EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000001004 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 33586 bases
Position: chr16:764137-797722
Accession: 100544728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000000453	R3H	PF01424.22	2.3e-07	1	1
ENSMGAP00000000453	RNA_bind	PF08675.11	1.3e-33	1	1
ENSMGAP00000000453	CAF1	PF04857.20	7.7e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000001093	PARN-201	2791	XM_010719707	ENSMGAP00000000453	636 (aa)	XP_010718009	G1MQS6

Gene Model

Click here to download ENSMGAG00000001004's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000001004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000001004	PARN	95	82.708	ENSG00000140694	PARN	94	100.000	Homo_sapiens
ENSMGAG00000001004	PARN	95	80.788	ENSAMEG00000011208	PARN	95	80.624	Ailuropoda_melanoleuca
ENSMGAG00000001004	PARN	84	72.862	ENSACIG00000000619	parn	83	72.862	Amphilophus_citrinellus
ENSMGAG00000001004	PARN	97	67.524	ENSAOCG00000003465	parn	86	69.916	Amphiprion_ocellaris
ENSMGAG00000001004	PARN	76	75.410	ENSAPEG00000010661	parn	93	75.410	Amphiprion_percula
ENSMGAG00000001004	PARN	90	72.870	ENSATEG00000004661	parn	82	72.870	Anabas_testudineus
ENSMGAG00000001004	PARN	96	93.464	ENSAPLG00000013914	PARN	96	93.464	Anas_platyrhynchos
ENSMGAG00000001004	PARN	89	84.683	ENSACAG00000004973	PARN	98	77.743	Anolis_carolinensis
ENSMGAG00000001004	PARN	95	82.219	ENSANAG00000031516	PARN	94	100.000	Aotus_nancymaae
ENSMGAG00000001004	PARN	90	72.396	ENSACLG00000004742	parn	83	72.396	Astatotilapia_calliptera
ENSMGAG00000001004	PARN	91	71.280	ENSAMXG00000012390	parn	93	70.069	Astyanax_mexicanus
ENSMGAG00000001004	PARN	95	78.560	ENSBTAG00000018097	PARN	100	80.690	Bos_taurus
ENSMGAG00000001004	PARN	95	82.708	ENSCJAG00000015866	PARN	94	100.000	Callithrix_jacchus
ENSMGAG00000001004	PARN	95	81.086	ENSCAFG00000018795	PARN	95	81.086	Canis_familiaris
ENSMGAG00000001004	PARN	95	80.921	ENSCAFG00020024126	PARN	95	80.921	Canis_lupus_dingo
ENSMGAG00000001004	PARN	95	81.250	ENSCHIG00000018143	PARN	95	81.250	Capra_hircus
ENSMGAG00000001004	PARN	70	59.565	ENSCAPG00000007984	PARN	74	59.565	Cavia_aperea
ENSMGAG00000001004	PARN	95	80.460	ENSCPOG00000002263	PARN	95	80.460	Cavia_porcellus
ENSMGAG00000001004	PARN	95	82.382	ENSCCAG00000030367	PARN	94	100.000	Cebus_capucinus
ENSMGAG00000001004	PARN	79	90.818	ENSCATG00000041368	PARN	93	100.000	Cercocebus_atys
ENSMGAG00000001004	PARN	98	80.000	ENSCLAG00000015406	PARN	97	80.000	Chinchilla_lanigera
ENSMGAG00000001004	PARN	95	82.871	ENSCSAG00000008142	PARN	95	82.871	Chlorocebus_sabaeus
ENSMGAG00000001004	PARN	98	64.103	ENSCHOG00000007014	PARN	96	65.625	Choloepus_hoffmanni
ENSMGAG00000001004	PARN	88	88.948	ENSCPBG00000006609	PARN	97	88.948	Chrysemys_picta_bellii
ENSMGAG00000001004	PARN	79	42.286	ENSCING00000010142	-	98	42.286	Ciona_intestinalis
ENSMGAG00000001004	PARN	68	100.000	ENSCANG00000028849	-	93	100.000	Colobus_angolensis_palliatus
ENSMGAG00000001004	PARN	95	78.489	ENSCGRG00001012096	Parn	95	78.489	Cricetulus_griseus_chok1gshd
ENSMGAG00000001004	PARN	95	78.489	ENSCGRG00000004939	Parn	95	78.489	Cricetulus_griseus_crigri
ENSMGAG00000001004	PARN	89	69.772	ENSCSEG00000002064	parn	81	69.772	Cynoglossus_semilaevis
ENSMGAG00000001004	PARN	96	67.480	ENSCVAG00000014848	parn	83	69.374	Cyprinodon_variegatus
ENSMGAG00000001004	PARN	90	68.229	ENSDARG00000102634	parn	87	68.229	Danio_rerio
ENSMGAG00000001004	PARN	95	82.895	ENSDNOG00000000833	PARN	93	88.994	Dasypus_novemcinctus
ENSMGAG00000001004	PARN	61	85.837	ENSETEG00000014828	-	68	78.161	Echinops_telfairi
ENSMGAG00000001004	PARN	55	54.775	ENSEBUG00000007052	PARN	100	53.371	Eptatretus_burgeri
ENSMGAG00000001004	PARN	95	82.072	ENSEASG00005011400	PARN	95	82.072	Equus_asinus_asinus
ENSMGAG00000001004	PARN	95	81.743	ENSECAG00000017792	PARN	95	81.743	Equus_caballus
ENSMGAG00000001004	PARN	81	74.346	ENSEEUG00000010370	PARN	82	74.346	Erinaceus_europaeus
ENSMGAG00000001004	PARN	98	66.297	ENSELUG00000013139	parn	77	68.386	Esox_lucius
ENSMGAG00000001004	PARN	95	82.401	ENSFCAG00000044961	PARN	94	96.552	Felis_catus
ENSMGAG00000001004	PARN	96	91.857	ENSFALG00000003911	PARN	95	91.857	Ficedula_albicollis
ENSMGAG00000001004	PARN	95	80.131	ENSFDAG00000009234	PARN	95	80.131	Fukomys_damarensis
ENSMGAG00000001004	PARN	91	64.837	ENSFHEG00000013738	parn	88	64.837	Fundulus_heteroclitus
ENSMGAG00000001004	PARN	83	74.715	ENSGMOG00000003231	parn	95	74.715	Gadus_morhua
ENSMGAG00000001004	PARN	96	97.545	ENSGALG00000003091	PARN	96	97.545	Gallus_gallus
ENSMGAG00000001004	PARN	89	71.529	ENSGAFG00000011061	parn	83	70.478	Gambusia_affinis
ENSMGAG00000001004	PARN	99	65.728	ENSGACG00000019501	parn	99	65.884	Gasterosteus_aculeatus
ENSMGAG00000001004	PARN	50	84.877	ENSGAGG00000023281	PARN	82	84.877	Gopherus_agassizii
ENSMGAG00000001004	PARN	89	85.340	ENSGGOG00000025224	PARN	88	100.000	Gorilla_gorilla
ENSMGAG00000001004	PARN	90	72.396	ENSHBUG00000017906	parn	92	72.531	Haplochromis_burtoni
ENSMGAG00000001004	PARN	95	80.395	ENSHGLG00000010886	PARN	95	80.395	Heterocephalus_glaber_female
ENSMGAG00000001004	PARN	95	80.395	ENSHGLG00100014659	PARN	95	80.395	Heterocephalus_glaber_male
ENSMGAG00000001004	PARN	86	67.979	ENSHCOG00000008683	parn	96	67.979	Hippocampus_comes
ENSMGAG00000001004	PARN	94	59.599	ENSIPUG00000012401	parn	84	61.296	Ictalurus_punctatus
ENSMGAG00000001004	PARN	95	81.713	ENSSTOG00000007519	PARN	95	81.713	Ictidomys_tridecemlineatus
ENSMGAG00000001004	PARN	95	79.373	ENSJJAG00000023049	Parn	95	79.373	Jaculus_jaculus
ENSMGAG00000001004	PARN	89	72.775	ENSKMAG00000009462	parn	81	72.775	Kryptolebias_marmoratus
ENSMGAG00000001004	PARN	97	67.040	ENSLBEG00000009167	parn	94	67.040	Labrus_bergylta
ENSMGAG00000001004	PARN	72	81.210	ENSLACG00000004207	PARN	97	75.669	Latimeria_chalumnae
ENSMGAG00000001004	PARN	90	76.182	ENSLOCG00000000715	parn	84	75.172	Lepisosteus_oculatus
ENSMGAG00000001004	PARN	95	81.908	ENSLAFG00000015036	PARN	95	81.908	Loxodonta_africana
ENSMGAG00000001004	PARN	90	81.959	ENSMFAG00000044852	PARN	94	100.000	Macaca_fascicularis
ENSMGAG00000001004	PARN	95	82.871	ENSMMUG00000018849	PARN	94	100.000	Macaca_mulatta
ENSMGAG00000001004	PARN	95	82.871	ENSMNEG00000045108	PARN	94	100.000	Macaca_nemestrina
ENSMGAG00000001004	PARN	95	82.708	ENSMLEG00000031743	PARN	94	100.000	Mandrillus_leucophaeus
ENSMGAG00000001004	PARN	91	70.377	ENSMAMG00000006939	parn	83	70.377	Mastacembelus_armatus
ENSMGAG00000001004	PARN	90	72.396	ENSMZEG00005013590	parn	94	72.598	Maylandia_zebra
ENSMGAG00000001004	PARN	91	75.382	ENSMAUG00000008025	Parn	94	75.382	Mesocricetus_auratus
ENSMGAG00000001004	PARN	95	82.730	ENSMICG00000016053	PARN	94	96.552	Microcebus_murinus
ENSMGAG00000001004	PARN	73	86.853	ENSMOCG00000022211	Parn	94	86.853	Microtus_ochrogaster
ENSMGAG00000001004	PARN	83	71.747	ENSMMOG00000011333	parn	88	71.747	Mola_mola
ENSMGAG00000001004	PARN	74	91.525	ENSMODG00000004915	PARN	95	91.525	Monodelphis_domestica
ENSMGAG00000001004	PARN	87	72.679	ENSMALG00000019426	parn	89	75.758	Monopterus_albus
ENSMGAG00000001004	PARN	95	79.112	MGP_CAROLIEiJ_G0020466	Parn	95	79.112	Mus_caroli
ENSMGAG00000001004	PARN	95	78.618	ENSMUSG00000022685	Parn	95	78.618	Mus_musculus
ENSMGAG00000001004	PARN	95	79.276	MGP_PahariEiJ_G0016172	Parn	95	79.276	Mus_pahari
ENSMGAG00000001004	PARN	95	78.783	MGP_SPRETEiJ_G0021361	Parn	95	78.783	Mus_spretus
ENSMGAG00000001004	PARN	95	81.414	ENSMPUG00000014464	PARN	95	81.414	Mustela_putorius_furo
ENSMGAG00000001004	PARN	73	88.793	ENSMLUG00000005414	PARN	94	88.793	Myotis_lucifugus
ENSMGAG00000001004	PARN	87	71.993	ENSNBRG00000006805	parn	93	71.993	Neolamprologus_brichardi
ENSMGAG00000001004	PARN	95	82.708	ENSNLEG00000010241	PARN	94	100.000	Nomascus_leucogenys
ENSMGAG00000001004	PARN	98	56.688	ENSMEUG00000008178	-	99	56.688	Notamacropus_eugenii
ENSMGAG00000001004	PARN	95	76.974	ENSOPRG00000012187	PARN	96	76.974	Ochotona_princeps
ENSMGAG00000001004	PARN	95	73.813	ENSODEG00000001617	PARN	95	73.813	Octodon_degus
ENSMGAG00000001004	PARN	90	72.569	ENSONIG00000000151	parn	82	76.460	Oreochromis_niloticus
ENSMGAG00000001004	PARN	59	82.447	ENSOANG00000020155	-	97	82.447	Ornithorhynchus_anatinus
ENSMGAG00000001004	PARN	95	82.895	ENSOCUG00000000322	PARN	96	82.895	Oryctolagus_cuniculus
ENSMGAG00000001004	PARN	87	72.172	ENSORLG00020010313	parn	81	72.172	Oryzias_latipes_hni
ENSMGAG00000001004	PARN	87	71.993	ENSORLG00015000300	parn	81	71.993	Oryzias_latipes_hsok
ENSMGAG00000001004	PARN	88	72.469	ENSOMEG00000019555	parn	82	72.469	Oryzias_melastigma
ENSMGAG00000001004	PARN	73	87.742	ENSOGAG00000014626	PARN	94	87.742	Otolemur_garnettii
ENSMGAG00000001004	PARN	73	90.733	ENSOARG00000007574	PARN	94	90.733	Ovis_aries
ENSMGAG00000001004	PARN	95	82.708	ENSPPAG00000031438	PARN	94	100.000	Pan_paniscus
ENSMGAG00000001004	PARN	95	82.401	ENSPPRG00000018583	PARN	94	96.552	Panthera_pardus
ENSMGAG00000001004	PARN	95	82.237	ENSPTIG00000012135	PARN	94	96.552	Panthera_tigris_altaica
ENSMGAG00000001004	PARN	95	82.382	ENSPTRG00000007792	PARN	94	100.000	Pan_troglodytes
ENSMGAG00000001004	PARN	95	79.608	ENSPANG00000020099	PARN	93	100.000	Papio_anubis
ENSMGAG00000001004	PARN	91	72.539	ENSPKIG00000022807	parn	89	68.547	Paramormyrops_kingsleyae
ENSMGAG00000001004	PARN	94	86.120	ENSPSIG00000014804	PARN	100	85.962	Pelodiscus_sinensis
ENSMGAG00000001004	PARN	77	76.327	ENSPMGG00000014431	parn	76	70.932	Periophthalmus_magnuspinnatus
ENSMGAG00000001004	PARN	95	76.480	ENSPEMG00000018439	Parn	95	76.480	Peromyscus_maniculatus_bairdii
ENSMGAG00000001004	PARN	78	66.197	ENSPMAG00000003956	parn	94	66.197	Petromyzon_marinus
ENSMGAG00000001004	PARN	63	82.707	ENSPCIG00000001259	PARN	86	82.456	Phascolarctos_cinereus
ENSMGAG00000001004	PARN	82	74.621	ENSPFOG00000012823	parn	82	70.364	Poecilia_formosa
ENSMGAG00000001004	PARN	82	74.811	ENSPLAG00000006395	parn	82	70.537	Poecilia_latipinna
ENSMGAG00000001004	PARN	82	74.811	ENSPMEG00000007711	parn	83	69.779	Poecilia_mexicana
ENSMGAG00000001004	PARN	82	74.432	ENSPREG00000000147	parn	83	69.440	Poecilia_reticulata
ENSMGAG00000001004	PARN	95	82.276	ENSPPYG00000007123	PARN	95	82.276	Pongo_abelii
ENSMGAG00000001004	PARN	95	72.231	ENSPCAG00000001741	PARN	100	72.231	Procavia_capensis
ENSMGAG00000001004	PARN	95	79.605	ENSPCOG00000019292	PARN	93	96.552	Propithecus_coquereli
ENSMGAG00000001004	PARN	95	78.947	ENSPVAG00000002547	PARN	96	78.947	Pteropus_vampyrus
ENSMGAG00000001004	PARN	90	72.396	ENSPNYG00000006835	parn	94	69.449	Pundamilia_nyererei
ENSMGAG00000001004	PARN	84	72.045	ENSPNAG00000018905	parn	85	72.045	Pygocentrus_nattereri
ENSMGAG00000001004	PARN	98	75.851	ENSRNOG00000002912	Parn	98	84.848	Rattus_norvegicus
ENSMGAG00000001004	PARN	52	76.855	ENSRBIG00000018726	PARN	100	76.855	Rhinopithecus_bieti
ENSMGAG00000001004	PARN	52	76.855	ENSRROG00000011162	-	100	76.855	Rhinopithecus_roxellana
ENSMGAG00000001004	PARN	95	80.424	ENSSBOG00000034726	PARN	94	100.000	Saimiri_boliviensis_boliviensis
ENSMGAG00000001004	PARN	63	89.724	ENSSHAG00000008493	PARN	89	89.724	Sarcophilus_harrisii
ENSMGAG00000001004	PARN	97	71.475	ENSSFOG00015014165	parn	91	72.680	Scleropages_formosus
ENSMGAG00000001004	PARN	97	66.558	ENSSMAG00000000685	parn	90	66.667	Scophthalmus_maximus
ENSMGAG00000001004	PARN	90	71.404	ENSSDUG00000014555	parn	82	72.203	Seriola_dumerili
ENSMGAG00000001004	PARN	91	72.664	ENSSARG00000014339	PARN	100	72.664	Sorex_araneus
ENSMGAG00000001004	PARN	96	87.134	ENSSPUG00000007719	PARN	96	87.134	Sphenodon_punctatus
ENSMGAG00000001004	PARN	90	72.474	ENSSPAG00000007095	parn	96	64.715	Stegastes_partitus
ENSMGAG00000001004	PARN	95	81.506	ENSSSCG00000007878	PARN	85	81.506	Sus_scrofa
ENSMGAG00000001004	PARN	96	92.182	ENSTGUG00000004971	PARN	96	92.182	Taeniopygia_guttata
ENSMGAG00000001004	PARN	55	30.362	ENSTGUG00000011418	PNLDC1	68	30.362	Taeniopygia_guttata
ENSMGAG00000001004	PARN	98	66.772	ENSTNIG00000008252	parn	98	67.680	Tetraodon_nigroviridis
ENSMGAG00000001004	PARN	91	68.566	ENSTBEG00000010407	PARN	100	68.566	Tupaia_belangeri
ENSMGAG00000001004	PARN	95	77.176	ENSTTRG00000002843	PARN	96	77.176	Tursiops_truncatus
ENSMGAG00000001004	PARN	73	75.107	ENSUAMG00000008283	PARN	95	75.107	Ursus_americanus
ENSMGAG00000001004	PARN	95	81.506	ENSUMAG00000004527	PARN	95	81.506	Ursus_maritimus
ENSMGAG00000001004	PARN	89	81.930	ENSVPAG00000008968	PARN	93	81.930	Vicugna_pacos
ENSMGAG00000001004	PARN	95	81.414	ENSVVUG00000019509	PARN	95	81.414	Vulpes_vulpes
ENSMGAG00000001004	PARN	99	75.279	ENSXETG00000010994	parn	98	82.012	Xenopus_tropicalis
ENSMGAG00000001004	PARN	89	67.311	ENSXCOG00000015990	parn	95	66.382	Xiphophorus_couchianus
ENSMGAG00000001004	PARN	91	69.336	ENSXMAG00000014783	parn	83	69.336	Xiphophorus_maculatus