EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMFAG00000046097 (Gene tree)
Gene ID: 101867012
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Plus strand
Length: 79101 bases
Position: chr13:23322849-23401949
Accession: 101867012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000039897	RNA_pol_Rpb1_5	PF04998.17	6.5e-104	1	1
ENSMFAP00000039897	RNA_pol_Rpb1_4	PF05000.17	1.3e-25	1	1
ENSMFAP00000039897	RNA_pol_Rpb1_2	PF00623.20	1.9e-70	1	1
ENSMFAP00000039897	RNA_pol_Rpb1_3	PF04983.18	1e-35	1	1
ENSMFAP00000039897	RNA_pol_Rpb1_1	PF04997.12	1.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000014162	POLR1A-201	8503	XM_005575390	ENSMFAP00000039897	1720 (aa)	XP_005575447	G8F3R2

Gene Model

Click here to download ENSMFAG00000046097's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000046097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMFAG00000046097	POLR1A	62	32.796	ENSMFAG00000032218	POLR3A	70	32.796

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000046097	POLR1A	100	97.791	ENSG00000068654	POLR1A	100	97.791	Homo_sapiens
ENSMFAG00000046097	POLR1A	69	67.845	ENSAPOG00000017945	polr1a	99	68.182	Acanthochromis_polyacanthus
ENSMFAG00000046097	POLR1A	100	91.628	ENSAMEG00000005807	POLR1A	100	92.623	Ailuropoda_melanoleuca
ENSMFAG00000046097	POLR1A	100	63.594	ENSACIG00000022147	polr1a	100	62.841	Amphilophus_citrinellus
ENSMFAG00000046097	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.239	Amphiprion_ocellaris
ENSMFAG00000046097	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSMFAG00000046097	POLR1A	100	66.532	ENSATEG00000016773	polr1a	100	65.723	Anabas_testudineus
ENSMFAG00000046097	POLR1A	86	73.171	ENSAPLG00000013871	POLR1A	99	73.171	Anas_platyrhynchos
ENSMFAG00000046097	POLR1A	99	69.700	ENSACAG00000012141	POLR1A	99	68.772	Anolis_carolinensis
ENSMFAG00000046097	POLR1A	100	95.174	ENSANAG00000033927	POLR1A	100	95.000	Aotus_nancymaae
ENSMFAG00000046097	POLR1A	100	62.212	ENSACLG00000020541	polr1a	100	61.600	Astatotilapia_calliptera
ENSMFAG00000046097	POLR1A	100	90.413	ENSBTAG00000006481	POLR1A	100	90.413	Bos_taurus
ENSMFAG00000046097	POLR1A	99	38.522	WBGene00012999	rpoa-1	98	38.181	Caenorhabditis_elegans
ENSMFAG00000046097	POLR1A	100	94.884	ENSCJAG00000019547	POLR1A	100	94.884	Callithrix_jacchus
ENSMFAG00000046097	POLR1A	100	91.004	ENSCAFG00000007613	POLR1A	100	90.877	Canis_familiaris
ENSMFAG00000046097	POLR1A	100	90.799	ENSCAFG00020014752	POLR1A	100	90.672	Canis_lupus_dingo
ENSMFAG00000046097	POLR1A	100	88.355	ENSCHIG00000018204	POLR1A	100	88.297	Capra_hircus
ENSMFAG00000046097	POLR1A	100	90.529	ENSTSYG00000002761	POLR1A	100	90.122	Carlito_syrichta
ENSMFAG00000046097	POLR1A	97	84.317	ENSCAPG00000010132	POLR1A	100	83.990	Cavia_aperea
ENSMFAG00000046097	POLR1A	100	88.850	ENSCPOG00000012350	POLR1A	100	88.676	Cavia_porcellus
ENSMFAG00000046097	POLR1A	100	95.465	ENSCCAG00000019839	POLR1A	100	95.465	Cebus_capucinus
ENSMFAG00000046097	POLR1A	100	99.709	ENSCATG00000029786	POLR1A	100	99.709	Cercocebus_atys
ENSMFAG00000046097	POLR1A	100	89.333	ENSCLAG00000005187	POLR1A	100	88.870	Chinchilla_lanigera
ENSMFAG00000046097	POLR1A	100	99.477	ENSCSAG00000016251	POLR1A	100	99.477	Chlorocebus_sabaeus
ENSMFAG00000046097	POLR1A	99	74.332	ENSCPBG00000001115	POLR1A	99	74.375	Chrysemys_picta_bellii
ENSMFAG00000046097	POLR1A	99	47.045	ENSCSAVG00000007184	-	99	46.784	Ciona_savignyi
ENSMFAG00000046097	POLR1A	100	96.223	ENSCANG00000031785	POLR1A	100	96.223	Colobus_angolensis_palliatus
ENSMFAG00000046097	POLR1A	96	89.507	ENSCGRG00001006651	Polr1a	100	83.092	Cricetulus_griseus_chok1gshd
ENSMFAG00000046097	POLR1A	60	86.320	ENSCGRG00000010834	Polr1a	100	86.750	Cricetulus_griseus_crigri
ENSMFAG00000046097	POLR1A	100	62.181	ENSCSEG00000020190	polr1a	100	62.007	Cynoglossus_semilaevis
ENSMFAG00000046097	POLR1A	100	64.551	ENSCVAG00000020941	polr1a	100	65.122	Cyprinodon_variegatus
ENSMFAG00000046097	POLR1A	100	66.918	ENSDARG00000098375	polr1a	100	66.589	Danio_rerio
ENSMFAG00000046097	POLR1A	100	83.362	ENSDNOG00000010829	POLR1A	100	82.841	Dasypus_novemcinctus
ENSMFAG00000046097	POLR1A	100	87.854	ENSDORG00000008298	Polr1a	100	87.681	Dipodomys_ordii
ENSMFAG00000046097	POLR1A	80	44.341	FBgn0019938	RpI1	99	43.180	Drosophila_melanogaster
ENSMFAG00000046097	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSMFAG00000046097	POLR1A	88	66.667	ENSEBUG00000005667	-	99	66.667	Eptatretus_burgeri
ENSMFAG00000046097	POLR1A	100	92.384	ENSEASG00005001625	POLR1A	100	92.384	Equus_asinus_asinus
ENSMFAG00000046097	POLR1A	100	92.384	ENSECAG00000030510	-	100	93.451	Equus_caballus
ENSMFAG00000046097	POLR1A	100	92.384	ENSECAG00000036306	-	100	93.451	Equus_caballus
ENSMFAG00000046097	POLR1A	100	92.384	ENSECAG00000010092	POLR1A	100	93.451	Equus_caballus
ENSMFAG00000046097	POLR1A	81	94.681	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSMFAG00000046097	POLR1A	100	67.033	ENSELUG00000012769	polr1a	99	67.033	Esox_lucius
ENSMFAG00000046097	POLR1A	100	91.860	ENSFCAG00000008966	POLR1A	100	91.686	Felis_catus
ENSMFAG00000046097	POLR1A	99	71.202	ENSFALG00000010082	POLR1A	99	70.303	Ficedula_albicollis
ENSMFAG00000046097	POLR1A	100	89.141	ENSFDAG00000013726	POLR1A	100	88.386	Fukomys_damarensis
ENSMFAG00000046097	POLR1A	100	62.159	ENSFHEG00000005996	polr1a	100	61.979	Fundulus_heteroclitus
ENSMFAG00000046097	POLR1A	100	59.907	ENSGMOG00000002230	polr1a	100	59.640	Gadus_morhua
ENSMFAG00000046097	POLR1A	90	69.621	ENSGALG00000038160	-	99	69.750	Gallus_gallus
ENSMFAG00000046097	POLR1A	100	65.023	ENSGAFG00000015266	polr1a	100	64.815	Gambusia_affinis
ENSMFAG00000046097	POLR1A	100	65.167	ENSGACG00000018791	polr1a	100	64.642	Gasterosteus_aculeatus
ENSMFAG00000046097	POLR1A	89	74.919	ENSGAGG00000004984	-	96	80.405	Gopherus_agassizii
ENSMFAG00000046097	POLR1A	100	97.849	ENSGGOG00000001788	POLR1A	100	97.849	Gorilla_gorilla
ENSMFAG00000046097	POLR1A	90	64.257	ENSHBUG00000020021	polr1a	99	64.457	Haplochromis_burtoni
ENSMFAG00000046097	POLR1A	100	89.373	ENSHGLG00000006334	POLR1A	100	89.199	Heterocephalus_glaber_female
ENSMFAG00000046097	POLR1A	100	89.114	ENSHGLG00100006614	POLR1A	100	88.940	Heterocephalus_glaber_male
ENSMFAG00000046097	POLR1A	100	62.061	ENSHCOG00000003345	polr1a	100	62.139	Hippocampus_comes
ENSMFAG00000046097	POLR1A	100	66.165	ENSIPUG00000013174	polr1a	100	65.378	Ictalurus_punctatus
ENSMFAG00000046097	POLR1A	99	87.609	ENSSTOG00000012580	POLR1A	99	87.318	Ictidomys_tridecemlineatus
ENSMFAG00000046097	POLR1A	100	87.594	ENSJJAG00000013113	Polr1a	100	87.420	Jaculus_jaculus
ENSMFAG00000046097	POLR1A	100	66.144	ENSKMAG00000007399	polr1a	100	65.563	Kryptolebias_marmoratus
ENSMFAG00000046097	POLR1A	95	68.417	ENSLBEG00000015401	polr1a	99	67.852	Labrus_bergylta
ENSMFAG00000046097	POLR1A	53	76.279	ENSLACG00000003218	polr1a	100	76.279	Latimeria_chalumnae
ENSMFAG00000046097	POLR1A	100	70.531	ENSLOCG00000010881	polr1a	100	70.242	Lepisosteus_oculatus
ENSMFAG00000046097	POLR1A	100	89.931	ENSLAFG00000014948	POLR1A	100	90.046	Loxodonta_africana
ENSMFAG00000046097	POLR1A	100	99.884	ENSMMUG00000015815	POLR1A	100	99.884	Macaca_mulatta
ENSMFAG00000046097	POLR1A	100	99.942	ENSMNEG00000043313	POLR1A	100	99.942	Macaca_nemestrina
ENSMFAG00000046097	POLR1A	100	99.070	ENSMLEG00000042428	POLR1A	100	99.070	Mandrillus_leucophaeus
ENSMFAG00000046097	POLR1A	100	65.879	ENSMAMG00000016565	polr1a	100	66.106	Mastacembelus_armatus
ENSMFAG00000046097	POLR1A	100	65.875	ENSMZEG00005004915	polr1a	100	65.394	Maylandia_zebra
ENSMFAG00000046097	POLR1A	99	69.217	ENSMGAG00000013111	POLR1A	99	69.333	Meleagris_gallopavo
ENSMFAG00000046097	POLR1A	92	87.272	ENSMAUG00000008497	Polr1a	100	87.618	Mesocricetus_auratus
ENSMFAG00000046097	POLR1A	100	92.853	ENSMICG00000000757	POLR1A	100	92.562	Microcebus_murinus
ENSMFAG00000046097	POLR1A	100	87.319	ENSMOCG00000000122	Polr1a	100	87.261	Microtus_ochrogaster
ENSMFAG00000046097	POLR1A	100	65.081	ENSMMOG00000010216	polr1a	100	64.655	Mola_mola
ENSMFAG00000046097	POLR1A	100	75.431	ENSMODG00000009335	POLR1A	100	75.029	Monodelphis_domestica
ENSMFAG00000046097	POLR1A	100	65.875	ENSMALG00000013363	polr1a	100	65.112	Monopterus_albus
ENSMFAG00000046097	POLR1A	100	85.450	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.640	Mus_caroli
ENSMFAG00000046097	POLR1A	100	85.987	ENSMUSG00000049553	Polr1a	100	85.929	Mus_musculus
ENSMFAG00000046097	POLR1A	100	86.508	MGP_PahariEiJ_G0022230	Polr1a	100	86.393	Mus_pahari
ENSMFAG00000046097	POLR1A	100	84.966	MGP_SPRETEiJ_G0029499	Polr1a	100	84.760	Mus_spretus
ENSMFAG00000046097	POLR1A	100	91.221	ENSMPUG00000009135	POLR1A	100	91.105	Mustela_putorius_furo
ENSMFAG00000046097	POLR1A	100	89.994	ENSMLUG00000015723	POLR1A	100	89.647	Myotis_lucifugus
ENSMFAG00000046097	POLR1A	100	87.760	ENSNGAG00000017907	Polr1a	100	88.137	Nannospalax_galili
ENSMFAG00000046097	POLR1A	100	65.283	ENSNBRG00000000519	polr1a	100	65.587	Neolamprologus_brichardi
ENSMFAG00000046097	POLR1A	100	95.544	ENSNLEG00000002264	POLR1A	100	95.544	Nomascus_leucogenys
ENSMFAG00000046097	POLR1A	75	93.701	ENSMEUG00000011665	-	75	93.701	Notamacropus_eugenii
ENSMFAG00000046097	POLR1A	99	82.981	ENSOPRG00000008269	POLR1A	100	82.277	Ochotona_princeps
ENSMFAG00000046097	POLR1A	100	89.547	ENSODEG00000003542	POLR1A	100	89.082	Octodon_degus
ENSMFAG00000046097	POLR1A	100	66.184	ENSONIG00000015895	polr1a	100	65.953	Oreochromis_niloticus
ENSMFAG00000046097	POLR1A	100	91.110	ENSOCUG00000010138	POLR1A	100	91.110	Oryctolagus_cuniculus
ENSMFAG00000046097	POLR1A	100	65.298	ENSORLG00000008753	polr1a	99	65.046	Oryzias_latipes
ENSMFAG00000046097	POLR1A	100	64.062	ENSORLG00020020726	polr1a	99	63.463	Oryzias_latipes_hni
ENSMFAG00000046097	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSMFAG00000046097	POLR1A	100	91.453	ENSOGAG00000004031	POLR1A	100	91.453	Otolemur_garnettii
ENSMFAG00000046097	POLR1A	100	89.785	ENSOARG00000020601	POLR1A	100	89.919	Ovis_aries
ENSMFAG00000046097	POLR1A	100	97.500	ENSPPAG00000042450	POLR1A	100	97.500	Pan_paniscus
ENSMFAG00000046097	POLR1A	100	92.151	ENSPPRG00000006702	POLR1A	100	91.802	Panthera_pardus
ENSMFAG00000046097	POLR1A	100	91.599	ENSPTIG00000018783	POLR1A	100	91.251	Panthera_tigris_altaica
ENSMFAG00000046097	POLR1A	100	97.326	ENSPTRG00000012147	POLR1A	100	97.326	Pan_troglodytes
ENSMFAG00000046097	POLR1A	100	99.593	ENSPANG00000025908	POLR1A	100	99.593	Papio_anubis
ENSMFAG00000046097	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSMFAG00000046097	POLR1A	63	71.468	ENSPSIG00000009321	-	99	71.101	Pelodiscus_sinensis
ENSMFAG00000046097	POLR1A	54	68.449	ENSPMGG00000009718	polr1a	95	68.449	Periophthalmus_magnuspinnatus
ENSMFAG00000046097	POLR1A	100	87.970	ENSPEMG00000022224	Polr1a	100	88.130	Peromyscus_maniculatus_bairdii
ENSMFAG00000046097	POLR1A	95	79.526	ENSPCIG00000004222	POLR1A	99	78.784	Phascolarctos_cinereus
ENSMFAG00000046097	POLR1A	100	65.585	ENSPFOG00000005025	polr1a	100	65.122	Poecilia_formosa
ENSMFAG00000046097	POLR1A	100	65.759	ENSPLAG00000021389	polr1a	100	65.295	Poecilia_latipinna
ENSMFAG00000046097	POLR1A	100	63.847	ENSPMEG00000006463	polr1a	100	63.694	Poecilia_mexicana
ENSMFAG00000046097	POLR1A	100	65.527	ENSPREG00000002389	polr1a	100	65.084	Poecilia_reticulata
ENSMFAG00000046097	POLR1A	100	97.093	ENSPPYG00000012217	POLR1A	100	97.093	Pongo_abelii
ENSMFAG00000046097	POLR1A	88	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSMFAG00000046097	POLR1A	100	92.504	ENSPCOG00000026987	POLR1A	100	92.388	Propithecus_coquereli
ENSMFAG00000046097	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSMFAG00000046097	POLR1A	100	65.875	ENSPNYG00000000026	polr1a	100	65.394	Pundamilia_nyererei
ENSMFAG00000046097	POLR1A	100	67.226	ENSPNAG00000019223	polr1a	99	67.962	Pygocentrus_nattereri
ENSMFAG00000046097	POLR1A	100	87.840	ENSRNOG00000009545	Polr1a	100	87.724	Rattus_norvegicus
ENSMFAG00000046097	POLR1A	100	98.663	ENSRBIG00000028335	POLR1A	100	98.663	Rhinopithecus_bieti
ENSMFAG00000046097	POLR1A	100	98.605	ENSRROG00000031473	POLR1A	100	98.605	Rhinopithecus_roxellana
ENSMFAG00000046097	POLR1A	99	37.025	YOR341W	RPA190	99	36.989	Saccharomyces_cerevisiae
ENSMFAG00000046097	POLR1A	100	94.651	ENSSBOG00000030262	POLR1A	100	94.651	Saimiri_boliviensis_boliviensis
ENSMFAG00000046097	POLR1A	100	74.006	ENSSHAG00000014739	POLR1A	100	72.842	Sarcophilus_harrisii
ENSMFAG00000046097	POLR1A	100	67.805	ENSSFOG00015019716	polr1a	100	67.478	Scleropages_formosus
ENSMFAG00000046097	POLR1A	100	66.377	ENSSMAG00000014342	polr1a	100	65.895	Scophthalmus_maximus
ENSMFAG00000046097	POLR1A	100	66.264	ENSSDUG00000014631	polr1a	100	66.358	Seriola_dumerili
ENSMFAG00000046097	POLR1A	100	64.269	ENSSLDG00000024095	polr1a	100	64.406	Seriola_lalandi_dorsalis
ENSMFAG00000046097	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSMFAG00000046097	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSMFAG00000046097	POLR1A	63	72.222	ENSSPAG00000016341	polr1a	94	72.222	Stegastes_partitus
ENSMFAG00000046097	POLR1A	83	91.661	ENSSSCG00000008226	POLR1A	99	91.637	Sus_scrofa
ENSMFAG00000046097	POLR1A	99	70.294	ENSTGUG00000010704	POLR1A	100	70.059	Taeniopygia_guttata
ENSMFAG00000046097	POLR1A	100	64.055	ENSTRUG00000002210	polr1a	99	63.736	Takifugu_rubripes
ENSMFAG00000046097	POLR1A	100	60.495	ENSTNIG00000010116	polr1a	100	60.472	Tetraodon_nigroviridis
ENSMFAG00000046097	POLR1A	74	97.345	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSMFAG00000046097	POLR1A	100	86.628	ENSTTRG00000008597	POLR1A	100	86.221	Tursiops_truncatus
ENSMFAG00000046097	POLR1A	69	91.716	ENSUAMG00000012158	-	94	91.124	Ursus_americanus
ENSMFAG00000046097	POLR1A	100	90.756	ENSUMAG00000006700	POLR1A	100	90.349	Ursus_maritimus
ENSMFAG00000046097	POLR1A	100	90.830	ENSVVUG00000001245	POLR1A	100	90.703	Vulpes_vulpes
ENSMFAG00000046097	POLR1A	100	67.919	ENSXETG00000001952	polr1a	100	69.328	Xenopus_tropicalis
ENSMFAG00000046097	POLR1A	100	65.509	ENSXMAG00000004032	polr1a	100	65.240	Xiphophorus_maculatus