EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000044852 (Gene tree)
Gene ID: 102119460
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 207909 bases
Position: chr20:14839229-15047137
Accession: 102119460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000027156	R3H	PF01424.22	5.6e-05	1	1
ENSMFAP00000027196	R3H	PF01424.22	6e-05	1	1
ENSMFAP00000027207	RNA_bind	PF08675.11	9.4e-34	1	1
ENSMFAP00000027156	RNA_bind	PF08675.11	1.2e-33	1	1
ENSMFAP00000027196	RNA_bind	PF08675.11	1.3e-33	1	1
ENSMFAP00000027221	RNA_bind	PF08675.11	1.4e-33	1	1
ENSMFAP00000027221	CAF1	PF04857.20	2.7e-78	1	1
ENSMFAP00000027156	CAF1	PF04857.20	3.1e-70	1	1
ENSMFAP00000027196	CAF1	PF04857.20	3.2e-68	1	2
ENSMFAP00000027196	CAF1	PF04857.20	3.2e-68	2	2
ENSMFAP00000027207	CAF1	PF04857.20	1.5e-52	1	2
ENSMFAP00000027207	CAF1	PF04857.20	1.5e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000001380	PARN-202	1782	XM_005591297	ENSMFAP00000027196	593 (aa)	XP_005591354	A0A2K5VR35
ENSMFAT00000001405	PARN-204	1887	-	ENSMFAP00000027221	628 (aa)	-	A0A2K5VR62
ENSMFAT00000001339	PARN-201	3076	XM_015442362	ENSMFAP00000027156	578 (aa)	XP_015297848	A0A2K5VQZ8
ENSMFAT00000001391	PARN-203	1395	-	ENSMFAP00000027207	464 (aa)	-	A0A2K5VR06

Gene Model

Click here to download ENSMFAG00000044852's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000044852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000044852	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSMFAG00000044852	PARN	100	96.610	ENSAMEG00000011208	PARN	100	87.832	Ailuropoda_melanoleuca
ENSMFAG00000044852	PARN	77	82.178	ENSACIG00000000619	parn	83	72.761	Amphilophus_citrinellus
ENSMFAG00000044852	PARN	88	77.966	ENSAOCG00000003465	parn	84	70.152	Amphiprion_ocellaris
ENSMFAG00000044852	PARN	82	77.987	ENSAPEG00000010661	parn	91	77.987	Amphiprion_percula
ENSMFAG00000044852	PARN	94	71.250	ENSATEG00000004661	parn	88	68.438	Anabas_testudineus
ENSMFAG00000044852	PARN	99	87.037	ENSAPLG00000013914	PARN	99	80.472	Anas_platyrhynchos
ENSMFAG00000044852	PARN	100	89.831	ENSACAG00000004973	PARN	100	75.730	Anolis_carolinensis
ENSMFAG00000044852	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSMFAG00000044852	PARN	89	77.966	ENSACLG00000004742	parn	85	70.995	Astatotilapia_calliptera
ENSMFAG00000044852	PARN	86	79.661	ENSAMXG00000012390	parn	96	65.736	Astyanax_mexicanus
ENSMFAG00000044852	PARN	100	98.305	ENSBTAG00000018097	PARN	100	93.599	Bos_taurus
ENSMFAG00000044852	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSMFAG00000044852	PARN	100	94.915	ENSCAFG00000018795	PARN	100	88.125	Canis_familiaris
ENSMFAG00000044852	PARN	100	96.610	ENSCAFG00020024126	PARN	100	88.125	Canis_lupus_dingo
ENSMFAG00000044852	PARN	100	98.305	ENSCHIG00000018143	PARN	100	89.219	Capra_hircus
ENSMFAG00000044852	PARN	60	77.500	ENSCAPG00000007984	PARN	78	64.516	Cavia_aperea
ENSMFAG00000044852	PARN	100	98.305	ENSCPOG00000002263	PARN	100	86.250	Cavia_porcellus
ENSMFAG00000044852	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSMFAG00000044852	PARN	51	35.862	ENSCATG00000033196	PNLDC1	70	35.862	Cercocebus_atys
ENSMFAG00000044852	PARN	89	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSMFAG00000044852	PARN	100	96.610	ENSCLAG00000015406	PARN	99	85.625	Chinchilla_lanigera
ENSMFAG00000044852	PARN	100	100.000	ENSCSAG00000008142	PARN	100	93.906	Chlorocebus_sabaeus
ENSMFAG00000044852	PARN	98	98.077	ENSCHOG00000007014	PARN	100	72.785	Choloepus_hoffmanni
ENSMFAG00000044852	PARN	97	85.561	ENSCPBG00000006609	PARN	97	85.847	Chrysemys_picta_bellii
ENSMFAG00000044852	PARN	78	44.586	ENSCING00000010142	-	99	43.340	Ciona_intestinalis
ENSMFAG00000044852	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSMFAG00000044852	PARN	100	96.610	ENSCGRG00001012096	Parn	100	81.026	Cricetulus_griseus_chok1gshd
ENSMFAG00000044852	PARN	100	96.610	ENSCGRG00000004939	Parn	100	81.026	Cricetulus_griseus_crigri
ENSMFAG00000044852	PARN	94	79.661	ENSCSEG00000002064	parn	100	63.452	Cynoglossus_semilaevis
ENSMFAG00000044852	PARN	87	77.966	ENSCVAG00000014848	parn	83	70.205	Cyprinodon_variegatus
ENSMFAG00000044852	PARN	100	71.186	ENSDARG00000102634	parn	87	68.458	Danio_rerio
ENSMFAG00000044852	PARN	100	98.305	ENSDNOG00000000833	PARN	98	91.367	Dasypus_novemcinctus
ENSMFAG00000044852	PARN	71	95.000	ENSETEG00000014828	-	78	90.494	Echinops_telfairi
ENSMFAG00000044852	PARN	56	30.086	ENSEBUG00000008118	PNLDC1	61	30.086	Eptatretus_burgeri
ENSMFAG00000044852	PARN	76	52.381	ENSEBUG00000007052	PARN	70	70.982	Eptatretus_burgeri
ENSMFAG00000044852	PARN	100	98.305	ENSEASG00005011400	PARN	100	88.438	Equus_asinus_asinus
ENSMFAG00000044852	PARN	100	96.610	ENSECAG00000017792	PARN	100	88.281	Equus_caballus
ENSMFAG00000044852	PARN	84	83.810	ENSEEUG00000010370	PARN	82	83.810	Erinaceus_europaeus
ENSMFAG00000044852	PARN	88	79.661	ENSELUG00000013139	parn	77	69.088	Esox_lucius
ENSMFAG00000044852	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSMFAG00000044852	PARN	98	88.462	ENSFALG00000003911	PARN	98	79.305	Ficedula_albicollis
ENSMFAG00000044852	PARN	100	98.305	ENSFDAG00000009234	PARN	100	85.312	Fukomys_damarensis
ENSMFAG00000044852	PARN	87	79.245	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSMFAG00000044852	PARN	81	76.632	ENSGMOG00000003231	parn	97	73.134	Gadus_morhua
ENSMFAG00000044852	PARN	100	91.525	ENSGALG00000003091	PARN	100	78.416	Gallus_gallus
ENSMFAG00000044852	PARN	86	79.661	ENSGAFG00000011061	parn	84	69.799	Gambusia_affinis
ENSMFAG00000044852	PARN	100	67.802	ENSGACG00000019501	parn	100	62.906	Gasterosteus_aculeatus
ENSMFAG00000044852	PARN	70	79.448	ENSGAGG00000023281	PARN	83	81.505	Gopherus_agassizii
ENSMFAG00000044852	PARN	96	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSMFAG00000044852	PARN	89	77.966	ENSHBUG00000017906	parn	90	75.746	Haplochromis_burtoni
ENSMFAG00000044852	PARN	100	98.305	ENSHGLG00000010886	PARN	100	85.781	Heterocephalus_glaber_female
ENSMFAG00000044852	PARN	100	98.305	ENSHGLG00100014659	PARN	100	85.781	Heterocephalus_glaber_male
ENSMFAG00000044852	PARN	81	72.842	ENSHCOG00000008683	parn	91	70.132	Hippocampus_comes
ENSMFAG00000044852	PARN	86	69.492	ENSIPUG00000012401	parn	84	62.153	Ictalurus_punctatus
ENSMFAG00000044852	PARN	100	96.610	ENSSTOG00000007519	PARN	100	86.760	Ictidomys_tridecemlineatus
ENSMFAG00000044852	PARN	100	98.305	ENSJJAG00000023049	Parn	100	83.594	Jaculus_jaculus
ENSMFAG00000044852	PARN	94	76.271	ENSKMAG00000009462	parn	84	70.990	Kryptolebias_marmoratus
ENSMFAG00000044852	PARN	88	77.966	ENSLBEG00000009167	parn	90	69.440	Labrus_bergylta
ENSMFAG00000044852	PARN	77	81.655	ENSLACG00000004207	PARN	100	72.877	Latimeria_chalumnae
ENSMFAG00000044852	PARN	96	81.356	ENSLOCG00000000715	parn	87	70.462	Lepisosteus_oculatus
ENSMFAG00000044852	PARN	100	98.305	ENSLAFG00000015036	PARN	100	88.438	Loxodonta_africana
ENSMFAG00000044852	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSMFAG00000044852	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSMFAG00000044852	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000044852	PARN	89	77.966	ENSMAMG00000006939	parn	84	69.347	Mastacembelus_armatus
ENSMFAG00000044852	PARN	89	77.966	ENSMZEG00005013590	parn	90	72.560	Maylandia_zebra
ENSMFAG00000044852	PARN	94	100.000	ENSMGAG00000001004	PARN	90	81.959	Meleagris_gallopavo
ENSMFAG00000044852	PARN	95	94.286	ENSMAUG00000008025	Parn	100	77.812	Mesocricetus_auratus
ENSMFAG00000044852	PARN	100	98.305	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSMFAG00000044852	PARN	75	90.762	ENSMOCG00000022211	Parn	100	86.640	Microtus_ochrogaster
ENSMFAG00000044852	PARN	77	81.126	ENSMMOG00000011333	parn	87	73.774	Mola_mola
ENSMFAG00000044852	PARN	75	95.150	ENSMODG00000004915	PARN	99	89.516	Monodelphis_domestica
ENSMFAG00000044852	PARN	80	86.207	ENSMALG00000019426	parn	91	75.233	Monopterus_albus
ENSMFAG00000044852	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	81.875	Mus_caroli
ENSMFAG00000044852	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSMFAG00000044852	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	81.406	Mus_pahari
ENSMFAG00000044852	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	81.875	Mus_spretus
ENSMFAG00000044852	PARN	100	98.305	ENSMPUG00000014464	PARN	100	88.125	Mustela_putorius_furo
ENSMFAG00000044852	PARN	75	94.457	ENSMLUG00000005414	PARN	100	90.283	Myotis_lucifugus
ENSMFAG00000044852	PARN	77	83.389	ENSNBRG00000006805	parn	90	75.614	Neolamprologus_brichardi
ENSMFAG00000044852	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSMFAG00000044852	PARN	93	92.308	ENSMEUG00000008178	-	68	92.308	Notamacropus_eugenii
ENSMFAG00000044852	PARN	98	98.077	ENSOPRG00000012187	PARN	100	83.465	Ochotona_princeps
ENSMFAG00000044852	PARN	100	98.305	ENSODEG00000001617	PARN	100	80.564	Octodon_degus
ENSMFAG00000044852	PARN	100	77.966	ENSONIG00000000151	parn	100	63.692	Oreochromis_niloticus
ENSMFAG00000044852	PARN	82	81.890	ENSOANG00000020155	-	97	82.415	Ornithorhynchus_anatinus
ENSMFAG00000044852	PARN	100	91.522	ENSOCUG00000000322	PARN	100	86.656	Oryctolagus_cuniculus
ENSMFAG00000044852	PARN	93	79.661	ENSORLG00020010313	parn	88	67.705	Oryzias_latipes_hni
ENSMFAG00000044852	PARN	93	79.661	ENSORLG00015000300	parn	88	67.541	Oryzias_latipes_hsok
ENSMFAG00000044852	PARN	88	79.661	ENSOMEG00000019555	parn	97	60.784	Oryzias_melastigma
ENSMFAG00000044852	PARN	75	94.444	ENSOGAG00000014626	PARN	100	90.303	Otolemur_garnettii
ENSMFAG00000044852	PARN	75	97.921	ENSOARG00000007574	PARN	100	93.117	Ovis_aries
ENSMFAG00000044852	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSMFAG00000044852	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSMFAG00000044852	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSMFAG00000044852	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSMFAG00000044852	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSMFAG00000044852	PARN	96	79.661	ENSPKIG00000022807	parn	91	67.295	Paramormyrops_kingsleyae
ENSMFAG00000044852	PARN	98	89.831	ENSPSIG00000014804	PARN	100	83.391	Pelodiscus_sinensis
ENSMFAG00000044852	PARN	79	76.938	ENSPMGG00000014431	parn	75	74.906	Periophthalmus_magnuspinnatus
ENSMFAG00000044852	PARN	100	94.915	ENSPEMG00000018439	Parn	100	78.750	Peromyscus_maniculatus_bairdii
ENSMFAG00000044852	PARN	74	73.776	ENSPMAG00000003956	parn	99	64.423	Petromyzon_marinus
ENSMFAG00000044852	PARN	65	87.864	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSMFAG00000044852	PARN	89	72.467	ENSPFOG00000012823	parn	84	69.360	Poecilia_formosa
ENSMFAG00000044852	PARN	89	72.658	ENSPLAG00000006395	parn	84	69.529	Poecilia_latipinna
ENSMFAG00000044852	PARN	89	72.658	ENSPMEG00000007711	parn	84	69.697	Poecilia_mexicana
ENSMFAG00000044852	PARN	89	72.275	ENSPREG00000000147	parn	84	69.360	Poecilia_reticulata
ENSMFAG00000044852	PARN	100	98.962	ENSPPYG00000007123	PARN	100	92.991	Pongo_abelii
ENSMFAG00000044852	PARN	93	96.154	ENSPCAG00000001741	PARN	100	78.418	Procavia_capensis
ENSMFAG00000044852	PARN	100	98.305	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSMFAG00000044852	PARN	98	98.077	ENSPVAG00000002547	PARN	100	84.992	Pteropus_vampyrus
ENSMFAG00000044852	PARN	89	77.966	ENSPNYG00000006835	parn	90	72.761	Pundamilia_nyererei
ENSMFAG00000044852	PARN	90	73.180	ENSPNAG00000018905	parn	83	73.180	Pygocentrus_nattereri
ENSMFAG00000044852	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSMFAG00000044852	PARN	72	99.399	ENSRBIG00000018726	PARN	100	99.399	Rhinopithecus_bieti
ENSMFAG00000044852	PARN	72	99.399	ENSRROG00000011162	-	100	99.399	Rhinopithecus_roxellana
ENSMFAG00000044852	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSMFAG00000044852	PARN	63	93.923	ENSSHAG00000008493	PARN	94	87.799	Sarcophilus_harrisii
ENSMFAG00000044852	PARN	94	79.661	ENSSFOG00015014165	parn	96	69.088	Scleropages_formosus
ENSMFAG00000044852	PARN	95	69.231	ENSSMAG00000000685	parn	87	69.373	Scophthalmus_maximus
ENSMFAG00000044852	PARN	94	76.271	ENSSDUG00000014555	parn	83	70.307	Seriola_dumerili
ENSMFAG00000044852	PARN	100	80.796	ENSSARG00000014339	PARN	99	80.796	Sorex_araneus
ENSMFAG00000044852	PARN	100	89.831	ENSSPUG00000007719	PARN	100	80.625	Sphenodon_punctatus
ENSMFAG00000044852	PARN	88	77.966	ENSSPAG00000007095	parn	86	72.023	Stegastes_partitus
ENSMFAG00000044852	PARN	100	98.305	ENSSSCG00000007878	PARN	89	87.500	Sus_scrofa
ENSMFAG00000044852	PARN	99	87.037	ENSTGUG00000004971	PARN	99	79.055	Taeniopygia_guttata
ENSMFAG00000044852	PARN	58	30.117	ENSTGUG00000011418	PNLDC1	65	30.117	Taeniopygia_guttata
ENSMFAG00000044852	PARN	100	79.661	ENSTNIG00000008252	parn	100	65.741	Tetraodon_nigroviridis
ENSMFAG00000044852	PARN	100	79.931	ENSTBEG00000010407	PARN	99	79.931	Tupaia_belangeri
ENSMFAG00000044852	PARN	98	98.077	ENSTTRG00000002843	PARN	100	84.252	Tursiops_truncatus
ENSMFAG00000044852	PARN	75	83.945	ENSUAMG00000008283	PARN	94	83.095	Ursus_americanus
ENSMFAG00000044852	PARN	100	98.305	ENSUMAG00000004527	PARN	100	88.281	Ursus_maritimus
ENSMFAG00000044852	PARN	95	98.077	ENSVPAG00000008968	PARN	100	86.319	Vicugna_pacos
ENSMFAG00000044852	PARN	100	96.610	ENSVVUG00000019509	PARN	100	88.750	Vulpes_vulpes
ENSMFAG00000044852	PARN	100	81.967	ENSXETG00000010994	parn	100	79.278	Xenopus_tropicalis
ENSMFAG00000044852	PARN	86	79.661	ENSXCOG00000015990	parn	96	67.973	Xiphophorus_couchianus
ENSMFAG00000044852	PARN	88	79.661	ENSXMAG00000014783	parn	84	70.034	Xiphophorus_maculatus