EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000001121 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 42427 bases
Position: chr22:734708-777134
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000000593	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000001235	CHD6-201	8022	-	ENSMGAP00000000593	2673 (aa)	-	G1MR36

Gene Model

Click here to download ENSMGAG00000001121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000001121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000001121	CHD6	82	57.786	ENSMGAG00000004642	CHD9	74	60.397
ENSMGAG00000001121	CHD6	77	65.813	ENSMGAG00000011092	CHD7	72	64.987

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000001121	CHD6	100	72.080	ENSG00000124177	CHD6	99	93.411	Homo_sapiens
ENSMGAG00000001121	CHD6	76	74.166	ENSAPOG00000013736	chd6	66	74.426	Acanthochromis_polyacanthus
ENSMGAG00000001121	CHD6	100	72.257	ENSAMEG00000009496	CHD6	99	71.637	Ailuropoda_melanoleuca
ENSMGAG00000001121	CHD6	79	71.526	ENSATEG00000005608	chd6	63	76.096	Anabas_testudineus
ENSMGAG00000001121	CHD6	99	89.454	ENSAPLG00000015592	CHD6	99	89.697	Anas_platyrhynchos
ENSMGAG00000001121	CHD6	99	71.937	ENSACAG00000006842	CHD6	99	71.668	Anolis_carolinensis
ENSMGAG00000001121	CHD6	99	71.941	ENSANAG00000037548	CHD6	99	89.011	Aotus_nancymaae
ENSMGAG00000001121	CHD6	77	72.825	ENSAMXG00000009576	chd6	74	71.887	Astyanax_mexicanus
ENSMGAG00000001121	CHD6	93	80.056	ENSBTAG00000005733	CHD6	99	70.914	Bos_taurus
ENSMGAG00000001121	CHD6	100	72.003	ENSCJAG00000017920	CHD6	99	89.194	Callithrix_jacchus
ENSMGAG00000001121	CHD6	100	72.206	ENSCAFG00000009236	CHD6	99	71.376	Canis_familiaris
ENSMGAG00000001121	CHD6	100	71.877	ENSCAFG00020012906	CHD6	95	91.522	Canis_lupus_dingo
ENSMGAG00000001121	CHD6	99	71.303	ENSCHIG00000017606	CHD6	99	70.642	Capra_hircus
ENSMGAG00000001121	CHD6	100	72.385	ENSCPOG00000015641	CHD6	99	71.946	Cavia_porcellus
ENSMGAG00000001121	CHD6	100	71.908	ENSCCAG00000036828	CHD6	99	89.011	Cebus_capucinus
ENSMGAG00000001121	CHD6	99	71.837	ENSCATG00000039248	CHD6	99	89.011	Cercocebus_atys
ENSMGAG00000001121	CHD6	100	71.895	ENSCLAG00000013743	CHD6	99	71.491	Chinchilla_lanigera
ENSMGAG00000001121	CHD6	100	71.904	ENSCSAG00000013997	CHD6	99	71.100	Chlorocebus_sabaeus
ENSMGAG00000001121	CHD6	91	78.041	ENSCHOG00000012647	CHD6	94	77.734	Choloepus_hoffmanni
ENSMGAG00000001121	CHD6	99	82.181	ENSCPBG00000019382	CHD6	100	80.490	Chrysemys_picta_bellii
ENSMGAG00000001121	CHD6	100	72.003	ENSCANG00000043435	CHD6	99	89.011	Colobus_angolensis_palliatus
ENSMGAG00000001121	CHD6	99	71.643	ENSCGRG00001002694	Chd6	99	71.167	Cricetulus_griseus_chok1gshd
ENSMGAG00000001121	CHD6	81	74.361	ENSDARG00000017244	chd6	75	75.376	Danio_rerio
ENSMGAG00000001121	CHD6	99	72.383	ENSDNOG00000004176	CHD6	99	71.633	Dasypus_novemcinctus
ENSMGAG00000001121	CHD6	100	71.830	ENSEASG00005023433	CHD6	95	93.449	Equus_asinus_asinus
ENSMGAG00000001121	CHD6	100	72.259	ENSECAG00000011761	CHD6	99	71.507	Equus_caballus
ENSMGAG00000001121	CHD6	76	77.080	ENSELUG00000012309	chd6	91	77.080	Esox_lucius
ENSMGAG00000001121	CHD6	100	72.092	ENSFCAG00000003572	CHD6	99	71.355	Felis_catus
ENSMGAG00000001121	CHD6	100	86.611	ENSFALG00000012563	CHD6	98	86.647	Ficedula_albicollis
ENSMGAG00000001121	CHD6	99	72.463	ENSFDAG00000013791	CHD6	99	71.838	Fukomys_damarensis
ENSMGAG00000001121	CHD6	78	68.214	ENSGMOG00000011715	chd6	89	69.107	Gadus_morhua
ENSMGAG00000001121	CHD6	78	69.794	ENSGACG00000000037	chd6	83	70.607	Gasterosteus_aculeatus
ENSMGAG00000001121	CHD6	100	72.044	ENSGGOG00000013123	CHD6	99	89.011	Gorilla_gorilla
ENSMGAG00000001121	CHD6	78	72.212	ENSHBUG00000014701	chd6	64	75.787	Haplochromis_burtoni
ENSMGAG00000001121	CHD6	100	72.056	ENSHGLG00000004548	CHD6	99	71.324	Heterocephalus_glaber_female
ENSMGAG00000001121	CHD6	100	72.056	ENSHGLG00100006401	CHD6	99	71.324	Heterocephalus_glaber_male
ENSMGAG00000001121	CHD6	77	76.630	ENSIPUG00000003692	chd6	74	75.600	Ictalurus_punctatus
ENSMGAG00000001121	CHD6	100	71.622	ENSSTOG00000013382	CHD6	99	70.698	Ictidomys_tridecemlineatus
ENSMGAG00000001121	CHD6	85	76.029	ENSLACG00000010881	CHD6	85	74.392	Latimeria_chalumnae
ENSMGAG00000001121	CHD6	74	78.739	ENSLOCG00000007386	chd6	80	78.453	Lepisosteus_oculatus
ENSMGAG00000001121	CHD6	99	72.714	ENSLAFG00000012144	CHD6	99	71.919	Loxodonta_africana
ENSMGAG00000001121	CHD6	99	71.956	ENSMFAG00000032830	CHD6	99	89.011	Macaca_fascicularis
ENSMGAG00000001121	CHD6	99	71.956	ENSMMUG00000020458	CHD6	99	89.011	Macaca_mulatta
ENSMGAG00000001121	CHD6	99	71.956	ENSMNEG00000040847	CHD6	99	89.011	Macaca_nemestrina
ENSMGAG00000001121	CHD6	100	72.023	ENSMLEG00000031965	CHD6	99	89.011	Mandrillus_leucophaeus
ENSMGAG00000001121	CHD6	78	71.940	ENSMAMG00000013111	chd6	63	76.377	Mastacembelus_armatus
ENSMGAG00000001121	CHD6	100	72.145	ENSMICG00000016641	CHD6	99	88.645	Microcebus_murinus
ENSMGAG00000001121	CHD6	89	75.276	ENSMODG00000000720	-	93	80.819	Monodelphis_domestica
ENSMGAG00000001121	CHD6	99	71.083	MGP_CAROLIEiJ_G0024604	Chd6	99	85.191	Mus_caroli
ENSMGAG00000001121	CHD6	100	71.056	ENSMUSG00000057133	Chd6	99	85.021	Mus_musculus
ENSMGAG00000001121	CHD6	99	71.109	MGP_PahariEiJ_G0026048	Chd6	99	85.362	Mus_pahari
ENSMGAG00000001121	CHD6	100	71.130	MGP_SPRETEiJ_G0025526	Chd6	99	85.106	Mus_spretus
ENSMGAG00000001121	CHD6	100	71.366	ENSMPUG00000017695	CHD6	99	70.803	Mustela_putorius_furo
ENSMGAG00000001121	CHD6	100	71.836	ENSMLUG00000016247	CHD6	99	71.345	Myotis_lucifugus
ENSMGAG00000001121	CHD6	81	71.026	ENSNBRG00000013839	chd6	81	70.186	Neolamprologus_brichardi
ENSMGAG00000001121	CHD6	99	70.760	ENSNLEG00000006496	CHD6	99	69.934	Nomascus_leucogenys
ENSMGAG00000001121	CHD6	99	70.147	ENSOPRG00000013376	-	99	69.511	Ochotona_princeps
ENSMGAG00000001121	CHD6	82	74.171	ENSONIG00000000393	chd6	83	73.924	Oreochromis_niloticus
ENSMGAG00000001121	CHD6	99	71.208	ENSOCUG00000012394	CHD6	99	70.370	Oryctolagus_cuniculus
ENSMGAG00000001121	CHD6	83	70.279	ENSORLG00020021891	chd6	95	86.400	Oryzias_latipes_hni
ENSMGAG00000001121	CHD6	99	71.675	ENSOGAG00000002427	CHD6	99	71.193	Otolemur_garnettii
ENSMGAG00000001121	CHD6	99	69.479	ENSOARG00000002597	CHD6	99	68.892	Ovis_aries
ENSMGAG00000001121	CHD6	100	71.940	ENSPPRG00000014756	CHD6	99	71.282	Panthera_pardus
ENSMGAG00000001121	CHD6	100	71.904	ENSPTIG00000011094	CHD6	99	71.246	Panthera_tigris_altaica
ENSMGAG00000001121	CHD6	100	72.044	ENSPTRG00000013504	CHD6	99	89.011	Pan_troglodytes
ENSMGAG00000001121	CHD6	100	71.950	ENSPANG00000025554	CHD6	99	89.194	Papio_anubis
ENSMGAG00000001121	CHD6	78	75.962	ENSPKIG00000005578	chd6	74	77.646	Paramormyrops_kingsleyae
ENSMGAG00000001121	CHD6	77	73.652	ENSPMGG00000014877	chd6	87	73.720	Periophthalmus_magnuspinnatus
ENSMGAG00000001121	CHD6	99	73.717	ENSPCIG00000028037	CHD6	99	74.588	Phascolarctos_cinereus
ENSMGAG00000001121	CHD6	75	72.530	ENSPLAG00000003128	chd6	68	73.111	Poecilia_latipinna
ENSMGAG00000001121	CHD6	75	72.324	ENSPREG00000022653	chd6	99	87.020	Poecilia_reticulata
ENSMGAG00000001121	CHD6	100	71.772	ENSPPYG00000011016	CHD6	99	71.069	Pongo_abelii
ENSMGAG00000001121	CHD6	100	72.308	ENSPCOG00000001089	CHD6	99	88.828	Propithecus_coquereli
ENSMGAG00000001121	CHD6	79	74.067	ENSPNYG00000022516	chd6	75	77.165	Pundamilia_nyererei
ENSMGAG00000001121	CHD6	77	72.977	ENSPNAG00000012825	chd6	76	72.527	Pygocentrus_nattereri
ENSMGAG00000001121	CHD6	99	71.172	ENSRNOG00000016744	Chd6	99	70.337	Rattus_norvegicus
ENSMGAG00000001121	CHD6	100	71.861	ENSSBOG00000022089	CHD6	99	89.011	Saimiri_boliviensis_boliviensis
ENSMGAG00000001121	CHD6	99	74.431	ENSSHAG00000017072	CHD6	99	74.367	Sarcophilus_harrisii
ENSMGAG00000001121	CHD6	80	74.260	ENSSFOG00015012920	chd6	77	74.689	Scleropages_formosus
ENSMGAG00000001121	CHD6	57	98.026	ENSSARG00000002615	-	58	98.026	Sorex_araneus
ENSMGAG00000001121	CHD6	99	72.057	ENSSSCG00000007360	CHD6	99	73.448	Sus_scrofa
ENSMGAG00000001121	CHD6	97	88.175	ENSTGUG00000003179	CHD6	100	88.251	Taeniopygia_guttata
ENSMGAG00000001121	CHD6	73	75.425	ENSTNIG00000017487	chd6	84	73.778	Tetraodon_nigroviridis
ENSMGAG00000001121	CHD6	99	69.613	ENSTTRG00000013438	CHD6	99	68.955	Tursiops_truncatus
ENSMGAG00000001121	CHD6	100	71.017	ENSUAMG00000024036	CHD6	95	91.522	Ursus_americanus
ENSMGAG00000001121	CHD6	100	72.137	ENSUMAG00000002017	CHD6	95	91.522	Ursus_maritimus
ENSMGAG00000001121	CHD6	86	78.796	ENSVPAG00000007941	CHD6	86	77.565	Vicugna_pacos
ENSMGAG00000001121	CHD6	100	72.332	ENSVVUG00000029164	CHD6	99	71.674	Vulpes_vulpes
ENSMGAG00000001121	CHD6	83	73.982	ENSXETG00000021445	chd6	87	71.016	Xenopus_tropicalis