EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000001330 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 11382 bases
Position: chrGL424225.1:8470-19851
Accession: 100540566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000017475	PRP21_like_P	PF12230.8	3.7e-52	1	1
ENSMGAP00000000782	PRP21_like_P	PF12230.8	3.7e-52	1	1
ENSMGAP00000017475	Surp	PF01805.20	3.4e-46	1	2
ENSMGAP00000017475	Surp	PF01805.20	3.4e-46	2	2
ENSMGAP00000000782	Surp	PF01805.20	3.4e-46	1	2
ENSMGAP00000000782	Surp	PF01805.20	3.4e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000001428	SF3A1-201	2964	XM_010720425	ENSMGAP00000000782	770 (aa)	XP_010718727	H9H083
ENSMGAT00000019252	SF3A1-202	2961	-	ENSMGAP00000017475	768 (aa)	-	H9H266

Gene Model

Click here to download ENSMGAG00000001330's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000001330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000001330	SF3A1	99	93.669	ENSG00000099995	SF3A1	95	94.048	Homo_sapiens
ENSMGAG00000001330	SF3A1	99	85.455	ENSAPOG00000020465	sf3a1	96	84.960	Acanthochromis_polyacanthus
ENSMGAG00000001330	SF3A1	99	93.498	ENSAMEG00000007737	SF3A1	95	94.180	Ailuropoda_melanoleuca
ENSMGAG00000001330	SF3A1	100	84.981	ENSACIG00000020672	sf3a1	96	84.565	Amphilophus_citrinellus
ENSMGAG00000001330	SF3A1	100	84.852	ENSAOCG00000003060	sf3a1	96	85.092	Amphiprion_ocellaris
ENSMGAG00000001330	SF3A1	100	84.981	ENSAPEG00000010735	sf3a1	96	85.092	Amphiprion_percula
ENSMGAG00000001330	SF3A1	99	85.007	ENSATEG00000021201	sf3a1	95	84.433	Anabas_testudineus
ENSMGAG00000001330	SF3A1	100	99.611	ENSAPLG00000009057	SF3A1	99	99.611	Anas_platyrhynchos
ENSMGAG00000001330	SF3A1	99	87.817	ENSACAG00000009415	SF3A1	96	89.004	Anolis_carolinensis
ENSMGAG00000001330	SF3A1	100	93.523	ENSANAG00000032045	SF3A1	95	94.444	Aotus_nancymaae
ENSMGAG00000001330	SF3A1	100	85.071	ENSACLG00000012622	sf3a1	96	86.376	Astatotilapia_calliptera
ENSMGAG00000001330	SF3A1	99	83.808	ENSAMXG00000005382	sf3a1	97	84.737	Astyanax_mexicanus
ENSMGAG00000001330	SF3A1	99	93.282	ENSBTAG00000003390	SF3A1	95	94.180	Bos_taurus
ENSMGAG00000001330	SF3A1	85	44.790	WBGene00004188	prp-21	88	45.098	Caenorhabditis_elegans
ENSMGAG00000001330	SF3A1	100	93.523	ENSCJAG00000010370	SF3A1	95	94.444	Callithrix_jacchus
ENSMGAG00000001330	SF3A1	99	93.282	ENSCAFG00000012559	SF3A1	95	94.180	Canis_familiaris
ENSMGAG00000001330	SF3A1	99	93.282	ENSCAFG00020000838	SF3A1	95	94.180	Canis_lupus_dingo
ENSMGAG00000001330	SF3A1	99	93.152	ENSCHIG00000018642	SF3A1	95	94.048	Capra_hircus
ENSMGAG00000001330	SF3A1	99	93.282	ENSTSYG00000004739	SF3A1	95	94.180	Carlito_syrichta
ENSMGAG00000001330	SF3A1	97	76.872	ENSCAPG00000015414	SF3A1	96	77.143	Cavia_aperea
ENSMGAG00000001330	SF3A1	99	93.540	ENSCPOG00000014589	SF3A1	95	94.048	Cavia_porcellus
ENSMGAG00000001330	SF3A1	100	93.523	ENSCCAG00000032006	SF3A1	95	94.444	Cebus_capucinus
ENSMGAG00000001330	SF3A1	99	93.282	ENSCATG00000029241	SF3A1	95	94.180	Cercocebus_atys
ENSMGAG00000001330	SF3A1	99	93.126	ENSCLAG00000006508	SF3A1	95	93.651	Chinchilla_lanigera
ENSMGAG00000001330	SF3A1	99	93.411	ENSCSAG00000009470	SF3A1	95	94.180	Chlorocebus_sabaeus
ENSMGAG00000001330	SF3A1	60	96.190	ENSCHOG00000005201	SF3A1	64	96.190	Choloepus_hoffmanni
ENSMGAG00000001330	SF3A1	99	96.489	ENSCPBG00000007595	SF3A1	97	96.489	Chrysemys_picta_bellii
ENSMGAG00000001330	SF3A1	97	52.249	ENSCING00000008526	-	96	52.219	Ciona_intestinalis
ENSMGAG00000001330	SF3A1	89	67.636	ENSCSAVG00000005608	-	91	63.559	Ciona_savignyi
ENSMGAG00000001330	SF3A1	99	93.411	ENSCANG00000033564	SF3A1	95	94.180	Colobus_angolensis_palliatus
ENSMGAG00000001330	SF3A1	99	93.693	ENSCGRG00001008933	Sf3a1	95	93.783	Cricetulus_griseus_chok1gshd
ENSMGAG00000001330	SF3A1	99	93.693	ENSCGRG00000006127	Sf3a1	95	93.783	Cricetulus_griseus_crigri
ENSMGAG00000001330	SF3A1	99	83.159	ENSCSEG00000010792	sf3a1	96	83.509	Cynoglossus_semilaevis
ENSMGAG00000001330	SF3A1	99	83.700	ENSCVAG00000004560	sf3a1	96	83.091	Cyprinodon_variegatus
ENSMGAG00000001330	SF3A1	100	83.033	ENSDARG00000041887	sf3a1	96	84.544	Danio_rerio
ENSMGAG00000001330	SF3A1	99	93.041	ENSDNOG00000010629	SF3A1	95	93.404	Dasypus_novemcinctus
ENSMGAG00000001330	SF3A1	99	93.669	ENSDORG00000005613	Sf3a1	95	94.180	Dipodomys_ordii
ENSMGAG00000001330	SF3A1	67	60.401	FBgn0266917	Sf3a1	68	60.595	Drosophila_melanogaster
ENSMGAG00000001330	SF3A1	87	93.862	ENSETEG00000017194	SF3A1	95	93.524	Echinops_telfairi
ENSMGAG00000001330	SF3A1	99	68.329	ENSEBUG00000001285	sf3a1	94	68.608	Eptatretus_burgeri
ENSMGAG00000001330	SF3A1	99	93.645	ENSEASG00005010254	SF3A1	95	94.180	Equus_asinus_asinus
ENSMGAG00000001330	SF3A1	99	93.645	ENSECAG00000023962	SF3A1	95	94.180	Equus_caballus
ENSMGAG00000001330	SF3A1	75	93.443	ENSEEUG00000003159	SF3A1	79	93.443	Erinaceus_europaeus
ENSMGAG00000001330	SF3A1	99	82.277	ENSELUG00000022578	sf3a1	96	82.152	Esox_lucius
ENSMGAG00000001330	SF3A1	99	93.411	ENSFCAG00000011932	SF3A1	95	94.312	Felis_catus
ENSMGAG00000001330	SF3A1	99	97.917	ENSFALG00000006944	SF3A1	97	97.917	Ficedula_albicollis
ENSMGAG00000001330	SF3A1	99	92.894	ENSFDAG00000009560	SF3A1	95	93.783	Fukomys_damarensis
ENSMGAG00000001330	SF3A1	99	84.525	ENSFHEG00000010866	sf3a1	96	85.488	Fundulus_heteroclitus
ENSMGAG00000001330	SF3A1	99	81.664	ENSGMOG00000016024	sf3a1	96	80.079	Gadus_morhua
ENSMGAG00000001330	SF3A1	99	100.000	ENSGALG00000007937	SF3A1	97	100.000	Gallus_gallus
ENSMGAG00000001330	SF3A1	99	84.176	ENSGAFG00000009111	sf3a1	96	83.752	Gambusia_affinis
ENSMGAG00000001330	SF3A1	99	83.181	ENSGACG00000011893	sf3a1	96	82.781	Gasterosteus_aculeatus
ENSMGAG00000001330	SF3A1	96	94.429	ENSGAGG00000000762	SF3A1	95	94.591	Gopherus_agassizii
ENSMGAG00000001330	SF3A1	99	93.669	ENSGGOG00000012631	SF3A1	95	94.048	Gorilla_gorilla
ENSMGAG00000001330	SF3A1	100	85.071	ENSHBUG00000015795	sf3a1	96	86.376	Haplochromis_burtoni
ENSMGAG00000001330	SF3A1	99	93.152	ENSHGLG00000007907	SF3A1	95	94.048	Heterocephalus_glaber_female
ENSMGAG00000001330	SF3A1	99	93.152	ENSHGLG00100013799	SF3A1	95	94.048	Heterocephalus_glaber_male
ENSMGAG00000001330	SF3A1	99	82.092	ENSHCOG00000015423	sf3a1	97	81.506	Hippocampus_comes
ENSMGAG00000001330	SF3A1	99	81.842	ENSIPUG00000002470	sf3a1	97	82.740	Ictalurus_punctatus
ENSMGAG00000001330	SF3A1	99	93.411	ENSSTOG00000013892	SF3A1	95	94.312	Ictidomys_tridecemlineatus
ENSMGAG00000001330	SF3A1	99	93.653	ENSJJAG00000022566	Sf3a1	95	94.312	Jaculus_jaculus
ENSMGAG00000001330	SF3A1	99	84.073	ENSKMAG00000002400	sf3a1	96	84.169	Kryptolebias_marmoratus
ENSMGAG00000001330	SF3A1	100	83.162	ENSLBEG00000022974	sf3a1	96	84.169	Labrus_bergylta
ENSMGAG00000001330	SF3A1	99	86.623	ENSLACG00000003565	SF3A1	96	88.391	Latimeria_chalumnae
ENSMGAG00000001330	SF3A1	99	86.788	ENSLOCG00000008251	sf3a1	96	87.500	Lepisosteus_oculatus
ENSMGAG00000001330	SF3A1	99	93.282	ENSLAFG00000000448	SF3A1	95	94.312	Loxodonta_africana
ENSMGAG00000001330	SF3A1	99	60.130	ENSLAFG00000026032	-	96	60.053	Loxodonta_africana
ENSMGAG00000001330	SF3A1	99	93.282	ENSMFAG00000031979	SF3A1	95	94.048	Macaca_fascicularis
ENSMGAG00000001330	SF3A1	99	93.282	ENSMMUG00000005547	SF3A1	95	94.048	Macaca_mulatta
ENSMGAG00000001330	SF3A1	99	93.411	ENSMNEG00000037229	SF3A1	95	94.180	Macaca_nemestrina
ENSMGAG00000001330	SF3A1	99	93.411	ENSMLEG00000041908	SF3A1	95	94.180	Mandrillus_leucophaeus
ENSMGAG00000001330	SF3A1	100	84.884	ENSMAMG00000006460	sf3a1	95	85.092	Mastacembelus_armatus
ENSMGAG00000001330	SF3A1	100	85.071	ENSMZEG00005009633	sf3a1	96	86.376	Maylandia_zebra
ENSMGAG00000001330	SF3A1	95	90.041	ENSMAUG00000020317	Sf3a1	94	89.905	Mesocricetus_auratus
ENSMGAG00000001330	SF3A1	99	93.411	ENSMICG00000010038	SF3A1	95	94.312	Microcebus_murinus
ENSMGAG00000001330	SF3A1	100	93.135	ENSMOCG00000008438	Sf3a1	95	94.048	Microtus_ochrogaster
ENSMGAG00000001330	SF3A1	100	82.406	ENSMMOG00000015588	sf3a1	96	81.506	Mola_mola
ENSMGAG00000001330	SF3A1	99	94.141	ENSMODG00000009270	SF3A1	95	95.099	Monodelphis_domestica
ENSMGAG00000001330	SF3A1	99	85.229	ENSMALG00000000148	sf3a1	99	83.946	Monopterus_albus
ENSMGAG00000001330	SF3A1	100	92.487	MGP_CAROLIEiJ_G0016029	Sf3a1	95	93.519	Mus_caroli
ENSMGAG00000001330	SF3A1	100	92.487	ENSMUSG00000002129	Sf3a1	95	93.519	Mus_musculus
ENSMGAG00000001330	SF3A1	100	92.358	MGP_PahariEiJ_G0016862	Sf3a1	95	93.386	Mus_pahari
ENSMGAG00000001330	SF3A1	100	92.487	MGP_SPRETEiJ_G0016870	Sf3a1	95	93.519	Mus_spretus
ENSMGAG00000001330	SF3A1	99	93.152	ENSMPUG00000013144	SF3A1	95	94.048	Mustela_putorius_furo
ENSMGAG00000001330	SF3A1	99	93.282	ENSMLUG00000002139	SF3A1	95	94.180	Myotis_lucifugus
ENSMGAG00000001330	SF3A1	99	93.774	ENSNGAG00000016977	Sf3a1	95	93.915	Nannospalax_galili
ENSMGAG00000001330	SF3A1	99	85.864	ENSNBRG00000016642	sf3a1	96	86.376	Neolamprologus_brichardi
ENSMGAG00000001330	SF3A1	99	93.411	ENSNLEG00000003686	SF3A1	95	94.180	Nomascus_leucogenys
ENSMGAG00000001330	SF3A1	95	85.714	ENSMEUG00000008741	SF3A1	95	86.150	Notamacropus_eugenii
ENSMGAG00000001330	SF3A1	99	93.856	ENSOPRG00000016636	SF3A1	95	94.180	Ochotona_princeps
ENSMGAG00000001330	SF3A1	99	93.498	ENSODEG00000002571	SF3A1	95	94.048	Octodon_degus
ENSMGAG00000001330	SF3A1	100	83.419	ENSONIG00000010848	sf3a1	96	84.941	Oreochromis_niloticus
ENSMGAG00000001330	SF3A1	99	93.264	ENSOCUG00000007633	SF3A1	95	94.048	Oryctolagus_cuniculus
ENSMGAG00000001330	SF3A1	95	83.832	ENSORLG00000013050	sf3a1	95	85.083	Oryzias_latipes
ENSMGAG00000001330	SF3A1	97	82.846	ENSORLG00020003236	sf3a1	93	83.649	Oryzias_latipes_hni
ENSMGAG00000001330	SF3A1	99	83.724	ENSORLG00015017411	sf3a1	96	84.921	Oryzias_latipes_hsok
ENSMGAG00000001330	SF3A1	99	84.245	ENSOMEG00000013362	sf3a1	96	84.788	Oryzias_melastigma
ENSMGAG00000001330	SF3A1	99	93.152	ENSOGAG00000012931	SF3A1	95	94.048	Otolemur_garnettii
ENSMGAG00000001330	SF3A1	99	91.085	ENSOARG00000006849	SF3A1	95	91.799	Ovis_aries
ENSMGAG00000001330	SF3A1	99	92.636	ENSPPAG00000041790	SF3A1	95	92.989	Pan_paniscus
ENSMGAG00000001330	SF3A1	99	93.411	ENSPPRG00000004391	SF3A1	95	94.312	Panthera_pardus
ENSMGAG00000001330	SF3A1	99	93.498	ENSPTIG00000000844	SF3A1	98	94.048	Panthera_tigris_altaica
ENSMGAG00000001330	SF3A1	99	93.669	ENSPTRG00000014240	SF3A1	95	94.048	Pan_troglodytes
ENSMGAG00000001330	SF3A1	99	93.411	ENSPANG00000020772	SF3A1	95	94.180	Papio_anubis
ENSMGAG00000001330	SF3A1	85	94.505	ENSPSIG00000012803	SF3A1	93	97.665	Pelodiscus_sinensis
ENSMGAG00000001330	SF3A1	99	83.879	ENSPMGG00000023096	sf3a1	99	84.238	Periophthalmus_magnuspinnatus
ENSMGAG00000001330	SF3A1	99	93.955	ENSPEMG00000009494	Sf3a1	95	94.048	Peromyscus_maniculatus_bairdii
ENSMGAG00000001330	SF3A1	66	80.702	ENSPMAG00000007139	-	87	80.000	Petromyzon_marinus
ENSMGAG00000001330	SF3A1	99	93.766	ENSPCIG00000022692	SF3A1	95	94.702	Phascolarctos_cinereus
ENSMGAG00000001330	SF3A1	95	78.455	ENSPFOG00000016768	sf3a1	93	77.959	Poecilia_formosa
ENSMGAG00000001330	SF3A1	99	84.565	ENSPLAG00000017268	sf3a1	96	84.301	Poecilia_latipinna
ENSMGAG00000001330	SF3A1	86	84.581	ENSPMEG00000019811	sf3a1	98	84.488	Poecilia_mexicana
ENSMGAG00000001330	SF3A1	99	84.825	ENSPREG00000010347	sf3a1	96	84.960	Poecilia_reticulata
ENSMGAG00000001330	SF3A1	99	93.411	ENSPPYG00000011707	SF3A1	95	94.180	Pongo_abelii
ENSMGAG00000001330	SF3A1	59	95.851	ENSPCAG00000003266	SF3A1	56	95.851	Procavia_capensis
ENSMGAG00000001330	SF3A1	99	93.540	ENSPCOG00000026630	SF3A1	95	94.444	Propithecus_coquereli
ENSMGAG00000001330	SF3A1	97	92.895	ENSPVAG00000017719	SF3A1	94	92.761	Pteropus_vampyrus
ENSMGAG00000001330	SF3A1	100	85.071	ENSPNYG00000018706	sf3a1	96	86.376	Pundamilia_nyererei
ENSMGAG00000001330	SF3A1	99	83.679	ENSPNAG00000003721	sf3a1	97	84.211	Pygocentrus_nattereri
ENSMGAG00000001330	SF3A1	99	92.765	ENSRNOG00000005218	Sf3a1	95	93.651	Rattus_norvegicus
ENSMGAG00000001330	SF3A1	99	93.411	ENSRBIG00000032167	SF3A1	95	94.180	Rhinopithecus_bieti
ENSMGAG00000001330	SF3A1	99	93.411	ENSRROG00000044908	SF3A1	95	94.180	Rhinopithecus_roxellana
ENSMGAG00000001330	SF3A1	95	94.142	ENSSBOG00000021960	SF3A1	98	94.277	Saimiri_boliviensis_boliviensis
ENSMGAG00000001330	SF3A1	100	91.074	ENSSHAG00000003666	SF3A1	96	92.185	Sarcophilus_harrisii
ENSMGAG00000001330	SF3A1	99	84.149	ENSSFOG00015004579	sf3a1	96	85.808	Scleropages_formosus
ENSMGAG00000001330	SF3A1	99	82.445	ENSSMAG00000004275	sf3a1	96	82.299	Scophthalmus_maximus
ENSMGAG00000001330	SF3A1	100	84.833	ENSSDUG00000022219	sf3a1	96	84.676	Seriola_dumerili
ENSMGAG00000001330	SF3A1	100	84.833	ENSSLDG00000012642	sf3a1	96	84.676	Seriola_lalandi_dorsalis
ENSMGAG00000001330	SF3A1	99	90.980	ENSSARG00000005960	SF3A1	98	91.005	Sorex_araneus
ENSMGAG00000001330	SF3A1	99	93.506	ENSSPUG00000018863	SF3A1	96	94.503	Sphenodon_punctatus
ENSMGAG00000001330	SF3A1	99	85.566	ENSSPAG00000011856	sf3a1	96	85.205	Stegastes_partitus
ENSMGAG00000001330	SF3A1	99	93.023	ENSSSCG00000010002	SF3A1	95	93.915	Sus_scrofa
ENSMGAG00000001330	SF3A1	99	98.701	ENSTGUG00000010547	SF3A1	100	98.701	Taeniopygia_guttata
ENSMGAG00000001330	SF3A1	100	82.111	ENSTRUG00000006118	sf3a1	96	81.770	Takifugu_rubripes
ENSMGAG00000001330	SF3A1	63	84.701	ENSTNIG00000005713	sf3a1	89	84.956	Tetraodon_nigroviridis
ENSMGAG00000001330	SF3A1	99	86.563	ENSTBEG00000012771	SF3A1	95	87.302	Tupaia_belangeri
ENSMGAG00000001330	SF3A1	99	92.645	ENSTTRG00000001535	SF3A1	95	93.395	Tursiops_truncatus
ENSMGAG00000001330	SF3A1	99	92.448	ENSUAMG00000006750	SF3A1	94	93.333	Ursus_americanus
ENSMGAG00000001330	SF3A1	99	93.498	ENSUMAG00000016665	SF3A1	96	94.048	Ursus_maritimus
ENSMGAG00000001330	SF3A1	99	93.282	ENSVVUG00000003075	SF3A1	95	94.180	Vulpes_vulpes
ENSMGAG00000001330	SF3A1	98	87.615	ENSXETG00000016144	sf3a1	95	87.020	Xenopus_tropicalis
ENSMGAG00000001330	SF3A1	99	83.917	ENSXCOG00000015653	sf3a1	96	83.487	Xiphophorus_couchianus
ENSMGAG00000001330	SF3A1	99	84.047	ENSXMAG00000002753	sf3a1	96	83.620	Xiphophorus_maculatus