EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMFAG00000046182 (Gene tree)
Gene ID: 102143906
Gene Symbol: TRIM39
Alias: RNF23
Full Name: ribonuclease P/MRP subunit p21
Gene Type: protein_coding
Species: Macaca_fascicularis
Status: putative
Strand: Minus strand
Length: 19573 bases
Position: chr4:140592967-140612539
Accession: 102140893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMFAP00000040102	Rpr2	PF04032.16	6.8e-17	1	1
ENSMFAP00000040087	Rpr2	PF04032.16	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMFAT00000014398	TRIM39-203	3601	XM_015448860	ENSMFAP00000040131	488 (aa)	XP_015304346	A0A2K5WSG2
ENSMFAT00000014367	TRIM39-202	534	XM_005553651	ENSMFAP00000040102	177 (aa)	XP_005553708	A0A2K5WSI8
ENSMFAT00000014409	TRIM39-204	1557	-	ENSMFAP00000040142	518 (aa)	-	A0A2K5WSH5
ENSMFAT00000014352	TRIM39-201	1512	-	ENSMFAP00000040087	503 (aa)	-	A0A2K5WSH4

Gene Model

Click here to download ENSMFAG00000046182's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcf03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMFAG00000046182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMFAG00000046182	TRIM39	100	98.608	ENSANAG00000032075	TRIM39	100	98.608	Aotus_nancymaae
ENSMFAG00000046182	TRIM39	100	98.012	ENSCJAG00000020681	TRIM39	100	98.012	Callithrix_jacchus
ENSMFAG00000046182	TRIM39	100	98.410	ENSCCAG00000036784	TRIM39	100	98.410	Cebus_capucinus
ENSMFAG00000046182	TRIM39	100	99.801	ENSCATG00000044044	TRIM39	100	99.801	Cercocebus_atys
ENSMFAG00000046182	TRIM39	100	98.807	ENSGGOG00000016403	TRIM39	100	98.807	Gorilla_gorilla
ENSMFAG00000046182	TRIM39	100	100.000	ENSMMUG00000011682	RPP21	100	100.000	Macaca_mulatta
ENSMFAG00000046182	TRIM39	100	100.000	ENSMNEG00000034999	TRIM39	100	100.000	Macaca_nemestrina
ENSMFAG00000046182	TRIM39	100	100.000	ENSMLEG00000034263	TRIM39	100	100.000	Mandrillus_leucophaeus
ENSMFAG00000046182	TRIM39	100	98.807	ENSNLEG00000005026	TRIM39	100	98.807	Nomascus_leucogenys
ENSMFAG00000046182	TRIM39	100	99.006	ENSPPAG00000040674	TRIM39	100	99.006	Pan_paniscus
ENSMFAG00000046182	TRIM39	100	99.006	ENSPTRG00000017923	TRIM39	100	99.006	Pan_troglodytes
ENSMFAG00000046182	TRIM39	100	99.801	ENSPANG00000000655	TRIM39	100	99.801	Papio_anubis
ENSMFAG00000046182	TRIM39	100	99.801	ENSRBIG00000040889	TRIM39	100	99.801	Rhinopithecus_bieti
ENSMFAG00000046182	TRIM39	100	99.801	ENSRROG00000036496	TRIM39	100	99.801	Rhinopithecus_roxellana