EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000000653 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 7818 bases
Position: chr27:166599-174416
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000000027	RRM_1	PF00076.22	1.6e-39	1	2
ENSMGAP00000000027	RRM_1	PF00076.22	1.6e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000000655	SF3B4-201	1251	-	ENSMGAP00000000027	416 (aa)	-	G1MPS0

Gene Model

Click here to download ENSMGAG00000000653's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000000653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000000653	SF3B4	69	40.310	ENSMGAG00000012239	PABPC1	54	40.310
ENSMGAG00000000653	SF3B4	57	36.508	ENSMGAG00000003674	PABPC1L	58	36.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000000653	SF3B4	91	88.083	ENSG00000143368	SF3B4	90	100.000	Homo_sapiens
ENSMGAG00000000653	SF3B4	55	98.690	ENSAPOG00000017647	sf3b4	54	100.000	Acanthochromis_polyacanthus
ENSMGAG00000000653	SF3B4	91	89.556	ENSAMEG00000010073	SF3B4	99	87.943	Ailuropoda_melanoleuca
ENSMGAG00000000653	SF3B4	56	96.537	ENSACIG00000018455	sf3b4	63	99.065	Amphilophus_citrinellus
ENSMGAG00000000653	SF3B4	55	99.119	ENSAOCG00000019801	sf3b4	54	100.000	Amphiprion_ocellaris
ENSMGAG00000000653	SF3B4	55	99.119	ENSAPEG00000010365	sf3b4	54	100.000	Amphiprion_percula
ENSMGAG00000000653	SF3B4	55	98.690	ENSATEG00000012844	sf3b4	53	100.000	Anabas_testudineus
ENSMGAG00000000653	SF3B4	100	91.127	ENSACAG00000010019	SF3B4	99	91.607	Anolis_carolinensis
ENSMGAG00000000653	SF3B4	91	88.083	ENSANAG00000031025	SF3B4	99	87.707	Aotus_nancymaae
ENSMGAG00000000653	SF3B4	57	95.781	ENSACLG00000014260	sf3b4	53	100.000	Astatotilapia_calliptera
ENSMGAG00000000653	SF3B4	55	98.253	ENSAMXG00000008282	sf3b4	53	100.000	Astyanax_mexicanus
ENSMGAG00000000653	SF3B4	91	89.556	ENSBTAG00000012495	SF3B4	99	87.943	Bos_taurus
ENSMGAG00000000653	SF3B4	84	87.395	ENSBTAG00000012793	-	53	94.931	Bos_taurus
ENSMGAG00000000653	SF3B4	52	81.395	WBGene00004723	sap-49	55	81.308	Caenorhabditis_elegans
ENSMGAG00000000653	SF3B4	90	70.787	ENSCJAG00000042351	SF3B4	99	70.787	Callithrix_jacchus
ENSMGAG00000000653	SF3B4	91	89.034	ENSCAFG00000011617	SF3B4	99	87.470	Canis_familiaris
ENSMGAG00000000653	SF3B4	91	89.034	ENSCAFG00020019775	SF3B4	99	87.470	Canis_lupus_dingo
ENSMGAG00000000653	SF3B4	91	89.556	ENSCHIG00000025663	-	99	87.943	Capra_hircus
ENSMGAG00000000653	SF3B4	96	57.248	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSMGAG00000000653	SF3B4	91	88.083	ENSTSYG00000009295	SF3B4	99	87.707	Carlito_syrichta
ENSMGAG00000000653	SF3B4	89	76.471	ENSCAPG00000006451	SF3B4	78	100.000	Cavia_aperea
ENSMGAG00000000653	SF3B4	91	89.295	ENSCPOG00000008267	SF3B4	99	87.707	Cavia_porcellus
ENSMGAG00000000653	SF3B4	74	80.511	ENSCCAG00000019823	-	95	71.358	Cebus_capucinus
ENSMGAG00000000653	SF3B4	94	79.720	ENSCCAG00000021751	-	99	78.681	Cebus_capucinus
ENSMGAG00000000653	SF3B4	91	88.083	ENSCATG00000033114	SF3B4	99	87.707	Cercocebus_atys
ENSMGAG00000000653	SF3B4	91	89.295	ENSCLAG00000015851	SF3B4	99	87.707	Chinchilla_lanigera
ENSMGAG00000000653	SF3B4	91	88.083	ENSCSAG00000018129	SF3B4	99	87.707	Chlorocebus_sabaeus
ENSMGAG00000000653	SF3B4	100	96.659	ENSCPBG00000008041	SF3B4	100	96.659	Chrysemys_picta_bellii
ENSMGAG00000000653	SF3B4	55	87.665	ENSCING00000002337	-	57	90.654	Ciona_intestinalis
ENSMGAG00000000653	SF3B4	50	91.429	ENSCSAVG00000007809	-	89	89.881	Ciona_savignyi
ENSMGAG00000000653	SF3B4	91	88.083	ENSCANG00000035579	SF3B4	99	87.707	Colobus_angolensis_palliatus
ENSMGAG00000000653	SF3B4	91	87.990	ENSCGRG00001003590	Sf3b4	99	87.943	Cricetulus_griseus_chok1gshd
ENSMGAG00000000653	SF3B4	91	87.990	ENSCGRG00000016914	Sf3b4	99	87.943	Cricetulus_griseus_crigri
ENSMGAG00000000653	SF3B4	64	88.889	ENSCVAG00000005536	sf3b4	55	100.000	Cyprinodon_variegatus
ENSMGAG00000000653	SF3B4	55	98.696	ENSDARG00000018574	sf3b4	54	100.000	Danio_rerio
ENSMGAG00000000653	SF3B4	89	86.133	ENSDNOG00000048908	-	99	84.096	Dasypus_novemcinctus
ENSMGAG00000000653	SF3B4	97	70.433	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSMGAG00000000653	SF3B4	91	89.556	ENSDORG00000016366	Sf3b4	99	87.943	Dipodomys_ordii
ENSMGAG00000000653	SF3B4	53	86.425	FBgn0015818	Spx	62	88.318	Drosophila_melanogaster
ENSMGAG00000000653	SF3B4	75	81.875	ENSETEG00000008963	SF3B4	99	78.960	Echinops_telfairi
ENSMGAG00000000653	SF3B4	91	89.556	ENSEASG00005001477	SF3B4	99	87.943	Equus_asinus_asinus
ENSMGAG00000000653	SF3B4	91	89.556	ENSECAG00000024737	SF3B4	99	87.943	Equus_caballus
ENSMGAG00000000653	SF3B4	55	99.127	ENSELUG00000012876	sf3b4	53	100.000	Esox_lucius
ENSMGAG00000000653	SF3B4	91	89.556	ENSFCAG00000010106	SF3B4	99	87.943	Felis_catus
ENSMGAG00000000653	SF3B4	91	89.295	ENSFDAG00000009286	SF3B4	99	87.707	Fukomys_damarensis
ENSMGAG00000000653	SF3B4	55	97.380	ENSGMOG00000002519	sf3b4	79	99.533	Gadus_morhua
ENSMGAG00000000653	SF3B4	100	99.043	ENSGALG00000013352	SF3B4	100	99.043	Gallus_gallus
ENSMGAG00000000653	SF3B4	64	93.962	ENSGAFG00000010181	sf3b4	54	100.000	Gambusia_affinis
ENSMGAG00000000653	SF3B4	55	99.119	ENSGACG00000003819	sf3b4	54	100.000	Gasterosteus_aculeatus
ENSMGAG00000000653	SF3B4	100	96.420	ENSGAGG00000025055	SF3B4	88	96.420	Gopherus_agassizii
ENSMGAG00000000653	SF3B4	91	88.083	ENSGGOG00000004761	SF3B4	99	87.707	Gorilla_gorilla
ENSMGAG00000000653	SF3B4	100	65.877	ENSGGOG00000038845	-	55	88.318	Gorilla_gorilla
ENSMGAG00000000653	SF3B4	57	95.781	ENSHBUG00000002028	sf3b4	53	100.000	Haplochromis_burtoni
ENSMGAG00000000653	SF3B4	91	89.295	ENSHGLG00000012360	SF3B4	99	87.707	Heterocephalus_glaber_female
ENSMGAG00000000653	SF3B4	91	85.000	ENSHGLG00100008533	SF3B4	58	96.708	Heterocephalus_glaber_male
ENSMGAG00000000653	SF3B4	51	99.531	ENSHCOG00000003014	sf3b4	54	99.533	Hippocampus_comes
ENSMGAG00000000653	SF3B4	55	98.696	ENSIPUG00000012242	Sf3b4	54	100.000	Ictalurus_punctatus
ENSMGAG00000000653	SF3B4	91	89.556	ENSSTOG00000000684	-	99	87.943	Ictidomys_tridecemlineatus
ENSMGAG00000000653	SF3B4	75	66.667	ENSJJAG00000022500	Sf3b4	94	67.686	Jaculus_jaculus
ENSMGAG00000000653	SF3B4	57	96.624	ENSKMAG00000008154	sf3b4	54	100.000	Kryptolebias_marmoratus
ENSMGAG00000000653	SF3B4	56	98.283	ENSLBEG00000026818	sf3b4	54	100.000	Labrus_bergylta
ENSMGAG00000000653	SF3B4	58	96.708	ENSLACG00000004436	SF3B4	67	96.708	Latimeria_chalumnae
ENSMGAG00000000653	SF3B4	58	97.531	ENSLOCG00000009048	sf3b4	58	97.531	Lepisosteus_oculatus
ENSMGAG00000000653	SF3B4	91	90.104	ENSLAFG00000008531	SF3B4	99	87.028	Loxodonta_africana
ENSMGAG00000000653	SF3B4	91	67.546	ENSMFAG00000039067	-	53	80.000	Macaca_fascicularis
ENSMGAG00000000653	SF3B4	91	88.083	ENSMFAG00000042395	SF3B4	99	87.707	Macaca_fascicularis
ENSMGAG00000000653	SF3B4	91	88.083	ENSMMUG00000007256	SF3B4	99	87.707	Macaca_mulatta
ENSMGAG00000000653	SF3B4	91	88.083	ENSMNEG00000031839	SF3B4	99	87.707	Macaca_nemestrina
ENSMGAG00000000653	SF3B4	91	67.018	ENSMNEG00000031526	-	53	79.500	Macaca_nemestrina
ENSMGAG00000000653	SF3B4	91	88.083	ENSMLEG00000038667	SF3B4	99	87.707	Mandrillus_leucophaeus
ENSMGAG00000000653	SF3B4	57	96.203	ENSMAMG00000014692	sf3b4	54	100.000	Mastacembelus_armatus
ENSMGAG00000000653	SF3B4	57	95.781	ENSMZEG00005026741	sf3b4	53	100.000	Maylandia_zebra
ENSMGAG00000000653	SF3B4	91	87.990	ENSMAUG00000015266	Sf3b4	99	87.943	Mesocricetus_auratus
ENSMGAG00000000653	SF3B4	91	89.556	ENSMICG00000044961	SF3B4	99	87.943	Microcebus_murinus
ENSMGAG00000000653	SF3B4	91	89.556	ENSMOCG00000013658	-	99	87.943	Microtus_ochrogaster
ENSMGAG00000000653	SF3B4	92	77.320	ENSMOCG00000014155	-	99	77.458	Microtus_ochrogaster
ENSMGAG00000000653	SF3B4	91	88.083	ENSMODG00000018767	SF3B4	99	88.416	Monodelphis_domestica
ENSMGAG00000000653	SF3B4	55	98.678	ENSMALG00000006174	sf3b4	53	100.000	Monopterus_albus
ENSMGAG00000000653	SF3B4	91	87.467	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.708	Mus_caroli
ENSMGAG00000000653	SF3B4	91	87.990	ENSMUSG00000068856	Sf3b4	99	87.943	Mus_musculus
ENSMGAG00000000653	SF3B4	91	87.990	MGP_PahariEiJ_G0026809	Sf3b4	99	87.943	Mus_pahari
ENSMGAG00000000653	SF3B4	91	87.990	MGP_SPRETEiJ_G0026309	Sf3b4	99	87.943	Mus_spretus
ENSMGAG00000000653	SF3B4	91	89.556	ENSMPUG00000005563	SF3B4	99	87.943	Mustela_putorius_furo
ENSMGAG00000000653	SF3B4	91	89.556	ENSMLUG00000010789	SF3B4	99	87.943	Myotis_lucifugus
ENSMGAG00000000653	SF3B4	91	89.034	ENSNGAG00000016337	Sf3b4	99	87.234	Nannospalax_galili
ENSMGAG00000000653	SF3B4	57	96.203	ENSNBRG00000013865	sf3b4	53	100.000	Neolamprologus_brichardi
ENSMGAG00000000653	SF3B4	100	68.646	ENSNLEG00000000537	-	95	72.872	Nomascus_leucogenys
ENSMGAG00000000653	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSMGAG00000000653	SF3B4	55	93.860	ENSOPRG00000010808	SF3B4	50	95.327	Ochotona_princeps
ENSMGAG00000000653	SF3B4	91	63.802	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSMGAG00000000653	SF3B4	75	77.918	ENSODEG00000003597	-	65	81.439	Octodon_degus
ENSMGAG00000000653	SF3B4	57	96.203	ENSONIG00000002730	sf3b4	53	100.000	Oreochromis_niloticus
ENSMGAG00000000653	SF3B4	91	89.556	ENSOCUG00000004614	SF3B4	99	87.943	Oryctolagus_cuniculus
ENSMGAG00000000653	SF3B4	56	97.845	ENSORLG00000003062	sf3b4	55	100.000	Oryzias_latipes
ENSMGAG00000000653	SF3B4	56	97.845	ENSORLG00020000687	sf3b4	54	100.000	Oryzias_latipes_hni
ENSMGAG00000000653	SF3B4	56	97.845	ENSORLG00015010989	sf3b4	54	100.000	Oryzias_latipes_hsok
ENSMGAG00000000653	SF3B4	56	97.845	ENSOMEG00000013694	sf3b4	54	100.000	Oryzias_melastigma
ENSMGAG00000000653	SF3B4	91	89.556	ENSOGAG00000006265	SF3B4	99	87.943	Otolemur_garnettii
ENSMGAG00000000653	SF3B4	91	89.556	ENSOARG00000020718	-	99	87.943	Ovis_aries
ENSMGAG00000000653	SF3B4	86	68.871	ENSOARG00000007368	-	51	83.333	Ovis_aries
ENSMGAG00000000653	SF3B4	91	88.083	ENSPPAG00000040904	SF3B4	99	87.707	Pan_paniscus
ENSMGAG00000000653	SF3B4	91	89.556	ENSPPRG00000007384	SF3B4	99	87.943	Panthera_pardus
ENSMGAG00000000653	SF3B4	91	89.556	ENSPTIG00000014530	SF3B4	99	87.707	Panthera_tigris_altaica
ENSMGAG00000000653	SF3B4	100	71.564	ENSPTRG00000049727	-	60	87.029	Pan_troglodytes
ENSMGAG00000000653	SF3B4	91	88.083	ENSPTRG00000001243	SF3B4	99	87.707	Pan_troglodytes
ENSMGAG00000000653	SF3B4	91	88.083	ENSPANG00000005126	SF3B4	99	87.707	Papio_anubis
ENSMGAG00000000653	SF3B4	56	98.276	ENSPKIG00000020669	sf3b4	57	100.000	Paramormyrops_kingsleyae
ENSMGAG00000000653	SF3B4	66	79.927	ENSPSIG00000009565	SF3B4	63	100.000	Pelodiscus_sinensis
ENSMGAG00000000653	SF3B4	91	87.990	ENSPEMG00000017568	Sf3b4	99	87.943	Peromyscus_maniculatus_bairdii
ENSMGAG00000000653	SF3B4	62	87.160	ENSPMAG00000007842	-	50	95.327	Petromyzon_marinus
ENSMGAG00000000653	SF3B4	91	88.083	ENSPCIG00000008765	SF3B4	99	88.416	Phascolarctos_cinereus
ENSMGAG00000000653	SF3B4	65	92.222	ENSPFOG00000005754	sf3b4	54	100.000	Poecilia_formosa
ENSMGAG00000000653	SF3B4	65	92.222	ENSPLAG00000001401	sf3b4	59	100.000	Poecilia_latipinna
ENSMGAG00000000653	SF3B4	67	91.367	ENSPREG00000011076	sf3b4	53	100.000	Poecilia_reticulata
ENSMGAG00000000653	SF3B4	50	96.635	ENSPCAG00000000392	SF3B4	62	96.635	Procavia_capensis
ENSMGAG00000000653	SF3B4	91	89.556	ENSPCOG00000015399	SF3B4	99	87.943	Propithecus_coquereli
ENSMGAG00000000653	SF3B4	91	89.556	ENSPVAG00000014171	SF3B4	99	87.943	Pteropus_vampyrus
ENSMGAG00000000653	SF3B4	57	95.781	ENSPNYG00000012700	sf3b4	53	100.000	Pundamilia_nyererei
ENSMGAG00000000653	SF3B4	55	98.690	ENSPNAG00000000686	sf3b4	55	100.000	Pygocentrus_nattereri
ENSMGAG00000000653	SF3B4	91	87.990	ENSRNOG00000021181	Sf3b4	99	87.943	Rattus_norvegicus
ENSMGAG00000000653	SF3B4	91	88.083	ENSRBIG00000043392	SF3B4	99	87.707	Rhinopithecus_bieti
ENSMGAG00000000653	SF3B4	91	88.083	ENSRROG00000029366	SF3B4	99	87.707	Rhinopithecus_roxellana
ENSMGAG00000000653	SF3B4	91	87.824	ENSSBOG00000012310	-	99	87.470	Saimiri_boliviensis_boliviensis
ENSMGAG00000000653	SF3B4	91	85.233	ENSSHAG00000004043	SF3B4	99	86.842	Sarcophilus_harrisii
ENSMGAG00000000653	SF3B4	57	97.468	ENSSFOG00015008864	sf3b4	53	100.000	Scleropages_formosus
ENSMGAG00000000653	SF3B4	54	99.115	ENSSMAG00000006837	sf3b4	54	100.000	Scophthalmus_maximus
ENSMGAG00000000653	SF3B4	55	98.261	ENSSDUG00000012064	sf3b4	53	100.000	Seriola_dumerili
ENSMGAG00000000653	SF3B4	55	98.696	ENSSLDG00000014226	sf3b4	53	100.000	Seriola_lalandi_dorsalis
ENSMGAG00000000653	SF3B4	55	98.696	ENSSPAG00000019219	sf3b4	53	100.000	Stegastes_partitus
ENSMGAG00000000653	SF3B4	86	57.703	ENSSSCG00000039440	-	51	64.953	Sus_scrofa
ENSMGAG00000000653	SF3B4	91	90.339	ENSSSCG00000006665	-	99	87.234	Sus_scrofa
ENSMGAG00000000653	SF3B4	61	96.063	ENSTGUG00000004470	SF3B4	100	96.063	Taeniopygia_guttata
ENSMGAG00000000653	SF3B4	55	97.797	ENSTRUG00000004516	sf3b4	54	100.000	Takifugu_rubripes
ENSMGAG00000000653	SF3B4	55	98.253	ENSTNIG00000009156	sf3b4	55	100.000	Tetraodon_nigroviridis
ENSMGAG00000000653	SF3B4	91	89.556	ENSTTRG00000005217	SF3B4	99	87.943	Tursiops_truncatus
ENSMGAG00000000653	SF3B4	91	89.556	ENSUAMG00000022468	SF3B4	99	87.943	Ursus_americanus
ENSMGAG00000000653	SF3B4	93	87.563	ENSUMAG00000003802	SF3B4	99	87.441	Ursus_maritimus
ENSMGAG00000000653	SF3B4	88	89.218	ENSVPAG00000008152	SF3B4	99	87.591	Vicugna_pacos
ENSMGAG00000000653	SF3B4	62	93.023	ENSVVUG00000022697	-	54	93.023	Vulpes_vulpes
ENSMGAG00000000653	SF3B4	75	88.715	ENSVVUG00000007732	-	96	81.886	Vulpes_vulpes
ENSMGAG00000000653	SF3B4	55	98.690	ENSXCOG00000019895	sf3b4	55	100.000	Xiphophorus_couchianus
ENSMGAG00000000653	SF3B4	55	98.690	ENSXMAG00000003772	sf3b4	55	100.000	Xiphophorus_maculatus