EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000000888 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 1512 bases
Position: chr22:54854-56365
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000000267	RRM_1	PF00076.22	5.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000000902	SRSF6-201	819	-	ENSMGAP00000000267	273 (aa)	-	G1MQC0

Gene Model

Click here to download ENSMGAG00000000888's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG
mgp05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000000888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000000888	SRSF6	84	93.939	ENSAPLG00000014472	SRSF6	74	94.828	Anas_platyrhynchos
ENSMGAG00000000888	SRSF6	84	87.826	ENSACAG00000002061	SRSF6	66	79.565	Anolis_carolinensis
ENSMGAG00000000888	SRSF6	82	84.000	ENSCPBG00000018200	SRSF6	66	87.391	Chrysemys_picta_bellii
ENSMGAG00000000888	SRSF6	82	79.018	ENSETEG00000006221	SRSF6	67	79.130	Echinops_telfairi
ENSMGAG00000000888	SRSF6	96	96.981	ENSFALG00000012776	SRSF6	100	96.981	Ficedula_albicollis
ENSMGAG00000000888	SRSF6	96	99.240	ENSGALG00000000990	SRSF6	75	99.240	Gallus_gallus
ENSMGAG00000000888	SRSF6	82	84.000	ENSGAGG00000003238	SRSF6	66	87.391	Gopherus_agassizii
ENSMGAG00000000888	SRSF6	52	65.248	ENSMODG00000003107	SRSF6	73	77.255	Monodelphis_domestica
ENSMGAG00000000888	SRSF6	91	84.739	ENSPCIG00000003820	SRSF6	73	76.863	Phascolarctos_cinereus
ENSMGAG00000000888	SRSF6	84	58.268	ENSSHAG00000012805	SRSF6	73	76.863	Sarcophilus_harrisii
ENSMGAG00000000888	SRSF6	82	94.714	ENSTGUG00000003455	SRSF6	67	95.690	Taeniopygia_guttata