EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000043943 (Gene tree)
Gene ID: 102145119
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 95375 bases
Position: chr16:75382238-75477612
Accession: 102145119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000024828	Ago_hook	PF10427.9	5.4e-22	1	1
ENSMFAP00000024809	Ago_hook	PF10427.9	2.5e-21	1	1
ENSMFAP00000024814	Ago_hook	PF10427.9	3.6e-21	1	1
ENSMFAP00000024814	RRM_1	PF00076.22	0.00035	1	1
ENSMFAP00000024809	RRM_1	PF00076.22	0.00036	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000032972	TNRC6C-203	5760	XM_005585103	ENSMFAP00000024828	1919 (aa)	XP_005585160	A0A2K5VJ97
ENSMFAT00000032953	TNRC6C-201	10171	-	ENSMFAP00000024809	1725 (aa)	-	G7PSX1
ENSMFAT00000032958	TNRC6C-202	10063	XM_005585108	ENSMFAP00000024814	1689 (aa)	XP_005585165	A0A2K5VJ17

Gene Model

Click here to download ENSMFAG00000043943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000043943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000043943	TNRC6C	98	43.631	ENSMFAG00000003824	TNRC6A	99	42.269
ENSMFAG00000043943	TNRC6C	99	36.740	ENSMFAG00000003862	TNRC6B	90	50.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000043943	TNRC6C	100	99.073	ENSG00000078687	TNRC6C	100	99.073	Homo_sapiens
ENSMFAG00000043943	TNRC6C	80	54.617	ENSAPOG00000019749	tnrc6c1	98	49.157	Acanthochromis_polyacanthus
ENSMFAG00000043943	TNRC6C	100	89.724	ENSAMEG00000013756	TNRC6C	99	89.174	Ailuropoda_melanoleuca
ENSMFAG00000043943	TNRC6C	94	50.359	ENSACIG00000008075	tnrc6c1	98	54.440	Amphilophus_citrinellus
ENSMFAG00000043943	TNRC6C	77	68.960	ENSAOCG00000023968	tnrc6c1	99	49.104	Amphiprion_ocellaris
ENSMFAG00000043943	TNRC6C	80	54.334	ENSAPEG00000009020	tnrc6c1	99	49.002	Amphiprion_percula
ENSMFAG00000043943	TNRC6C	100	87.049	ENSAPLG00000005456	TNRC6C	100	86.474	Anas_platyrhynchos
ENSMFAG00000043943	TNRC6C	100	87.731	ENSACAG00000016198	TNRC6C	98	86.823	Anolis_carolinensis
ENSMFAG00000043943	TNRC6C	100	98.165	ENSANAG00000021554	TNRC6C	100	98.165	Aotus_nancymaae
ENSMFAG00000043943	TNRC6C	100	49.390	ENSACLG00000000424	tnrc6c1	99	48.660	Astatotilapia_calliptera
ENSMFAG00000043943	TNRC6C	97	90.961	ENSBTAG00000018658	TNRC6C	100	88.246	Bos_taurus
ENSMFAG00000043943	TNRC6C	100	98.105	ENSCJAG00000019431	TNRC6C	100	98.105	Callithrix_jacchus
ENSMFAG00000043943	TNRC6C	100	91.546	ENSCAFG00000005224	TNRC6C	99	90.980	Canis_familiaris
ENSMFAG00000043943	TNRC6C	100	91.182	ENSCAFG00020006661	TNRC6C	100	90.479	Canis_lupus_dingo
ENSMFAG00000043943	TNRC6C	100	87.633	ENSCHIG00000026004	TNRC6C	100	86.176	Capra_hircus
ENSMFAG00000043943	TNRC6C	100	96.058	ENSTSYG00000005403	TNRC6C	100	96.058	Carlito_syrichta
ENSMFAG00000043943	TNRC6C	100	84.882	ENSCAPG00000007307	TNRC6C	99	83.971	Cavia_aperea
ENSMFAG00000043943	TNRC6C	100	90.231	ENSCPOG00000000467	TNRC6C	100	88.278	Cavia_porcellus
ENSMFAG00000043943	TNRC6C	100	98.377	ENSCCAG00000030524	TNRC6C	100	98.377	Cebus_capucinus
ENSMFAG00000043943	TNRC6C	100	99.884	ENSCATG00000033135	TNRC6C	100	99.884	Cercocebus_atys
ENSMFAG00000043943	TNRC6C	100	93.250	ENSCLAG00000011139	TNRC6C	99	90.449	Chinchilla_lanigera
ENSMFAG00000043943	TNRC6C	100	99.826	ENSCSAG00000005167	TNRC6C	99	99.322	Chlorocebus_sabaeus
ENSMFAG00000043943	TNRC6C	75	92.051	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSMFAG00000043943	TNRC6C	100	88.069	ENSCPBG00000027960	TNRC6C	100	88.069	Chrysemys_picta_bellii
ENSMFAG00000043943	TNRC6C	100	99.130	ENSCANG00000041771	TNRC6C	100	99.130	Colobus_angolensis_palliatus
ENSMFAG00000043943	TNRC6C	100	89.864	ENSCGRG00001022686	Tnrc6c	100	88.686	Cricetulus_griseus_chok1gshd
ENSMFAG00000043943	TNRC6C	100	90.290	ENSCGRG00000018041	Tnrc6c	100	88.686	Cricetulus_griseus_crigri
ENSMFAG00000043943	TNRC6C	80	53.408	ENSCSEG00000012744	tnrc6c1	98	45.914	Cynoglossus_semilaevis
ENSMFAG00000043943	TNRC6C	100	54.252	ENSDARG00000076847	tnrc6c1	99	54.313	Danio_rerio
ENSMFAG00000043943	TNRC6C	100	91.209	ENSDNOG00000003247	TNRC6C	99	88.958	Dasypus_novemcinctus
ENSMFAG00000043943	TNRC6C	100	86.051	ENSDORG00000004558	Tnrc6c	100	85.933	Dipodomys_ordii
ENSMFAG00000043943	TNRC6C	90	83.043	ENSETEG00000005527	TNRC6C	86	83.627	Echinops_telfairi
ENSMFAG00000043943	TNRC6C	100	91.183	ENSEASG00005004799	TNRC6C	100	91.243	Equus_asinus_asinus
ENSMFAG00000043943	TNRC6C	100	91.309	ENSECAG00000012486	TNRC6C	99	90.553	Equus_caballus
ENSMFAG00000043943	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.217	Erinaceus_europaeus
ENSMFAG00000043943	TNRC6C	100	89.250	ENSFCAG00000028358	TNRC6C	100	89.191	Felis_catus
ENSMFAG00000043943	TNRC6C	100	87.067	ENSFALG00000000848	TNRC6C	100	86.387	Ficedula_albicollis
ENSMFAG00000043943	TNRC6C	100	91.356	ENSFDAG00000010368	TNRC6C	100	89.680	Fukomys_damarensis
ENSMFAG00000043943	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	45.943	Fundulus_heteroclitus
ENSMFAG00000043943	TNRC6C	100	88.992	ENSGALG00000001725	TNRC6C	100	88.521	Gallus_gallus
ENSMFAG00000043943	TNRC6C	100	48.868	ENSGAFG00000019019	tnrc6c1	100	49.172	Gambusia_affinis
ENSMFAG00000043943	TNRC6C	93	52.632	ENSGACG00000012320	tnrc6c1	97	47.966	Gasterosteus_aculeatus
ENSMFAG00000043943	TNRC6C	100	87.688	ENSGAGG00000022043	TNRC6C	99	87.486	Gopherus_agassizii
ENSMFAG00000043943	TNRC6C	100	98.320	ENSGGOG00000011304	TNRC6C	100	98.320	Gorilla_gorilla
ENSMFAG00000043943	TNRC6C	100	49.525	ENSHBUG00000010846	tnrc6c1	99	48.784	Haplochromis_burtoni
ENSMFAG00000043943	TNRC6C	100	92.718	ENSHGLG00000004809	TNRC6C	99	89.828	Heterocephalus_glaber_female
ENSMFAG00000043943	TNRC6C	100	91.691	ENSHGLG00100012597	TNRC6C	99	89.984	Heterocephalus_glaber_male
ENSMFAG00000043943	TNRC6C	99	51.068	ENSIPUG00000000818	tnrc6c1	98	51.605	Ictalurus_punctatus
ENSMFAG00000043943	TNRC6C	100	91.248	ENSSTOG00000009101	TNRC6C	100	88.908	Ictidomys_tridecemlineatus
ENSMFAG00000043943	TNRC6C	100	88.922	ENSJJAG00000017055	Tnrc6c	99	87.018	Jaculus_jaculus
ENSMFAG00000043943	TNRC6C	98	48.854	ENSKMAG00000021023	tnrc6c1	100	50.690	Kryptolebias_marmoratus
ENSMFAG00000043943	TNRC6C	100	75.601	ENSLACG00000015283	TNRC6C	100	74.138	Latimeria_chalumnae
ENSMFAG00000043943	TNRC6C	99	56.641	ENSLOCG00000013377	tnrc6c1	99	55.518	Lepisosteus_oculatus
ENSMFAG00000043943	TNRC6C	100	90.807	ENSLAFG00000011122	TNRC6C	99	88.935	Loxodonta_africana
ENSMFAG00000043943	TNRC6C	100	100.000	ENSMMUG00000011924	TNRC6C	100	100.000	Macaca_mulatta
ENSMFAG00000043943	TNRC6C	100	99.948	ENSMNEG00000030405	TNRC6C	100	99.948	Macaca_nemestrina
ENSMFAG00000043943	TNRC6C	100	99.948	ENSMLEG00000033436	TNRC6C	100	99.948	Mandrillus_leucophaeus
ENSMFAG00000043943	TNRC6C	94	55.108	ENSMAMG00000023613	tnrc6c1	100	51.314	Mastacembelus_armatus
ENSMFAG00000043943	TNRC6C	100	49.390	ENSMZEG00005010920	tnrc6c1	99	48.660	Maylandia_zebra
ENSMFAG00000043943	TNRC6C	100	80.183	ENSMGAG00000003906	TNRC6C	100	80.662	Meleagris_gallopavo
ENSMFAG00000043943	TNRC6C	100	89.629	ENSMAUG00000021618	Tnrc6c	100	89.570	Mesocricetus_auratus
ENSMFAG00000043943	TNRC6C	100	94.435	ENSMICG00000003952	TNRC6C	100	94.319	Microcebus_murinus
ENSMFAG00000043943	TNRC6C	100	91.829	ENSMOCG00000015879	Tnrc6c	100	89.344	Microtus_ochrogaster
ENSMFAG00000043943	TNRC6C	79	55.899	ENSMMOG00000005203	tnrc6c1	100	50.480	Mola_mola
ENSMFAG00000043943	TNRC6C	100	87.176	ENSMODG00000001785	TNRC6C	99	85.149	Monodelphis_domestica
ENSMFAG00000043943	TNRC6C	100	91.297	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.839	Mus_caroli
ENSMFAG00000043943	TNRC6C	100	91.060	ENSMUSG00000025571	Tnrc6c	100	88.615	Mus_musculus
ENSMFAG00000043943	TNRC6C	100	91.001	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.559	Mus_pahari
ENSMFAG00000043943	TNRC6C	100	91.119	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.671	Mus_spretus
ENSMFAG00000043943	TNRC6C	100	88.998	ENSMPUG00000013348	TNRC6C	97	88.530	Mustela_putorius_furo
ENSMFAG00000043943	TNRC6C	100	82.377	ENSMLUG00000014431	TNRC6C	97	81.959	Myotis_lucifugus
ENSMFAG00000043943	TNRC6C	100	90.748	ENSNGAG00000012203	Tnrc6c	99	89.092	Nannospalax_galili
ENSMFAG00000043943	TNRC6C	100	50.028	ENSNBRG00000005344	tnrc6c1	99	49.232	Neolamprologus_brichardi
ENSMFAG00000043943	TNRC6C	100	95.845	ENSNLEG00000000047	TNRC6C	99	96.445	Nomascus_leucogenys
ENSMFAG00000043943	TNRC6C	97	81.879	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSMFAG00000043943	TNRC6C	100	92.007	ENSODEG00000012499	TNRC6C	100	92.185	Octodon_degus
ENSMFAG00000043943	TNRC6C	94	51.399	ENSONIG00000002210	tnrc6c1	96	52.326	Oreochromis_niloticus
ENSMFAG00000043943	TNRC6C	99	63.546	ENSOANG00000009758	-	100	61.154	Ornithorhynchus_anatinus
ENSMFAG00000043943	TNRC6C	81	88.421	ENSOCUG00000006122	TNRC6C	83	81.135	Oryctolagus_cuniculus
ENSMFAG00000043943	TNRC6C	91	50.306	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSMFAG00000043943	TNRC6C	92	50.180	ENSORLG00020016510	tnrc6c1	100	49.335	Oryzias_latipes_hni
ENSMFAG00000043943	TNRC6C	72	45.305	ENSORLG00015000171	tnrc6c1	98	44.921	Oryzias_latipes_hsok
ENSMFAG00000043943	TNRC6C	92	51.050	ENSOMEG00000000357	tnrc6c1	99	48.173	Oryzias_melastigma
ENSMFAG00000043943	TNRC6C	100	93.159	ENSOGAG00000007197	TNRC6C	100	93.159	Otolemur_garnettii
ENSMFAG00000043943	TNRC6C	96	84.867	ENSOARG00000006041	TNRC6C	97	84.964	Ovis_aries
ENSMFAG00000043943	TNRC6C	100	99.014	ENSPPAG00000027160	TNRC6C	100	99.014	Pan_paniscus
ENSMFAG00000043943	TNRC6C	100	89.250	ENSPPRG00000018881	TNRC6C	100	89.191	Panthera_pardus
ENSMFAG00000043943	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	81	96.429	Panthera_tigris_altaica
ENSMFAG00000043943	TNRC6C	100	99.014	ENSPTRG00000009699	TNRC6C	100	99.014	Pan_troglodytes
ENSMFAG00000043943	TNRC6C	100	99.948	ENSPANG00000019994	TNRC6C	100	99.948	Papio_anubis
ENSMFAG00000043943	TNRC6C	96	52.779	ENSPKIG00000005428	tnrc6c1	100	51.688	Paramormyrops_kingsleyae
ENSMFAG00000043943	TNRC6C	100	86.458	ENSPSIG00000018069	TNRC6C	100	84.060	Pelodiscus_sinensis
ENSMFAG00000043943	TNRC6C	79	54.194	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSMFAG00000043943	TNRC6C	100	90.925	ENSPEMG00000009785	Tnrc6c	100	88.509	Peromyscus_maniculatus_bairdii
ENSMFAG00000043943	TNRC6C	58	86.154	ENSPCIG00000017421	-	99	86.008	Phascolarctos_cinereus
ENSMFAG00000043943	TNRC6C	100	48.681	ENSPFOG00000012560	tnrc6c1	97	57.427	Poecilia_formosa
ENSMFAG00000043943	TNRC6C	100	50.000	ENSPLAG00000021055	tnrc6c1	100	49.916	Poecilia_latipinna
ENSMFAG00000043943	TNRC6C	100	99.304	ENSPPYG00000008679	TNRC6C	97	98.747	Pongo_abelii
ENSMFAG00000043943	TNRC6C	93	92.654	ENSPCAG00000012510	TNRC6C	91	92.654	Procavia_capensis
ENSMFAG00000043943	TNRC6C	100	94.899	ENSPCOG00000021451	TNRC6C	100	94.899	Propithecus_coquereli
ENSMFAG00000043943	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSMFAG00000043943	TNRC6C	100	49.194	ENSPNYG00000014477	tnrc6c1	99	48.421	Pundamilia_nyererei
ENSMFAG00000043943	TNRC6C	100	90.420	ENSRNOG00000022395	Tnrc6c	100	90.420	Rattus_norvegicus
ENSMFAG00000043943	TNRC6C	100	99.478	ENSRBIG00000027777	TNRC6C	100	99.478	Rhinopithecus_bieti
ENSMFAG00000043943	TNRC6C	100	99.536	ENSRROG00000042912	TNRC6C	100	99.536	Rhinopithecus_roxellana
ENSMFAG00000043943	TNRC6C	100	97.971	ENSSBOG00000023981	TNRC6C	100	97.971	Saimiri_boliviensis_boliviensis
ENSMFAG00000043943	TNRC6C	54	90.378	ENSSHAG00000018330	-	100	89.730	Sarcophilus_harrisii
ENSMFAG00000043943	TNRC6C	76	56.394	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSMFAG00000043943	TNRC6C	93	57.641	ENSSFOG00015006475	tnrc6c1	99	51.752	Scleropages_formosus
ENSMFAG00000043943	TNRC6C	100	48.947	ENSSMAG00000012761	tnrc6c1	99	50.546	Scophthalmus_maximus
ENSMFAG00000043943	TNRC6C	100	50.828	ENSSDUG00000002366	tnrc6c1	99	49.552	Seriola_dumerili
ENSMFAG00000043943	TNRC6C	100	49.057	ENSSLDG00000025613	tnrc6c1	100	50.139	Seriola_lalandi_dorsalis
ENSMFAG00000043943	TNRC6C	91	89.655	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSMFAG00000043943	TNRC6C	83	86.944	ENSSPUG00000007341	TNRC6C	98	87.014	Sphenodon_punctatus
ENSMFAG00000043943	TNRC6C	79	54.089	ENSSPAG00000014977	tnrc6c1	97	49.196	Stegastes_partitus
ENSMFAG00000043943	TNRC6C	97	90.836	ENSSSCG00000034373	TNRC6C	100	87.987	Sus_scrofa
ENSMFAG00000043943	TNRC6C	100	88.527	ENSTGUG00000007733	TNRC6C	100	86.130	Taeniopygia_guttata
ENSMFAG00000043943	TNRC6C	79	54.986	ENSTRUG00000011685	tnrc6c1	100	49.834	Takifugu_rubripes
ENSMFAG00000043943	TNRC6C	89	52.867	ENSTNIG00000005273	tnrc6c1	100	60.980	Tetraodon_nigroviridis
ENSMFAG00000043943	TNRC6C	67	82.146	ENSTBEG00000005046	TNRC6C	100	82.498	Tupaia_belangeri
ENSMFAG00000043943	TNRC6C	100	91.011	ENSTTRG00000010828	TNRC6C	97	91.070	Tursiops_truncatus
ENSMFAG00000043943	TNRC6C	100	89.349	ENSUMAG00000013614	TNRC6C	99	89.688	Ursus_maritimus
ENSMFAG00000043943	TNRC6C	52	81.093	ENSVPAG00000006765	-	99	81.100	Vicugna_pacos
ENSMFAG00000043943	TNRC6C	100	91.839	ENSVVUG00000015268	TNRC6C	100	91.839	Vulpes_vulpes
ENSMFAG00000043943	TNRC6C	100	75.264	ENSXETG00000019470	tnrc6c	100	74.618	Xenopus_tropicalis
ENSMFAG00000043943	TNRC6C	100	49.828	ENSXMAG00000025971	tnrc6c1	100	49.089	Xiphophorus_maculatus