EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000045006 (Gene tree)
Gene ID: 102143860
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 373001 bases
Position: chr2:171968797-172341797
Accession: 102143860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000027199	CMS1	PF14617.6	7.3e-33	1	1
ENSMFAP00000027204	CMS1	PF14617.6	9.1e-33	1	1
ENSMFAP00000027199	DEAD	PF00270.29	1.1e-05	1	1
ENSMFAP00000027204	DEAD	PF00270.29	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000001388	CMSS1-202	840	XM_005548320	ENSMFAP00000027204	279 (aa)	XP_005548377	G7NZ84
ENSMFAT00000001383	CMSS1-201	1325	XM_005548319	ENSMFAP00000027199	261 (aa)	XP_005548376	A0A2K5VQY3

Gene Model

Click here to download ENSMFAG00000045006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000045006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000045006	CMSS1	100	96.935	ENSG00000184220	CMSS1	100	96.935	Homo_sapiens
ENSMFAG00000045006	CMSS1	77	64.356	ENSAPOG00000010604	cmss1	82	64.356	Acanthochromis_polyacanthus
ENSMFAG00000045006	CMSS1	99	89.961	ENSAMEG00000004092	CMSS1	100	89.961	Ailuropoda_melanoleuca
ENSMFAG00000045006	CMSS1	77	53.960	ENSACIG00000021854	cmss1	86	48.361	Amphilophus_citrinellus
ENSMFAG00000045006	CMSS1	100	50.495	ENSAOCG00000013361	cmss1	100	51.839	Amphiprion_ocellaris
ENSMFAG00000045006	CMSS1	77	64.356	ENSAPEG00000005829	cmss1	100	51.667	Amphiprion_percula
ENSMFAG00000045006	CMSS1	100	52.249	ENSATEG00000008209	cmss1	100	53.767	Anabas_testudineus
ENSMFAG00000045006	CMSS1	88	69.130	ENSAPLG00000010542	CMSS1	100	69.130	Anas_platyrhynchos
ENSMFAG00000045006	CMSS1	99	61.940	ENSACAG00000011065	CMSS1	99	61.481	Anolis_carolinensis
ENSMFAG00000045006	CMSS1	100	94.286	ENSANAG00000023565	CMSS1	100	94.286	Aotus_nancymaae
ENSMFAG00000045006	CMSS1	100	48.684	ENSACLG00000027294	cmss1	100	49.671	Astatotilapia_calliptera
ENSMFAG00000045006	CMSS1	100	45.333	ENSAMXG00000002046	cmss1	100	46.622	Astyanax_mexicanus
ENSMFAG00000045006	CMSS1	100	87.814	ENSBTAG00000013663	CMSS1	100	87.814	Bos_taurus
ENSMFAG00000045006	CMSS1	100	93.929	ENSCJAG00000000610	CMSS1	100	93.929	Callithrix_jacchus
ENSMFAG00000045006	CMSS1	100	90.805	ENSCAFG00000009230	CMSS1	95	90.805	Canis_familiaris
ENSMFAG00000045006	CMSS1	89	84.914	ENSCAFG00020024156	-	76	81.224	Canis_lupus_dingo
ENSMFAG00000045006	CMSS1	98	91.440	ENSCAFG00020009464	-	95	91.120	Canis_lupus_dingo
ENSMFAG00000045006	CMSS1	98	89.105	ENSCHIG00000013003	CMSS1	93	89.105	Capra_hircus
ENSMFAG00000045006	CMSS1	99	90.734	ENSTSYG00000009266	CMSS1	99	90.734	Carlito_syrichta
ENSMFAG00000045006	CMSS1	85	73.362	ENSCAPG00000013584	CMSS1	100	73.799	Cavia_aperea
ENSMFAG00000045006	CMSS1	100	87.097	ENSCPOG00000014680	CMSS1	100	87.097	Cavia_porcellus
ENSMFAG00000045006	CMSS1	100	95.420	ENSCCAG00000034685	CMSS1	100	95.420	Cebus_capucinus
ENSMFAG00000045006	CMSS1	100	99.617	ENSCATG00000031980	CMSS1	100	99.617	Cercocebus_atys
ENSMFAG00000045006	CMSS1	88	94.323	ENSCLAG00000011241	CMSS1	98	94.323	Chinchilla_lanigera
ENSMFAG00000045006	CMSS1	94	99.592	ENSCSAG00000006024	CMSS1	100	99.592	Chlorocebus_sabaeus
ENSMFAG00000045006	CMSS1	100	69.176	ENSCHOG00000012098	CMSS1	100	69.176	Choloepus_hoffmanni
ENSMFAG00000045006	CMSS1	72	40.816	ENSCING00000014848	-	100	41.176	Ciona_intestinalis
ENSMFAG00000045006	CMSS1	100	98.925	ENSCANG00000031337	CMSS1	100	98.925	Colobus_angolensis_palliatus
ENSMFAG00000045006	CMSS1	100	82.437	ENSCGRG00001014305	Cmss1	100	82.437	Cricetulus_griseus_chok1gshd
ENSMFAG00000045006	CMSS1	98	83.594	ENSCGRG00000006722	Cmss1	99	83.594	Cricetulus_griseus_crigri
ENSMFAG00000045006	CMSS1	100	50.505	ENSCSEG00000004958	cmss1	100	50.658	Cynoglossus_semilaevis
ENSMFAG00000045006	CMSS1	100	50.865	ENSCVAG00000005039	cmss1	100	52.234	Cyprinodon_variegatus
ENSMFAG00000045006	CMSS1	100	46.801	ENSDARG00000112579	cmss1	100	46.575	Danio_rerio
ENSMFAG00000045006	CMSS1	100	85.878	ENSDNOG00000040418	CMSS1	93	85.878	Dasypus_novemcinctus
ENSMFAG00000045006	CMSS1	100	87.455	ENSDORG00000010461	Cmss1	100	87.455	Dipodomys_ordii
ENSMFAG00000045006	CMSS1	51	49.242	ENSEBUG00000002156	-	96	49.242	Eptatretus_burgeri
ENSMFAG00000045006	CMSS1	99	84.231	ENSEASG00005010966	CMSS1	99	93.151	Equus_asinus_asinus
ENSMFAG00000045006	CMSS1	98	90.661	ENSECAG00000015662	CMSS1	99	92.478	Equus_caballus
ENSMFAG00000045006	CMSS1	100	56.631	ENSEEUG00000007624	-	100	56.631	Erinaceus_europaeus
ENSMFAG00000045006	CMSS1	92	57.083	ENSELUG00000019459	cmss1	100	51.000	Esox_lucius
ENSMFAG00000045006	CMSS1	100	92.832	ENSFCAG00000044577	CMSS1	100	92.832	Felis_catus
ENSMFAG00000045006	CMSS1	91	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSMFAG00000045006	CMSS1	87	91.667	ENSFDAG00000012577	CMSS1	100	91.667	Fukomys_damarensis
ENSMFAG00000045006	CMSS1	87	60.173	ENSFHEG00000012008	cmss1	95	60.173	Fundulus_heteroclitus
ENSMFAG00000045006	CMSS1	99	49.492	ENSGMOG00000016729	cmss1	100	52.083	Gadus_morhua
ENSMFAG00000045006	CMSS1	100	63.019	ENSGALG00000015267	CMSS1	100	63.359	Gallus_gallus
ENSMFAG00000045006	CMSS1	79	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSMFAG00000045006	CMSS1	99	47.872	ENSGACG00000002798	cmss1	100	49.291	Gasterosteus_aculeatus
ENSMFAG00000045006	CMSS1	91	70.464	ENSGAGG00000019861	CMSS1	100	63.082	Gopherus_agassizii
ENSMFAG00000045006	CMSS1	100	98.084	ENSGGOG00000014125	CMSS1	100	98.084	Gorilla_gorilla
ENSMFAG00000045006	CMSS1	100	48.845	ENSHBUG00000008431	cmss1	100	49.505	Haplochromis_burtoni
ENSMFAG00000045006	CMSS1	97	85.771	ENSHGLG00000019481	CMSS1	100	85.771	Heterocephalus_glaber_female
ENSMFAG00000045006	CMSS1	98	85.992	ENSHGLG00100010314	CMSS1	100	85.992	Heterocephalus_glaber_male
ENSMFAG00000045006	CMSS1	100	52.318	ENSHCOG00000003222	cmss1	100	52.333	Hippocampus_comes
ENSMFAG00000045006	CMSS1	100	47.586	ENSIPUG00000011591	cmss1	100	47.945	Ictalurus_punctatus
ENSMFAG00000045006	CMSS1	100	90.681	ENSSTOG00000019366	CMSS1	100	90.681	Ictidomys_tridecemlineatus
ENSMFAG00000045006	CMSS1	100	83.871	ENSJJAG00000014894	Cmss1	100	83.871	Jaculus_jaculus
ENSMFAG00000045006	CMSS1	77	53.960	ENSKMAG00000002390	cmss1	81	53.960	Kryptolebias_marmoratus
ENSMFAG00000045006	CMSS1	85	52.917	ENSLBEG00000006298	cmss1	83	58.621	Labrus_bergylta
ENSMFAG00000045006	CMSS1	87	64.348	ENSLACG00000009293	CMSS1	100	64.348	Latimeria_chalumnae
ENSMFAG00000045006	CMSS1	100	50.352	ENSLOCG00000009391	cmss1	100	51.056	Lepisosteus_oculatus
ENSMFAG00000045006	CMSS1	87	91.228	ENSLAFG00000017509	CMSS1	100	91.228	Loxodonta_africana
ENSMFAG00000045006	CMSS1	100	99.642	ENSMMUG00000002939	CMSS1	100	99.642	Macaca_mulatta
ENSMFAG00000045006	CMSS1	100	99.642	ENSMNEG00000031315	CMSS1	100	99.642	Macaca_nemestrina
ENSMFAG00000045006	CMSS1	100	99.283	ENSMLEG00000033660	CMSS1	100	99.283	Mandrillus_leucophaeus
ENSMFAG00000045006	CMSS1	100	51.505	ENSMAMG00000017176	cmss1	100	52.218	Mastacembelus_armatus
ENSMFAG00000045006	CMSS1	100	48.684	ENSMZEG00005021886	cmss1	100	49.671	Maylandia_zebra
ENSMFAG00000045006	CMSS1	87	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSMFAG00000045006	CMSS1	100	60.573	ENSMAUG00000020609	Cmss1	100	60.573	Mesocricetus_auratus
ENSMFAG00000045006	CMSS1	100	92.473	ENSMICG00000048977	CMSS1	100	92.473	Microcebus_murinus
ENSMFAG00000045006	CMSS1	100	81.720	ENSMOCG00000021937	Cmss1	100	81.720	Microtus_ochrogaster
ENSMFAG00000045006	CMSS1	77	61.881	ENSMMOG00000019794	cmss1	95	57.082	Mola_mola
ENSMFAG00000045006	CMSS1	97	74.016	ENSMODG00000002275	CMSS1	97	72.692	Monodelphis_domestica
ENSMFAG00000045006	CMSS1	100	52.740	ENSMALG00000004250	cmss1	100	52.234	Monopterus_albus
ENSMFAG00000045006	CMSS1	100	82.143	MGP_CAROLIEiJ_G0020824	Cmss1	100	82.143	Mus_caroli
ENSMFAG00000045006	CMSS1	100	82.857	ENSMUSG00000022748	Cmss1	100	82.857	Mus_musculus
ENSMFAG00000045006	CMSS1	100	81.429	MGP_PahariEiJ_G0016524	Cmss1	100	81.429	Mus_pahari
ENSMFAG00000045006	CMSS1	100	82.143	MGP_SPRETEiJ_G0021724	Cmss1	100	82.143	Mus_spretus
ENSMFAG00000045006	CMSS1	99	92.692	ENSMPUG00000011324	CMSS1	100	92.692	Mustela_putorius_furo
ENSMFAG00000045006	CMSS1	99	91.571	ENSMLUG00000001131	CMSS1	99	91.923	Myotis_lucifugus
ENSMFAG00000045006	CMSS1	99	86.047	ENSNGAG00000020316	Cmss1	100	84.946	Nannospalax_galili
ENSMFAG00000045006	CMSS1	100	48.355	ENSNBRG00000003095	cmss1	100	49.671	Neolamprologus_brichardi
ENSMFAG00000045006	CMSS1	100	98.851	ENSNLEG00000034172	CMSS1	100	98.851	Nomascus_leucogenys
ENSMFAG00000045006	CMSS1	87	67.105	ENSMEUG00000014505	CMSS1	100	67.105	Notamacropus_eugenii
ENSMFAG00000045006	CMSS1	100	91.398	ENSOPRG00000002986	CMSS1	100	91.398	Ochotona_princeps
ENSMFAG00000045006	CMSS1	100	74.910	ENSODEG00000001853	-	100	74.910	Octodon_degus
ENSMFAG00000045006	CMSS1	100	81.495	ENSODEG00000003558	-	100	81.495	Octodon_degus
ENSMFAG00000045006	CMSS1	100	86.022	ENSODEG00000005226	-	100	86.022	Octodon_degus
ENSMFAG00000045006	CMSS1	100	70.609	ENSODEG00000009446	-	100	70.609	Octodon_degus
ENSMFAG00000045006	CMSS1	77	60.891	ENSONIG00000006678	cmss1	88	55.144	Oreochromis_niloticus
ENSMFAG00000045006	CMSS1	98	72.692	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSMFAG00000045006	CMSS1	100	91.188	ENSOCUG00000025366	CMSS1	95	91.188	Oryctolagus_cuniculus
ENSMFAG00000045006	CMSS1	100	53.082	ENSORLG00000020340	cmss1	100	54.082	Oryzias_latipes
ENSMFAG00000045006	CMSS1	88	55.022	ENSORLG00020012235	cmss1	99	54.936	Oryzias_latipes_hni
ENSMFAG00000045006	CMSS1	77	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSMFAG00000045006	CMSS1	100	53.793	ENSOMEG00000012555	cmss1	100	53.979	Oryzias_melastigma
ENSMFAG00000045006	CMSS1	87	92.544	ENSOGAG00000002045	CMSS1	100	92.544	Otolemur_garnettii
ENSMFAG00000045006	CMSS1	98	89.147	ENSOARG00000017899	CMSS1	89	89.147	Ovis_aries
ENSMFAG00000045006	CMSS1	100	97.318	ENSPPAG00000038515	CMSS1	95	98.062	Pan_paniscus
ENSMFAG00000045006	CMSS1	100	92.832	ENSPPRG00000016767	CMSS1	100	92.832	Panthera_pardus
ENSMFAG00000045006	CMSS1	100	92.473	ENSPTIG00000018274	CMSS1	100	92.473	Panthera_tigris_altaica
ENSMFAG00000045006	CMSS1	100	97.318	ENSPTRG00000015157	CMSS1	100	97.551	Pan_troglodytes
ENSMFAG00000045006	CMSS1	100	93.870	ENSPANG00000019980	CMSS1	99	94.574	Papio_anubis
ENSMFAG00000045006	CMSS1	94	55.882	ENSPKIG00000012609	cmss1	97	56.818	Paramormyrops_kingsleyae
ENSMFAG00000045006	CMSS1	88	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSMFAG00000045006	CMSS1	90	55.833	ENSPMGG00000010286	cmss1	100	57.203	Periophthalmus_magnuspinnatus
ENSMFAG00000045006	CMSS1	100	83.214	ENSPEMG00000016384	Cmss1	100	83.214	Peromyscus_maniculatus_bairdii
ENSMFAG00000045006	CMSS1	78	52.451	ENSPMAG00000001146	cmss1	99	52.970	Petromyzon_marinus
ENSMFAG00000045006	CMSS1	100	72.348	ENSPCIG00000015656	CMSS1	100	72.348	Phascolarctos_cinereus
ENSMFAG00000045006	CMSS1	100	51.748	ENSPFOG00000016849	cmss1	100	52.098	Poecilia_formosa
ENSMFAG00000045006	CMSS1	100	51.399	ENSPLAG00000008323	cmss1	100	51.748	Poecilia_latipinna
ENSMFAG00000045006	CMSS1	100	49.836	ENSPMEG00000021020	cmss1	100	52.759	Poecilia_mexicana
ENSMFAG00000045006	CMSS1	77	62.376	ENSPREG00000007618	cmss1	69	62.376	Poecilia_reticulata
ENSMFAG00000045006	CMSS1	100	96.057	ENSPPYG00000013606	CMSS1	100	96.057	Pongo_abelii
ENSMFAG00000045006	CMSS1	100	91.756	ENSPCOG00000020035	CMSS1	100	91.756	Propithecus_coquereli
ENSMFAG00000045006	CMSS1	100	78.853	ENSPVAG00000017031	CMSS1	100	78.853	Pteropus_vampyrus
ENSMFAG00000045006	CMSS1	91	48.561	ENSPNYG00000013428	cmss1	97	49.640	Pundamilia_nyererei
ENSMFAG00000045006	CMSS1	100	47.508	ENSPNAG00000007912	cmss1	100	48.173	Pygocentrus_nattereri
ENSMFAG00000045006	CMSS1	99	81.923	ENSRNOG00000027888	Cmss1	100	81.923	Rattus_norvegicus
ENSMFAG00000045006	CMSS1	100	98.208	ENSRBIG00000037931	CMSS1	100	98.208	Rhinopithecus_bieti
ENSMFAG00000045006	CMSS1	100	98.208	ENSRROG00000042910	CMSS1	100	98.208	Rhinopithecus_roxellana
ENSMFAG00000045006	CMSS1	100	94.656	ENSSBOG00000030980	CMSS1	100	94.656	Saimiri_boliviensis_boliviensis
ENSMFAG00000045006	CMSS1	95	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSMFAG00000045006	CMSS1	100	52.862	ENSSFOG00015001509	cmss1	100	54.639	Scleropages_formosus
ENSMFAG00000045006	CMSS1	100	50.859	ENSSMAG00000001653	cmss1	100	51.505	Scophthalmus_maximus
ENSMFAG00000045006	CMSS1	100	51.864	ENSSDUG00000007719	cmss1	100	53.767	Seriola_dumerili
ENSMFAG00000045006	CMSS1	79	63.285	ENSSLDG00000012300	cmss1	75	58.889	Seriola_lalandi_dorsalis
ENSMFAG00000045006	CMSS1	100	75.357	ENSSARG00000003584	CMSS1	100	75.357	Sorex_araneus
ENSMFAG00000045006	CMSS1	87	69.912	ENSSPUG00000003865	CMSS1	100	69.912	Sphenodon_punctatus
ENSMFAG00000045006	CMSS1	79	63.592	ENSSPAG00000019182	cmss1	82	54.682	Stegastes_partitus
ENSMFAG00000045006	CMSS1	100	92.832	ENSSSCG00000011970	CMSS1	100	92.832	Sus_scrofa
ENSMFAG00000045006	CMSS1	88	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSMFAG00000045006	CMSS1	100	51.579	ENSTRUG00000015265	cmss1	100	52.281	Takifugu_rubripes
ENSMFAG00000045006	CMSS1	77	55.941	ENSTNIG00000002880	cmss1	73	55.941	Tetraodon_nigroviridis
ENSMFAG00000045006	CMSS1	100	60.357	ENSTBEG00000016722	CMSS1	100	60.357	Tupaia_belangeri
ENSMFAG00000045006	CMSS1	100	87.455	ENSTTRG00000001562	CMSS1	100	87.455	Tursiops_truncatus
ENSMFAG00000045006	CMSS1	99	91.506	ENSUAMG00000024209	CMSS1	100	94.619	Ursus_americanus
ENSMFAG00000045006	CMSS1	99	91.473	ENSUMAG00000001983	CMSS1	99	91.085	Ursus_maritimus
ENSMFAG00000045006	CMSS1	100	68.459	ENSVPAG00000000263	CMSS1	100	68.459	Vicugna_pacos
ENSMFAG00000045006	CMSS1	94	90.650	ENSVVUG00000021647	-	100	90.650	Vulpes_vulpes
ENSMFAG00000045006	CMSS1	83	93.056	ENSVVUG00000007776	-	85	93.056	Vulpes_vulpes
ENSMFAG00000045006	CMSS1	100	54.448	ENSXETG00000011858	cmss1	100	54.448	Xenopus_tropicalis
ENSMFAG00000045006	CMSS1	80	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSMFAG00000045006	CMSS1	80	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus