.799	Ailuropoda_melanoleuca
ENSMFAG00000043865	UPF2	99	82.592	ENSACIG00000018078	UPF2	100	82.514	Amphilophus_citrinellus
ENSMFAG00000043865	UPF2	100	82.619	ENSAOCG00000016766	UPF2	100	82.697	Amphiprion_ocellaris
ENSMFAG00000043865	UPF2	100	82.697	ENSAPEG00000019084	UPF2	100	82.775	Amphiprion_percula
ENSMFAG00000043865	UPF2	100	82.517	ENSATEG00000021677	UPF2	99	82.724	Anabas_testudineus
ENSMFAG00000043865	UPF2	100	86.714	ENSAPLG00000010287	UPF2	100	86.242	Anas_platyrhynchos
ENSMFAG00000043865	UPF2	100	91.981	ENSACAG00000009259	UPF2	100	91.981	Anolis_carolinensis
ENSMFAG00000043865	UPF2	99	88.679	ENSANAG00000028451	UPF2	99	87.343	Aotus_nancymaae
ENSMFAG00000043865	UPF2	100	81.060	ENSACLG00000012696	UPF2	100	82.775	Astatotilapia_calliptera
ENSMFAG00000043865	UPF2	99	82.486	ENSAMXG00000013700	UPF2	99	82.877	Astyanax_mexicanus
ENSMFAG00000043865	UPF2	100	97.720	ENSBTAG00000000288	UPF2	100	97.720	Bos_taurus
ENSMFAG00000043865	UPF2	100	99.214	ENSCJAG00000020685	UPF2	100	99.214	Callithrix_jacchus
ENSMFAG00000043865	UPF2	100	97.799	ENSCAFG00000004839	UPF2	100	97.799	Canis_familiaris
ENSMFAG00000043865	UPF2	100	96.574	ENSCAFG00020005882	UPF2	100	96.574	Canis_lupus_dingo
ENSMFAG00000043865	UPF2	100	97.799	ENSCHIG00000020359	UPF2	100	97.799	Capra_hircus
ENSMFAG00000043865	UPF2	100	98.035	ENSTSYG00000000935	UPF2	100	98.035	Carlito_syrichta
ENSMFAG00000043865	UPF2	91	87.360	ENSCAPG00000016658	UPF2	100	86.367	Cavia_aperea
ENSMFAG00000043865	UPF2	99	94.136	ENSCPOG00000008809	UPF2	99	94.929	Cavia_porcellus
ENSMFAG00000043865	UPF2	100	93.632	ENSCCAG00000035991	UPF2	100	93.632	Cebus_capucinus
ENSMFAG00000043865	UPF2	100	99.921	ENSCATG00000032679	UPF2	100	99.921	Cercocebus_atys
ENSMFAG00000043865	UPF2	100	97.248	ENSCLAG00000011434	UPF2	100	97.248	Chinchilla_lanigera
ENSMFAG00000043865	UPF2	100	99.843	ENSCSAG00000013372	UPF2	100	99.843	Chlorocebus_sabaeus
ENSMFAG00000043865	UPF2	87	99.554	ENSCHOG00000000422	UPF2	89	99.554	Choloepus_hoffmanni
ENSMFAG00000043865	UPF2	99	92.677	ENSCPBG00000027823	UPF2	100	92.520	Chrysemys_picta_bellii
ENSMFAG00000043865	UPF2	79	48.963	ENSCSAVG00000007772	-	79	50.446	Ciona_savignyi
ENSMFAG00000043865	UPF2	100	94.774	ENSCANG00000040396	UPF2	100	94.774	Colobus_angolensis_palliatus
ENSMFAG00000043865	UPF2	100	97.484	ENSCGRG00001019347	Upf2	100	97.484	Cricetulus_griseus_chok1gshd
ENSMFAG00000043865	UPF2	100	97.484	ENSCGRG00000017993	Upf2	100	97.484	Cricetulus_griseus_crigri
ENSMFAG00000043865	UPF2	91	80.723	ENSCSEG00000003520	UPF2	99	77.891	Cynoglossus_semilaevis
ENSMFAG00000043865	UPF2	99	82.182	ENSCVAG00000006167	UPF2	100	81.947	Cyprinodon_variegatus
ENSMFAG00000043865	UPF2	100	97.799	ENSDNOG00000018160	UPF2	100	97.799	Dasypus_novemcinctus
ENSMFAG00000043865	UPF2	100	97.091	ENSDORG00000002478	Upf2	100	97.091	Dipodomys_ordii
ENSMFAG00000043865	UPF2	89	36.439	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSMFAG00000043865	UPF2	72	100.000	ENSETEG00000011583	-	72	100.000	Echinops_telfairi
ENSMFAG00000043865	UPF2	66	72.483	ENSEBUG00000012448	-	88	72.483	Eptatretus_burgeri
ENSMFAG00000043865	UPF2	100	97.799	ENSEASG00005019274	UPF2	100	99.383	Equus_asinus_asinus
ENSMFAG00000043865	UPF2	100	97.877	ENSECAG00000017022	UPF2	100	97.877	Equus_caballus
ENSMFAG00000043865	UPF2	82	95.208	ENSEEUG00000007819	UPF2	82	95.208	Erinaceus_europaeus
ENSMFAG00000043865	UPF2	99	81.499	ENSELUG00000012014	UPF2	100	81.832	Esox_lucius
ENSMFAG00000043865	UPF2	100	99.448	ENSFCAG00000005785	UPF2	100	97.642	Felis_catus
ENSMFAG00000043865	UPF2	100	91.352	ENSFALG00000001889	UPF2	98	93.160	Ficedula_albicollis
ENSMFAG00000043865	UPF2	100	97.091	ENSFDAG00000014348	UPF2	100	97.091	Fukomys_damarensis
ENSMFAG00000043865	UPF2	99	82.418	ENSFHEG00000009826	UPF2	100	82.311	Fundulus_heteroclitus
ENSMFAG00000043865	UPF2	91	83.938	ENSGMOG00000005557	UPF2	100	80.187	Gadus_morhua
ENSMFAG00000043865	UPF2	100	93.480	ENSGALG00000033772	UPF2	100	93.480	Gallus_gallus
ENSMFAG00000043865	UPF2	92	84.655	ENSGAFG00000020867	UPF2	100	81.606	Gambusia_affinis
ENSMFAG00000043865	UPF2	90	84.383	ENSGACG00000001080	UPF2	100	82.201	Gasterosteus_aculeatus
ENSMFAG00000043865	UPF2	100	92.846	ENSGAGG00000002700	UPF2	100	92.846	Gopherus_agassizii
ENSMFAG00000043865	UPF2	100	99.607	ENSGGOG00000001479	UPF2	100	99.607	Gorilla_gorilla
ENSMFAG00000043865	UPF2	100	80.904	ENSHBUG00000004249	UPF2	100	82.748	Haplochromis_burtoni
ENSMFAG00000043865	UPF2	99	85.838	ENSHGLG00000003822	-	99	84.972	Heterocephalus_glaber_female
ENSMFAG00000043865	UPF2	100	97.170	ENSHGLG00000015176	-	100	97.170	Heterocephalus_glaber_female
ENSMFAG00000043865	UPF2	99	92.992	ENSHGLG00100010036	UPF2	100	90.676	Heterocephalus_glaber_male
ENSMFAG00000043865	UPF2	100	80.590	ENSHCOG00000004025	UPF2	99	80.590	Hippocampus_comes
ENSMFAG00000043865	UPF2	100	81.528	ENSIPUG00000015524	UPF2	100	81.825	Ictalurus_punctatus
ENSMFAG00000043865	UPF2	100	97.563	ENSSTOG00000013075	UPF2	100	97.563	Ictidomys_tridecemlineatus
ENSMFAG00000043865	UPF2	100	96.384	ENSJJAG00000004913	Upf2	100	96.384	Jaculus_jaculus
ENSMFAG00000043865	UPF2	99	82.081	ENSKMAG00000001071	UPF2	100	82.353	Kryptolebias_marmoratus
ENSMFAG00000043865	UPF2	80	82.237	ENSLBEG00000000728	-	93	82.336	Labrus_bergylta
ENSMFAG00000043865	UPF2	100	82.764	ENSLBEG00000016394	-	99	82.815	Labrus_bergylta
ENSMFAG00000043865	UPF2	99	77.561	ENSLACG00000015945	UPF2	100	79.248	Latimeria_chalumnae
ENSMFAG00000043865	UPF2	99	84.646	ENSLOCG00000015698	UPF2	100	85.984	Lepisosteus_oculatus
ENSMFAG00000043865	UPF2	100	100.000	ENSMMUG00000008241	UPF2	100	100.000	Macaca_mulatta
ENSMFAG00000043865	UPF2	81	99.707	ENSMNEG00000008062	UPF2	100	99.707	Macaca_nemestrina
ENSMFAG00000043865	UPF2	100	97.940	ENSMLEG00000036120	UPF2	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000043865	UPF2	100	82.284	ENSMAMG00000018276	UPF2	100	82.412	Mastacembelus_armatus
ENSMFAG00000043865	UPF2	100	81.060	ENSMZEG00005021595	UPF2	100	82.775	Maylandia_zebra
ENSMFAG00000043865	UPF2	99	92.846	ENSMGAG00000004573	UPF2	99	92.846	Meleagris_gallopavo
ENSMFAG00000043865	UPF2	100	95.126	ENSMAUG00000016512	Upf2	100	95.126	Mesocricetus_auratus
ENSMFAG00000043865	UPF2	100	93.068	ENSMICG00000001716	UPF2	100	94.016	Microcebus_murinus
ENSMFAG00000043865	UPF2	100	96.855	ENSMOCG00000008263	Upf2	100	96.855	Microtus_ochrogaster
ENSMFAG00000043865	UPF2	99	80.016	ENSMMOG00000006528	UPF2	100	80.282	Mola_mola
ENSMFAG00000043865	UPF2	100	95.519	ENSMODG00000016794	UPF2	100	95.519	Monodelphis_domestica
ENSMFAG00000043865	UPF2	99	82.188	ENSMALG00000002663	UPF2	100	82.160	Monopterus_albus
ENSMFAG00000043865	UPF2	100	97.091	MGP_CAROLIEiJ_G0023157	Upf2	100	98.476	Mus_caroli
ENSMFAG00000043865	UPF2	100	97.091	ENSMUSG00000043241	Upf2	100	97.091	Mus_musculus
ENSMFAG00000043865	UPF2	100	96.698	MGP_PahariEiJ_G0019217	Upf2	100	97.524	Mus_pahari
ENSMFAG00000043865	UPF2	100	97.327	MGP_SPRETEiJ_G0024075	Upf2	100	97.905	Mus_spretus
ENSMFAG00000043865	UPF2	100	97.799	ENSMPUG00000001064	UPF2	100	97.799	Mustela_putorius_furo
ENSMFAG00000043865	UPF2	99	97.096	ENSMLUG00000000228	UPF2	100	97.096	Myotis_lucifugus
ENSMFAG00000043865	UPF2	100	81.060	ENSNBRG00000013629	UPF2	100	82.775	Neolamprologus_brichardi
ENSMFAG00000043865	UPF2	100	99.528	ENSNLEG00000012058	UPF2	100	99.528	Nomascus_leucogenys
ENSMFAG00000043865	UPF2	61	97.927	ENSMEUG00000002180	-	60	97.927	Notamacropus_eugenii
ENSMFAG00000043865	UPF2	76	100.000	ENSOPRG00000006801	-	78	100.000	Ochotona_princeps
ENSMFAG00000043865	UPF2	100	96.698	ENSODEG00000001290	UPF2	100	96.698	Octodon_degus
ENSMFAG00000043865	UPF2	100	81.138	ENSONIG00000017991	UPF2	100	82.853	Oreochromis_niloticus
ENSMFAG00000043865	UPF2	99	97.103	ENSOCUG00000006230	UPF2	100	97.103	Oryctolagus_cuniculus
ENSMFAG00000043865	UPF2	100	81.260	ENSORLG00000017189	UPF2	100	81.995	Oryzias_latipes
ENSMFAG00000043865	UPF2	100	81.260	ENSORLG00020005969	UPF2	100	81.995	Oryzias_latipes_hni
ENSMFAG00000043865	UPF2	100	81.260	ENSORLG00015005713	UPF2	100	81.995	Oryzias_latipes_hsok
ENSMFAG00000043865	UPF2	99	77.708	ENSOMEG00000023420	UPF2	98	79.062	Oryzias_melastigma
ENSMFAG00000043865	UPF2	100	98.506	ENSOGAG00000005796	UPF2	100	98.506	Otolemur_garnettii
ENSMFAG00000043865	UPF2	100	97.645	ENSOARG00000014587	UPF2	100	97.645	Ovis_aries
ENSMFAG00000043865	UPF2	100	96.910	ENSPPAG00000037953	UPF2	100	96.910	Pan_paniscus
ENSMFAG00000043865	UPF2	100	97.642	ENSPPRG00000000690	UPF2	100	97.642	Panthera_pardus
ENSMFAG00000043865	UPF2	100	97.642	ENSPTIG00000008867	UPF2	100	97.642	Panthera_tigris_altaica
ENSMFAG00000043865	UPF2	100	99.607	ENSPTRG00000002291	UPF2	100	99.607	Pan_troglodytes
ENSMFAG00000043865	UPF2	100	99.843	ENSPANG00000023399	UPF2	100	99.843	Papio_anubis
ENSMFAG00000043865	UPF2	100	80.811	ENSPKIG00000025502	UPF2	100	82.073	Paramormyrops_kingsleyae
ENSMFAG00000043865	UPF2	59	91.379	ENSPSIG00000015158	UPF2	95	91.379	Pelodiscus_sinensis
ENSMFAG00000043865	UPF2	99	79.749	ENSPMGG00000005259	UPF2	100	80.534	Periophthalmus_magnuspinnatus
ENSMFAG00000043865	UPF2	93	93.895	ENSPEMG00000015731	Upf2	99	93.895	Peromyscus_maniculatus_bairdii
ENSMFAG00000043865	UPF2	100	93.160	ENSPCIG00000006656	UPF2	100	95.204	Phascolarctos_cinereus
ENSMFAG00000043865	UPF2	100	79.891	ENSPFOG00000017118	UPF2	100	81.917	Poecilia_formosa
ENSMFAG00000043865	UPF2	100	79.891	ENSPLAG00000005094	UPF2	100	81.917	Poecilia_latipinna
ENSMFAG00000043865	UPF2	100	79.891	ENSPMEG00000017009	UPF2	100	81.917	Poecilia_mexicana
ENSMFAG00000043865	UPF2	99	79.656	ENSPREG00000021880	UPF2	100	82.081	Poecilia_reticulata
ENSMFAG00000043865	UPF2	66	99.880	ENSPPYG00000002089	-	100	99.880	Pongo_abelii
ENSMFAG00000043865	UPF2	100	83.412	ENSPCAG00000000684	UPF2	100	83.412	Procavia_capensis
ENSMFAG00000043865	UPF2	100	96.096	ENSPCOG00000021656	UPF2	100	96.096	Propithecus_coquereli
ENSMFAG00000043865	UPF2	100	90.102	ENSPVAG00000017286	UPF2	100	90.102	Pteropus_vampyrus
ENSMFAG00000043865	UPF2	99	78.610	ENSPNYG00000017096	UPF2	100	80.328	Pundamilia_nyererei
ENSMFAG00000043865	UPF2	100	82.697	ENSPNAG00000009357	UPF2	100	83.164	Pygocentrus_nattereri
ENSMFAG00000043865	UPF2	99	90.745	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSMFAG00000043865	UPF2	99	98.740	ENSRBIG00000037780	UPF2	100	98.740	Rhinopithecus_bieti
ENSMFAG00000043865	UPF2	100	99.764	ENSRROG00000043547	UPF2	100	99.764	Rhinopithecus_roxellana
ENSMFAG00000043865	UPF2	100	98.899	ENSSBOG00000020012	UPF2	100	98.899	Saimiri_boliviensis_boliviensis
ENSMFAG00000043865	UPF2	100	81.698	ENSSFOG00015023788	upf2	100	82.788	Scleropages_formosus
ENSMFAG00000043865	UPF2	90	83.001	ENSSMAG00000007637	UPF2	100	80.155	Scophthalmus_maximus
ENSMFAG00000043865	UPF2	100	82.307	ENSSDUG00000017244	UPF2	99	82.775	Seriola_dumerili
ENSMFAG00000043865	UPF2	99	80.595	ENSSLDG00000016866	UPF2	100	81.142	Seriola_lalandi_dorsalis
ENSMFAG00000043865	UPF2	100	95.440	ENSSARG00000008615	UPF2	100	95.440	Sorex_araneus
ENSMFAG00000043865	UPF2	99	90.008	ENSSPUG00000014544	UPF2	99	90.008	Sphenodon_punctatus
ENSMFAG00000043865	UPF2	68	99.079	ENSSSCG00000011117	-	100	99.079	Sus_scrofa
ENSMFAG00000043865	UPF2	99	91.332	ENSTGUG00000002163	-	100	93.144	Taeniopygia_guttata
ENSMFAG00000043865	UPF2	100	81.790	ENSTRUG00000007519	UPF2	99	82.151	Takifugu_rubripes
ENSMFAG00000043865	UPF2	100	80.031	ENSTNIG00000004453	UPF2	100	79.922	Tetraodon_nigroviridis
ENSMFAG00000043865	UPF2	93	90.440	ENSTBEG00000012679	UPF2	93	90.778	Tupaia_belangeri
ENSMFAG00000043865	UPF2	100	97.720	ENSTTRG00000016388	UPF2	100	97.720	Tursiops_truncatus
ENSMFAG00000043865	UPF2	94	100.000	ENSUAMG00000023560	UPF2	100	100.000	Ursus_americanus
ENSMFAG00000043865	UPF2	100	98.035	ENSUMAG00000012953	UPF2	95	98.035	Ursus_maritimus
ENSMFAG00000043865	UPF2	86	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMFAG00000043865	UPF2	100	97.720	ENSVVUG00000006166	UPF2	100	97.720	Vulpes_vulpes
ENSMFAG00000043865	UPF2	100	83.683	ENSXETG00000033103	UPF2	99	82.115	Xenopus_tropicalis
ENSMFAG00000043865	UPF2	92	84.458	ENSXCOG00000011604	UPF2	100	81.577	Xiphophorus_couchianus
ENSMFAG00000043865	UPF2	92	84.740	ENSXMAG00000017209	UPF2	100	81.606	Xiphophorus_maculatus