EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000000750 (Gene tree)
Gene ID: 100550366
Gene Symbol: LSM7
Alias: YNL147W
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 5403 bases
Position: chr30:99204-104606
Accession: 20470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000000125	LSM	PF01423.22	3.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000000757	LSM7-201	1285	-	ENSMGAP00000000125	116 (aa)	-	G1MQ02

Gene Model

Click here to download ENSMGAG00000000750's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03018	RNA degradation	KEGG
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000000750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000000750	LSM7	64	35.526	ENSMGAG00000008808	LSM8	73	35.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000000750	LSM7	89	98.058	ENSG00000130332	LSM7	100	98.058	Homo_sapiens
ENSMGAG00000000750	LSM7	81	96.809	ENSAPOG00000015573	lsm7	81	96.809	Acanthochromis_polyacanthus
ENSMGAG00000000750	LSM7	89	95.146	ENSAMEG00000005484	LSM7	100	95.146	Ailuropoda_melanoleuca
ENSMGAG00000000750	LSM7	84	95.918	ENSACIG00000006498	lsm7	78	95.918	Amphilophus_citrinellus
ENSMGAG00000000750	LSM7	87	97.030	ENSAOCG00000001077	lsm7	92	97.030	Amphiprion_ocellaris
ENSMGAG00000000750	LSM7	89	95.146	ENSAPEG00000024447	lsm7	92	97.030	Amphiprion_percula
ENSMGAG00000000750	LSM7	89	97.087	ENSAPEG00000000694	lsm7	100	97.087	Amphiprion_percula
ENSMGAG00000000750	LSM7	89	97.087	ENSATEG00000008557	lsm7	100	97.087	Anabas_testudineus
ENSMGAG00000000750	LSM7	89	89.320	ENSANAG00000022222	-	100	89.320	Aotus_nancymaae
ENSMGAG00000000750	LSM7	89	98.058	ENSANAG00000037196	-	100	98.058	Aotus_nancymaae
ENSMGAG00000000750	LSM7	89	96.117	ENSACLG00000021021	lsm7	100	96.117	Astatotilapia_calliptera
ENSMGAG00000000750	LSM7	89	97.087	ENSAMXG00000037622	lsm7	100	97.087	Astyanax_mexicanus
ENSMGAG00000000750	LSM7	89	98.058	ENSBTAG00000004521	LSM7	100	98.058	Bos_taurus
ENSMGAG00000000750	LSM7	86	58.000	WBGene00003081	lsm-7	88	57.609	Caenorhabditis_elegans
ENSMGAG00000000750	LSM7	87	97.030	ENSCAFG00000019409	LSM7	98	97.030	Canis_familiaris
ENSMGAG00000000750	LSM7	98	86.441	ENSCAFG00020018168	LSM7	74	98.000	Canis_lupus_dingo
ENSMGAG00000000750	LSM7	89	96.117	ENSCHIG00000023663	LSM7	100	96.117	Capra_hircus
ENSMGAG00000000750	LSM7	61	97.183	ENSCAPG00000014534	LSM7	100	97.183	Cavia_aperea
ENSMGAG00000000750	LSM7	89	98.058	ENSCPOG00000014025	LSM7	100	98.058	Cavia_porcellus
ENSMGAG00000000750	LSM7	87	98.020	ENSCCAG00000035456	LSM7	99	98.020	Cebus_capucinus
ENSMGAG00000000750	LSM7	89	98.058	ENSCATG00000023543	LSM7	100	98.058	Cercocebus_atys
ENSMGAG00000000750	LSM7	89	98.058	ENSCLAG00000011635	LSM7	100	98.058	Chinchilla_lanigera
ENSMGAG00000000750	LSM7	89	98.058	ENSCSAG00000011599	LSM7	100	98.058	Chlorocebus_sabaeus
ENSMGAG00000000750	LSM7	62	97.222	ENSCPBG00000021317	LSM7	77	97.222	Chrysemys_picta_bellii
ENSMGAG00000000750	LSM7	83	81.250	ENSCING00000022134	-	91	82.222	Ciona_intestinalis
ENSMGAG00000000750	LSM7	89	98.058	ENSCANG00000035525	LSM7	100	98.058	Colobus_angolensis_palliatus
ENSMGAG00000000750	LSM7	78	87.778	ENSCGRG00001016005	-	92	87.778	Cricetulus_griseus_chok1gshd
ENSMGAG00000000750	LSM7	89	97.087	ENSCGRG00001000807	-	100	97.087	Cricetulus_griseus_chok1gshd
ENSMGAG00000000750	LSM7	87	97.030	ENSCGRG00000014355	-	97	97.030	Cricetulus_griseus_crigri
ENSMGAG00000000750	LSM7	78	87.778	ENSCGRG00000006821	-	92	87.778	Cricetulus_griseus_crigri
ENSMGAG00000000750	LSM7	92	93.458	ENSCSEG00000014900	lsm7	84	97.030	Cynoglossus_semilaevis
ENSMGAG00000000750	LSM7	91	95.238	ENSCVAG00000021091	lsm7	94	98.020	Cyprinodon_variegatus
ENSMGAG00000000750	LSM7	89	97.087	ENSDARG00000058328	lsm7	100	97.087	Danio_rerio
ENSMGAG00000000750	LSM7	88	96.078	ENSDORG00000024460	Lsm7	100	96.078	Dipodomys_ordii
ENSMGAG00000000750	LSM7	95	70.270	FBgn0261068	LSm7	83	75.824	Drosophila_melanogaster
ENSMGAG00000000750	LSM7	87	95.050	ENSETEG00000012788	LSM7	99	95.050	Echinops_telfairi
ENSMGAG00000000750	LSM7	89	84.466	ENSEBUG00000016992	lsm7	99	84.466	Eptatretus_burgeri
ENSMGAG00000000750	LSM7	72	60.241	ENSEBUG00000010470	-	79	60.241	Eptatretus_burgeri
ENSMGAG00000000750	LSM7	91	94.286	ENSECAG00000001440	LSM7	67	94.231	Equus_caballus
ENSMGAG00000000750	LSM7	89	97.087	ENSFCAG00000003445	LSM7	100	97.087	Felis_catus
ENSMGAG00000000750	LSM7	87	99.010	ENSFALG00000011912	LSM7	100	99.010	Ficedula_albicollis
ENSMGAG00000000750	LSM7	83	97.917	ENSFDAG00000007661	LSM7	100	97.917	Fukomys_damarensis
ENSMGAG00000000750	LSM7	79	97.826	ENSFHEG00000006349	lsm7	90	98.020	Fundulus_heteroclitus
ENSMGAG00000000750	LSM7	89	93.204	ENSGMOG00000013320	lsm7	100	93.204	Gadus_morhua
ENSMGAG00000000750	LSM7	89	98.058	ENSGAFG00000013902	lsm7	100	98.058	Gambusia_affinis
ENSMGAG00000000750	LSM7	89	94.175	ENSGACG00000010390	lsm7	100	94.175	Gasterosteus_aculeatus
ENSMGAG00000000750	LSM7	89	98.058	ENSGGOG00000010172	LSM7	100	98.058	Gorilla_gorilla
ENSMGAG00000000750	LSM7	89	96.117	ENSHBUG00000004616	lsm7	100	96.117	Haplochromis_burtoni
ENSMGAG00000000750	LSM7	89	98.058	ENSHGLG00000010587	LSM7	100	98.058	Heterocephalus_glaber_female
ENSMGAG00000000750	LSM7	89	98.058	ENSHGLG00100000852	LSM7	100	98.058	Heterocephalus_glaber_male
ENSMGAG00000000750	LSM7	87	96.040	ENSHCOG00000020252	lsm7	100	96.040	Hippocampus_comes
ENSMGAG00000000750	LSM7	89	97.087	ENSIPUG00000024724	lsm7	100	97.087	Ictalurus_punctatus
ENSMGAG00000000750	LSM7	87	98.020	ENSSTOG00000028372	LSM7	99	98.020	Ictidomys_tridecemlineatus
ENSMGAG00000000750	LSM7	86	98.000	ENSJJAG00000001936	Lsm7	97	98.000	Jaculus_jaculus
ENSMGAG00000000750	LSM7	89	98.058	ENSKMAG00000022151	lsm7	100	98.058	Kryptolebias_marmoratus
ENSMGAG00000000750	LSM7	89	96.117	ENSLBEG00000005203	lsm7	100	96.117	Labrus_bergylta
ENSMGAG00000000750	LSM7	89	97.087	ENSLACG00000015700	LSM7	100	97.087	Latimeria_chalumnae
ENSMGAG00000000750	LSM7	89	96.117	ENSLOCG00000004356	lsm7	100	96.117	Lepisosteus_oculatus
ENSMGAG00000000750	LSM7	87	98.020	ENSLAFG00000029302	LSM7	98	98.020	Loxodonta_africana
ENSMGAG00000000750	LSM7	89	98.058	ENSMFAG00000044572	LSM7	100	98.058	Macaca_fascicularis
ENSMGAG00000000750	LSM7	89	98.058	ENSMMUG00000000452	LSM7	100	98.058	Macaca_mulatta
ENSMGAG00000000750	LSM7	89	98.058	ENSMNEG00000004393	LSM7	100	98.058	Macaca_nemestrina
ENSMGAG00000000750	LSM7	89	98.058	ENSMLEG00000030852	LSM7	100	98.058	Mandrillus_leucophaeus
ENSMGAG00000000750	LSM7	89	96.117	ENSMAMG00000005410	lsm7	100	96.117	Mastacembelus_armatus
ENSMGAG00000000750	LSM7	89	96.117	ENSMZEG00005028055	lsm7	100	96.117	Maylandia_zebra
ENSMGAG00000000750	LSM7	89	97.087	ENSMAUG00000009276	Lsm7	100	97.087	Mesocricetus_auratus
ENSMGAG00000000750	LSM7	89	98.058	ENSMICG00000028619	-	100	98.058	Microcebus_murinus
ENSMGAG00000000750	LSM7	89	97.087	ENSMICG00000009988	-	100	97.087	Microcebus_murinus
ENSMGAG00000000750	LSM7	89	97.087	ENSMOCG00000016925	Lsm7	100	97.087	Microtus_ochrogaster
ENSMGAG00000000750	LSM7	89	97.087	ENSMMOG00000019645	lsm7	98	97.087	Mola_mola
ENSMGAG00000000750	LSM7	89	99.029	ENSMODG00000004722	LSM7	100	99.029	Monodelphis_domestica
ENSMGAG00000000750	LSM7	91	93.396	ENSMALG00000014511	lsm7	82	93.396	Monopterus_albus
ENSMGAG00000000750	LSM7	88	97.059	MGP_CAROLIEiJ_G0015607	Lsm7	99	97.059	Mus_caroli
ENSMGAG00000000750	LSM7	88	97.059	ENSMUSG00000035215	Lsm7	99	97.059	Mus_musculus
ENSMGAG00000000750	LSM7	88	97.059	MGP_PahariEiJ_G0031020	Lsm7	99	97.059	Mus_pahari
ENSMGAG00000000750	LSM7	88	97.059	MGP_SPRETEiJ_G0016425	Lsm7	99	97.059	Mus_spretus
ENSMGAG00000000750	LSM7	91	91.429	ENSMLUG00000024002	-	94	91.262	Myotis_lucifugus
ENSMGAG00000000750	LSM7	89	95.146	ENSMLUG00000013097	-	100	95.146	Myotis_lucifugus
ENSMGAG00000000750	LSM7	89	96.117	ENSNGAG00000021637	Lsm7	100	96.117	Nannospalax_galili
ENSMGAG00000000750	LSM7	91	92.453	ENSNBRG00000015770	lsm7	91	92.453	Neolamprologus_brichardi
ENSMGAG00000000750	LSM7	81	96.809	ENSNBRG00000001237	-	83	93.269	Neolamprologus_brichardi
ENSMGAG00000000750	LSM7	89	98.058	ENSNLEG00000002265	LSM7	100	98.058	Nomascus_leucogenys
ENSMGAG00000000750	LSM7	89	77.670	ENSODEG00000008190	-	100	77.670	Octodon_degus
ENSMGAG00000000750	LSM7	89	98.058	ENSODEG00000013590	-	100	98.058	Octodon_degus
ENSMGAG00000000750	LSM7	89	91.262	ENSODEG00000018769	-	100	91.262	Octodon_degus
ENSMGAG00000000750	LSM7	91	93.396	ENSONIG00000001801	lsm7	91	93.396	Oreochromis_niloticus
ENSMGAG00000000750	LSM7	89	97.087	ENSORLG00000023951	lsm7	100	97.087	Oryzias_latipes
ENSMGAG00000000750	LSM7	89	97.087	ENSORLG00020022226	lsm7	100	97.087	Oryzias_latipes_hni
ENSMGAG00000000750	LSM7	89	95.146	ENSORLG00015020044	lsm7	94	97.030	Oryzias_latipes_hsok
ENSMGAG00000000750	LSM7	89	97.087	ENSOMEG00000012806	lsm7	100	97.087	Oryzias_melastigma
ENSMGAG00000000750	LSM7	89	86.408	ENSOGAG00000024373	-	91	86.022	Otolemur_garnettii
ENSMGAG00000000750	LSM7	87	96.040	ENSOGAG00000000144	-	99	96.040	Otolemur_garnettii
ENSMGAG00000000750	LSM7	89	96.117	ENSOARG00000014013	LSM7	100	96.117	Ovis_aries
ENSMGAG00000000750	LSM7	89	98.058	ENSPPAG00000026500	LSM7	100	98.058	Pan_paniscus
ENSMGAG00000000750	LSM7	89	97.087	ENSPPRG00000008624	LSM7	100	97.087	Panthera_pardus
ENSMGAG00000000750	LSM7	87	97.030	ENSPTIG00000016252	LSM7	98	97.030	Panthera_tigris_altaica
ENSMGAG00000000750	LSM7	89	98.058	ENSPTRG00000010233	LSM7	100	98.058	Pan_troglodytes
ENSMGAG00000000750	LSM7	89	98.058	ENSPANG00000020668	LSM7	100	98.058	Papio_anubis
ENSMGAG00000000750	LSM7	89	99.029	ENSPKIG00000011325	lsm7	100	99.029	Paramormyrops_kingsleyae
ENSMGAG00000000750	LSM7	87	100.000	ENSPSIG00000017149	LSM7	89	100.000	Pelodiscus_sinensis
ENSMGAG00000000750	LSM7	89	97.087	ENSPMGG00000006498	lsm7	100	97.087	Periophthalmus_magnuspinnatus
ENSMGAG00000000750	LSM7	89	99.029	ENSPCIG00000030454	LSM7	100	99.029	Phascolarctos_cinereus
ENSMGAG00000000750	LSM7	89	95.146	ENSPFOG00000012467	lsm7	91	95.146	Poecilia_formosa
ENSMGAG00000000750	LSM7	91	94.286	ENSPLAG00000000252	lsm7	94	96.078	Poecilia_latipinna
ENSMGAG00000000750	LSM7	91	94.286	ENSPMEG00000000587	lsm7	94	96.078	Poecilia_mexicana
ENSMGAG00000000750	LSM7	69	77.778	ENSPREG00000016718	lsm7	65	77.778	Poecilia_reticulata
ENSMGAG00000000750	LSM7	63	95.890	ENSPPYG00000009348	-	50	95.890	Pongo_abelii
ENSMGAG00000000750	LSM7	89	98.058	ENSPCOG00000017177	LSM7	100	98.058	Propithecus_coquereli
ENSMGAG00000000750	LSM7	89	96.117	ENSPNYG00000006938	lsm7	100	96.117	Pundamilia_nyererei
ENSMGAG00000000750	LSM7	89	97.087	ENSPNAG00000010141	lsm7	100	97.087	Pygocentrus_nattereri
ENSMGAG00000000750	LSM7	88	98.039	ENSRNOG00000019552	Lsm7	99	98.039	Rattus_norvegicus
ENSMGAG00000000750	LSM7	89	98.058	ENSRBIG00000035978	LSM7	100	98.058	Rhinopithecus_bieti
ENSMGAG00000000750	LSM7	89	98.058	ENSRROG00000034044	LSM7	100	98.058	Rhinopithecus_roxellana
ENSMGAG00000000750	LSM7	74	49.438	YNL147W	-	75	48.837	Saccharomyces_cerevisiae
ENSMGAG00000000750	LSM7	89	98.058	ENSSBOG00000034899	LSM7	100	98.058	Saimiri_boliviensis_boliviensis
ENSMGAG00000000750	LSM7	89	97.087	ENSSFOG00015006728	lsm7	100	97.087	Scleropages_formosus
ENSMGAG00000000750	LSM7	92	93.458	ENSSMAG00000004195	lsm7	93	97.030	Scophthalmus_maximus
ENSMGAG00000000750	LSM7	89	97.087	ENSSDUG00000001863	lsm7	100	97.087	Seriola_dumerili
ENSMGAG00000000750	LSM7	89	97.087	ENSSLDG00000016339	lsm7	100	97.087	Seriola_lalandi_dorsalis
ENSMGAG00000000750	LSM7	92	94.393	ENSSPAG00000015221	lsm7	100	97.087	Stegastes_partitus
ENSMGAG00000000750	LSM7	87	98.020	ENSSSCG00000013463	LSM7	99	98.020	Sus_scrofa
ENSMGAG00000000750	LSM7	87	99.010	ENSTGUG00000000067	LSM7	100	99.010	Taeniopygia_guttata
ENSMGAG00000000750	LSM7	89	97.087	ENSTRUG00000022913	lsm7	100	97.087	Takifugu_rubripes
ENSMGAG00000000750	LSM7	89	97.087	ENSTNIG00000015525	lsm7	100	97.087	Tetraodon_nigroviridis
ENSMGAG00000000750	LSM7	60	84.286	ENSTBEG00000016602	LSM7	100	84.286	Tupaia_belangeri
ENSMGAG00000000750	LSM7	89	95.146	ENSUAMG00000000912	LSM7	86	95.146	Ursus_americanus
ENSMGAG00000000750	LSM7	92	93.458	ENSUMAG00000006556	LSM7	78	98.000	Ursus_maritimus
ENSMGAG00000000750	LSM7	61	95.775	ENSVVUG00000002640	LSM7	65	95.775	Vulpes_vulpes
ENSMGAG00000000750	LSM7	87	97.030	ENSXETG00000022166	lsm7	100	97.030	Xenopus_tropicalis
ENSMGAG00000000750	LSM7	88	97.059	ENSXCOG00000002572	lsm7	100	97.059	Xiphophorus_couchianus
ENSMGAG00000000750	LSM7	89	98.058	ENSXMAG00000018630	lsm7	100	98.058	Xiphophorus_maculatus