EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000001383 (Gene tree)
Gene ID: -
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 43986 bases
Position: chr5:678668-722653
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000000858	Suf	PF05843.14	1.7e-84	1	1
ENSMGAP00000019541	Suf	PF05843.14	1.9e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000001505	CSTF3-201	2715	-	ENSMGAP00000000858	718 (aa)	-	G1MRM6
ENSMGAT00000019708	CSTF3-202	2631	-	ENSMGAP00000019541	716 (aa)	-	G3UUS2

Gene Model

Click here to download ENSMGAG00000001383's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000001383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000001383	CSTF3	100	98.189	ENSG00000176102	CSTF3	100	98.189	Homo_sapiens
ENSMGAG00000001383	CSTF3	100	90.947	ENSAPOG00000014054	cstf3	100	90.947	Acanthochromis_polyacanthus
ENSMGAG00000001383	CSTF3	99	98.590	ENSAMEG00000007187	CSTF3	98	98.590	Ailuropoda_melanoleuca
ENSMGAG00000001383	CSTF3	88	85.510	ENSACIG00000005539	cstf3	100	85.920	Amphilophus_citrinellus
ENSMGAG00000001383	CSTF3	100	90.808	ENSAOCG00000010930	cstf3	100	90.808	Amphiprion_ocellaris
ENSMGAG00000001383	CSTF3	100	90.808	ENSAPEG00000007903	cstf3	100	90.808	Amphiprion_percula
ENSMGAG00000001383	CSTF3	100	91.086	ENSATEG00000000190	cstf3	100	91.086	Anabas_testudineus
ENSMGAG00000001383	CSTF3	99	99.294	ENSAPLG00000007217	CSTF3	100	99.294	Anas_platyrhynchos
ENSMGAG00000001383	CSTF3	100	96.240	ENSACAG00000002823	CSTF3	100	96.240	Anolis_carolinensis
ENSMGAG00000001383	CSTF3	100	98.189	ENSANAG00000020699	CSTF3	100	98.240	Aotus_nancymaae
ENSMGAG00000001383	CSTF3	99	91.243	ENSACLG00000007820	cstf3	100	90.669	Astatotilapia_calliptera
ENSMGAG00000001383	CSTF3	100	90.125	ENSAMXG00000014198	cstf3	100	90.403	Astyanax_mexicanus
ENSMGAG00000001383	CSTF3	100	98.189	ENSBTAG00000008617	CSTF3	100	98.368	Bos_taurus
ENSMGAG00000001383	CSTF3	98	48.977	WBGene00006307	suf-1	99	49.178	Caenorhabditis_elegans
ENSMGAG00000001383	CSTF3	100	98.189	ENSCJAG00000005533	CSTF3	100	98.240	Callithrix_jacchus
ENSMGAG00000001383	CSTF3	100	98.050	ENSCAFG00000007264	CSTF3	100	98.050	Canis_familiaris
ENSMGAG00000001383	CSTF3	99	98.449	ENSCAFG00020002715	CSTF3	99	98.449	Canis_lupus_dingo
ENSMGAG00000001383	CSTF3	99	96.459	ENSCHIG00000016418	CSTF3	100	98.240	Capra_hircus
ENSMGAG00000001383	CSTF3	99	98.166	ENSTSYG00000000451	CSTF3	99	100.000	Carlito_syrichta
ENSMGAG00000001383	CSTF3	84	91.943	ENSCAPG00000010958	CSTF3	98	91.943	Cavia_aperea
ENSMGAG00000001383	CSTF3	100	97.911	ENSCPOG00000005545	CSTF3	100	97.911	Cavia_porcellus
ENSMGAG00000001383	CSTF3	100	98.189	ENSCCAG00000024790	CSTF3	100	98.240	Cebus_capucinus
ENSMGAG00000001383	CSTF3	100	98.189	ENSCATG00000007080	CSTF3	100	98.240	Cercocebus_atys
ENSMGAG00000001383	CSTF3	100	98.189	ENSCLAG00000016179	CSTF3	100	98.189	Chinchilla_lanigera
ENSMGAG00000001383	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSMGAG00000001383	CSTF3	100	98.050	ENSCPBG00000006753	CSTF3	100	98.050	Chrysemys_picta_bellii
ENSMGAG00000001383	CSTF3	99	62.117	ENSCING00000006401	-	98	62.378	Ciona_intestinalis
ENSMGAG00000001383	CSTF3	99	61.806	ENSCSAVG00000004851	-	100	62.064	Ciona_savignyi
ENSMGAG00000001383	CSTF3	100	98.189	ENSCANG00000035468	CSTF3	100	98.240	Colobus_angolensis_palliatus
ENSMGAG00000001383	CSTF3	100	97.493	ENSCGRG00001014773	Cstf3	100	97.493	Cricetulus_griseus_chok1gshd
ENSMGAG00000001383	CSTF3	100	97.493	ENSCGRG00000004142	Cstf3	100	97.493	Cricetulus_griseus_crigri
ENSMGAG00000001383	CSTF3	99	91.139	ENSCSEG00000014283	cstf3	99	91.139	Cynoglossus_semilaevis
ENSMGAG00000001383	CSTF3	100	89.972	ENSCVAG00000019739	cstf3	100	89.972	Cyprinodon_variegatus
ENSMGAG00000001383	CSTF3	99	91.972	ENSDARG00000018904	cstf3	99	91.972	Danio_rerio
ENSMGAG00000001383	CSTF3	99	97.756	ENSDNOG00000007366	CSTF3	99	97.756	Dasypus_novemcinctus
ENSMGAG00000001383	CSTF3	99	90.550	ENSDORG00000005898	Cstf3	99	90.550	Dipodomys_ordii
ENSMGAG00000001383	CSTF3	99	57.084	FBgn0003559	su(f)	98	57.320	Drosophila_melanogaster
ENSMGAG00000001383	CSTF3	90	92.093	ENSETEG00000017097	CSTF3	90	92.523	Echinops_telfairi
ENSMGAG00000001383	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSMGAG00000001383	CSTF3	99	96.897	ENSEASG00005019884	CSTF3	100	98.286	Equus_asinus_asinus
ENSMGAG00000001383	CSTF3	99	96.897	ENSECAG00000023338	CSTF3	100	98.286	Equus_caballus
ENSMGAG00000001383	CSTF3	100	92.618	ENSEEUG00000015167	CSTF3	100	92.618	Erinaceus_europaeus
ENSMGAG00000001383	CSTF3	99	89.902	ENSELUG00000023393	cstf3	99	89.902	Esox_lucius
ENSMGAG00000001383	CSTF3	100	98.050	ENSFCAG00000030711	CSTF3	100	98.050	Felis_catus
ENSMGAG00000001383	CSTF3	93	99.399	ENSFALG00000010764	CSTF3	100	98.464	Ficedula_albicollis
ENSMGAG00000001383	CSTF3	100	98.189	ENSFDAG00000012082	CSTF3	100	98.189	Fukomys_damarensis
ENSMGAG00000001383	CSTF3	100	90.111	ENSFHEG00000020623	cstf3	100	90.111	Fundulus_heteroclitus
ENSMGAG00000001383	CSTF3	100	89.291	ENSGMOG00000012275	cstf3	100	89.291	Gadus_morhua
ENSMGAG00000001383	CSTF3	100	99.861	ENSGALG00000011685	CSTF3	100	99.861	Gallus_gallus
ENSMGAG00000001383	CSTF3	100	90.390	ENSGAFG00000002181	cstf3	100	90.390	Gambusia_affinis
ENSMGAG00000001383	CSTF3	100	90.111	ENSGACG00000015997	cstf3	100	90.111	Gasterosteus_aculeatus
ENSMGAG00000001383	CSTF3	100	97.772	ENSGAGG00000006200	CSTF3	100	97.772	Gopherus_agassizii
ENSMGAG00000001383	CSTF3	99	92.525	ENSGGOG00000026591	CSTF3	99	92.525	Gorilla_gorilla
ENSMGAG00000001383	CSTF3	99	91.243	ENSHBUG00000016656	cstf3	100	90.669	Haplochromis_burtoni
ENSMGAG00000001383	CSTF3	100	97.911	ENSHGLG00000017834	CSTF3	100	97.911	Heterocephalus_glaber_female
ENSMGAG00000001383	CSTF3	100	97.911	ENSHGLG00100018042	CSTF3	100	97.911	Heterocephalus_glaber_male
ENSMGAG00000001383	CSTF3	100	88.301	ENSHCOG00000015218	cstf3	100	88.301	Hippocampus_comes
ENSMGAG00000001383	CSTF3	99	90.678	ENSIPUG00000013170	CSTF3	99	90.678	Ictalurus_punctatus
ENSMGAG00000001383	CSTF3	100	98.189	ENSSTOG00000013306	CSTF3	100	98.189	Ictidomys_tridecemlineatus
ENSMGAG00000001383	CSTF3	99	86.217	ENSJJAG00000018430	Cstf3	99	86.115	Jaculus_jaculus
ENSMGAG00000001383	CSTF3	100	89.276	ENSKMAG00000010916	cstf3	100	89.276	Kryptolebias_marmoratus
ENSMGAG00000001383	CSTF3	100	89.694	ENSLBEG00000002306	cstf3	100	89.694	Labrus_bergylta
ENSMGAG00000001383	CSTF3	100	93.593	ENSLACG00000017296	CSTF3	100	93.593	Latimeria_chalumnae
ENSMGAG00000001383	CSTF3	100	93.175	ENSLOCG00000004415	cstf3	100	93.175	Lepisosteus_oculatus
ENSMGAG00000001383	CSTF3	100	98.050	ENSLAFG00000008712	CSTF3	100	98.050	Loxodonta_africana
ENSMGAG00000001383	CSTF3	100	98.189	ENSMFAG00000029516	CSTF3	100	98.240	Macaca_fascicularis
ENSMGAG00000001383	CSTF3	100	98.189	ENSMMUG00000002542	CSTF3	100	98.189	Macaca_mulatta
ENSMGAG00000001383	CSTF3	100	98.189	ENSMNEG00000021807	CSTF3	100	98.240	Macaca_nemestrina
ENSMGAG00000001383	CSTF3	100	98.189	ENSMLEG00000039594	CSTF3	100	98.240	Mandrillus_leucophaeus
ENSMGAG00000001383	CSTF3	100	90.808	ENSMAMG00000020423	cstf3	100	90.808	Mastacembelus_armatus
ENSMGAG00000001383	CSTF3	99	91.243	ENSMZEG00005012082	cstf3	100	90.669	Maylandia_zebra
ENSMGAG00000001383	CSTF3	100	97.354	ENSMAUG00000002487	Cstf3	100	97.354	Mesocricetus_auratus
ENSMGAG00000001383	CSTF3	100	98.189	ENSMICG00000004784	CSTF3	100	98.240	Microcebus_murinus
ENSMGAG00000001383	CSTF3	100	97.493	ENSMOCG00000017583	Cstf3	100	97.493	Microtus_ochrogaster
ENSMGAG00000001383	CSTF3	99	91.127	ENSMMOG00000016026	cstf3	95	91.127	Mola_mola
ENSMGAG00000001383	CSTF3	100	83.380	ENSMODG00000025205	-	99	83.754	Monodelphis_domestica
ENSMGAG00000001383	CSTF3	100	97.493	ENSMODG00000009745	-	100	97.493	Monodelphis_domestica
ENSMGAG00000001383	CSTF3	100	90.529	ENSMALG00000012050	cstf3	100	90.529	Monopterus_albus
ENSMGAG00000001383	CSTF3	100	97.493	MGP_CAROLIEiJ_G0024026	Cstf3	100	97.493	Mus_caroli
ENSMGAG00000001383	CSTF3	100	97.493	ENSMUSG00000027176	Cstf3	100	97.493	Mus_musculus
ENSMGAG00000001383	CSTF3	100	97.493	MGP_PahariEiJ_G0025464	Cstf3	100	97.493	Mus_pahari
ENSMGAG00000001383	CSTF3	100	97.493	MGP_SPRETEiJ_G0024939	Cstf3	100	97.493	Mus_spretus
ENSMGAG00000001383	CSTF3	100	98.189	ENSMPUG00000011457	CSTF3	100	98.189	Mustela_putorius_furo
ENSMGAG00000001383	CSTF3	99	98.172	ENSMLUG00000003073	-	99	98.172	Myotis_lucifugus
ENSMGAG00000001383	CSTF3	100	95.125	ENSMLUG00000026022	-	100	95.125	Myotis_lucifugus
ENSMGAG00000001383	CSTF3	100	97.493	ENSNGAG00000010677	Cstf3	100	97.493	Nannospalax_galili
ENSMGAG00000001383	CSTF3	88	90.446	ENSNBRG00000007345	cstf3	100	90.880	Neolamprologus_brichardi
ENSMGAG00000001383	CSTF3	100	98.189	ENSNLEG00000017901	CSTF3	100	98.240	Nomascus_leucogenys
ENSMGAG00000001383	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSMGAG00000001383	CSTF3	66	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSMGAG00000001383	CSTF3	89	85.692	ENSODEG00000006311	-	97	85.692	Octodon_degus
ENSMGAG00000001383	CSTF3	100	98.050	ENSODEG00000016737	-	100	98.050	Octodon_degus
ENSMGAG00000001383	CSTF3	99	91.243	ENSONIG00000005563	cstf3	100	90.669	Oreochromis_niloticus
ENSMGAG00000001383	CSTF3	91	96.631	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSMGAG00000001383	CSTF3	100	98.050	ENSOCUG00000015417	CSTF3	100	98.050	Oryctolagus_cuniculus
ENSMGAG00000001383	CSTF3	99	90.743	ENSORLG00000009762	cstf3	99	90.743	Oryzias_latipes
ENSMGAG00000001383	CSTF3	99	90.743	ENSORLG00020005540	cstf3	99	90.743	Oryzias_latipes_hni
ENSMGAG00000001383	CSTF3	99	90.603	ENSORLG00015003551	cstf3	99	90.603	Oryzias_latipes_hsok
ENSMGAG00000001383	CSTF3	100	89.554	ENSOMEG00000003848	cstf3	100	89.554	Oryzias_melastigma
ENSMGAG00000001383	CSTF3	100	97.781	ENSOGAG00000010229	CSTF3	100	97.781	Otolemur_garnettii
ENSMGAG00000001383	CSTF3	90	98.134	ENSOARG00000017271	CSTF3	99	98.134	Ovis_aries
ENSMGAG00000001383	CSTF3	99	94.922	ENSPPAG00000027358	CSTF3	99	94.922	Pan_paniscus
ENSMGAG00000001383	CSTF3	100	98.050	ENSPPRG00000016852	CSTF3	100	98.050	Panthera_pardus
ENSMGAG00000001383	CSTF3	100	98.050	ENSPTIG00000008716	CSTF3	100	98.050	Panthera_tigris_altaica
ENSMGAG00000001383	CSTF3	100	98.189	ENSPTRG00000003485	CSTF3	100	98.189	Pan_troglodytes
ENSMGAG00000001383	CSTF3	100	98.189	ENSPANG00000013722	CSTF3	100	98.189	Papio_anubis
ENSMGAG00000001383	CSTF3	100	91.922	ENSPKIG00000023648	cstf3	100	91.922	Paramormyrops_kingsleyae
ENSMGAG00000001383	CSTF3	100	97.632	ENSPSIG00000009173	CSTF3	100	97.632	Pelodiscus_sinensis
ENSMGAG00000001383	CSTF3	76	95.028	ENSPMGG00000000164	cstf3	99	95.028	Periophthalmus_magnuspinnatus
ENSMGAG00000001383	CSTF3	100	97.354	ENSPEMG00000011481	Cstf3	100	97.354	Peromyscus_maniculatus_bairdii
ENSMGAG00000001383	CSTF3	100	79.722	ENSPMAG00000007282	cstf3	100	79.750	Petromyzon_marinus
ENSMGAG00000001383	CSTF3	99	95.205	ENSPCIG00000026406	-	100	97.280	Phascolarctos_cinereus
ENSMGAG00000001383	CSTF3	100	80.668	ENSPCIG00000030419	-	90	81.085	Phascolarctos_cinereus
ENSMGAG00000001383	CSTF3	100	90.529	ENSPFOG00000017239	cstf3	100	90.529	Poecilia_formosa
ENSMGAG00000001383	CSTF3	100	90.529	ENSPLAG00000009456	cstf3	100	90.529	Poecilia_latipinna
ENSMGAG00000001383	CSTF3	100	90.529	ENSPMEG00000010320	cstf3	100	90.529	Poecilia_mexicana
ENSMGAG00000001383	CSTF3	100	90.529	ENSPREG00000013549	cstf3	100	90.529	Poecilia_reticulata
ENSMGAG00000001383	CSTF3	100	98.189	ENSPPYG00000003375	CSTF3	100	98.189	Pongo_abelii
ENSMGAG00000001383	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSMGAG00000001383	CSTF3	100	93.036	ENSPCOG00000014417	CSTF3	100	93.036	Propithecus_coquereli
ENSMGAG00000001383	CSTF3	100	92.758	ENSPVAG00000002350	CSTF3	100	92.758	Pteropus_vampyrus
ENSMGAG00000001383	CSTF3	99	91.243	ENSPNYG00000018259	cstf3	100	90.669	Pundamilia_nyererei
ENSMGAG00000001383	CSTF3	100	91.643	ENSPNAG00000020182	cstf3	100	91.643	Pygocentrus_nattereri
ENSMGAG00000001383	CSTF3	88	96.975	ENSRNOG00000012089	Cstf3	100	97.440	Rattus_norvegicus
ENSMGAG00000001383	CSTF3	99	97.038	ENSRBIG00000044258	CSTF3	100	98.240	Rhinopithecus_bieti
ENSMGAG00000001383	CSTF3	100	98.189	ENSRROG00000043450	CSTF3	100	98.240	Rhinopithecus_roxellana
ENSMGAG00000001383	CSTF3	100	98.189	ENSSBOG00000024764	CSTF3	100	98.240	Saimiri_boliviensis_boliviensis
ENSMGAG00000001383	CSTF3	100	84.958	ENSSHAG00000003135	-	99	84.958	Sarcophilus_harrisii
ENSMGAG00000001383	CSTF3	100	96.648	ENSSHAG00000018128	-	99	96.788	Sarcophilus_harrisii
ENSMGAG00000001383	CSTF3	100	92.039	ENSSFOG00015022133	cstf3	99	92.707	Scleropages_formosus
ENSMGAG00000001383	CSTF3	100	90.111	ENSSMAG00000002197	cstf3	100	90.111	Scophthalmus_maximus
ENSMGAG00000001383	CSTF3	100	90.947	ENSSDUG00000020426	cstf3	100	90.947	Seriola_dumerili
ENSMGAG00000001383	CSTF3	100	90.947	ENSSLDG00000025649	cstf3	100	90.947	Seriola_lalandi_dorsalis
ENSMGAG00000001383	CSTF3	100	98.050	ENSSARG00000000391	CSTF3	100	98.050	Sorex_araneus
ENSMGAG00000001383	CSTF3	97	97.550	ENSSPUG00000010546	CSTF3	100	97.974	Sphenodon_punctatus
ENSMGAG00000001383	CSTF3	100	90.808	ENSSPAG00000004958	cstf3	100	90.808	Stegastes_partitus
ENSMGAG00000001383	CSTF3	99	97.890	ENSSSCG00000040954	CSTF3	100	97.629	Sus_scrofa
ENSMGAG00000001383	CSTF3	99	99.153	ENSTGUG00000005010	CSTF3	100	99.153	Taeniopygia_guttata
ENSMGAG00000001383	CSTF3	100	89.415	ENSTRUG00000004959	cstf3	100	89.415	Takifugu_rubripes
ENSMGAG00000001383	CSTF3	99	90.563	ENSTNIG00000013811	cstf3	99	90.563	Tetraodon_nigroviridis
ENSMGAG00000001383	CSTF3	90	94.574	ENSTBEG00000001544	CSTF3	90	95.016	Tupaia_belangeri
ENSMGAG00000001383	CSTF3	100	95.404	ENSTTRG00000016366	CSTF3	100	95.404	Tursiops_truncatus
ENSMGAG00000001383	CSTF3	99	98.449	ENSUMAG00000018971	CSTF3	100	98.240	Ursus_maritimus
ENSMGAG00000001383	CSTF3	100	98.050	ENSVPAG00000007800	CSTF3	100	98.050	Vicugna_pacos
ENSMGAG00000001383	CSTF3	99	98.449	ENSVVUG00000014938	CSTF3	100	98.240	Vulpes_vulpes
ENSMGAG00000001383	CSTF3	89	79.471	ENSXETG00000021399	cstf3	100	81.068	Xenopus_tropicalis
ENSMGAG00000001383	CSTF3	66	43.776	ENSXETG00000017946	-	99	43.776	Xenopus_tropicalis
ENSMGAG00000001383	CSTF3	88	89.968	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSMGAG00000001383	CSTF3	100	90.529	ENSXMAG00000009545	cstf3	100	90.529	Xiphophorus_maculatus