EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000001507 (Gene tree)
Gene ID: 100540486
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 20171 bases
Position: chr8:4243719-4263889
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000000973	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSMGAP00000000973	RRM_1	PF00076.22	2.8e-38	1	3
ENSMGAP00000000973	RRM_1	PF00076.22	2.8e-38	2	3
ENSMGAP00000000973	RRM_1	PF00076.22	2.8e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000001621	A1CF-201	1773	-	ENSMGAP00000000973	590 (aa)	-	G1MRW2

Gene Model

Click here to download ENSMGAG00000001507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000001507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000001507	A1CF	75	58.628	ENSMGAG00000012226	RBM47	72	58.850
ENSMGAG00000001507	A1CF	67	69.360	ENSMGAG00000001457	RBM46	96	69.360
ENSMGAG00000001507	A1CF	50	35.906	ENSMGAG00000000896	DND1	76	35.906
ENSMGAG00000001507	A1CF	52	51.935	ENSMGAG00000013690	SYNCRIP	51	50.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000001507	A1CF	100	87.919	ENSG00000148584	A1CF	100	94.059	Homo_sapiens
ENSMGAG00000001507	A1CF	100	72.924	ENSAPOG00000008259	a1cf	100	73.090	Acanthochromis_polyacanthus
ENSMGAG00000001507	A1CF	100	87.710	ENSAMEG00000000523	A1CF	100	88.384	Ailuropoda_melanoleuca
ENSMGAG00000001507	A1CF	100	74.756	ENSACIG00000008632	a1cf	100	76.059	Amphilophus_citrinellus
ENSMGAG00000001507	A1CF	100	73.770	ENSAOCG00000023744	a1cf	91	86.364	Amphiprion_ocellaris
ENSMGAG00000001507	A1CF	100	74.754	ENSAPEG00000009537	a1cf	100	75.410	Amphiprion_percula
ENSMGAG00000001507	A1CF	100	75.122	ENSATEG00000013720	a1cf	100	76.423	Anabas_testudineus
ENSMGAG00000001507	A1CF	100	96.441	ENSAPLG00000002964	A1CF	100	96.441	Anas_platyrhynchos
ENSMGAG00000001507	A1CF	100	86.971	ENSACAG00000015269	A1CF	100	86.971	Anolis_carolinensis
ENSMGAG00000001507	A1CF	100	86.745	ENSANAG00000019974	A1CF	100	86.745	Aotus_nancymaae
ENSMGAG00000001507	A1CF	100	74.135	ENSACLG00000017428	a1cf	100	75.618	Astatotilapia_calliptera
ENSMGAG00000001507	A1CF	100	74.752	ENSAMXG00000018180	a1cf	100	74.752	Astyanax_mexicanus
ENSMGAG00000001507	A1CF	100	87.102	ENSBTAG00000021195	A1CF	100	89.234	Bos_taurus
ENSMGAG00000001507	A1CF	100	88.423	ENSCJAG00000005045	A1CF	100	88.423	Callithrix_jacchus
ENSMGAG00000001507	A1CF	100	88.702	ENSCAFG00000015581	A1CF	100	89.039	Canis_familiaris
ENSMGAG00000001507	A1CF	100	88.702	ENSCAFG00020026421	A1CF	100	89.039	Canis_lupus_dingo
ENSMGAG00000001507	A1CF	100	88.275	ENSCHIG00000020411	A1CF	100	88.275	Capra_hircus
ENSMGAG00000001507	A1CF	97	85.324	ENSTSYG00000001755	A1CF	100	87.344	Carlito_syrichta
ENSMGAG00000001507	A1CF	100	78.899	ENSCAPG00000017386	A1CF	100	79.077	Cavia_aperea
ENSMGAG00000001507	A1CF	100	87.416	ENSCPOG00000009807	A1CF	100	87.919	Cavia_porcellus
ENSMGAG00000001507	A1CF	100	88.571	ENSCCAG00000018168	A1CF	100	88.571	Cebus_capucinus
ENSMGAG00000001507	A1CF	100	87.374	ENSCATG00000043715	A1CF	100	87.374	Cercocebus_atys
ENSMGAG00000001507	A1CF	100	87.960	ENSCLAG00000010424	A1CF	100	87.960	Chinchilla_lanigera
ENSMGAG00000001507	A1CF	100	89.057	ENSCSAG00000007032	A1CF	100	89.057	Chlorocebus_sabaeus
ENSMGAG00000001507	A1CF	98	83.193	ENSCHOG00000009089	A1CF	99	83.697	Choloepus_hoffmanni
ENSMGAG00000001507	A1CF	100	92.724	ENSCPBG00000026464	A1CF	100	92.724	Chrysemys_picta_bellii
ENSMGAG00000001507	A1CF	100	88.889	ENSCANG00000038032	A1CF	100	88.889	Colobus_angolensis_palliatus
ENSMGAG00000001507	A1CF	100	86.265	ENSCGRG00001017413	A1cf	100	86.265	Cricetulus_griseus_chok1gshd
ENSMGAG00000001507	A1CF	100	85.595	ENSCGRG00000017332	A1cf	100	85.930	Cricetulus_griseus_crigri
ENSMGAG00000001507	A1CF	100	74.507	ENSCSEG00000002361	a1cf	100	76.490	Cynoglossus_semilaevis
ENSMGAG00000001507	A1CF	100	73.659	ENSCVAG00000010520	a1cf	100	75.285	Cyprinodon_variegatus
ENSMGAG00000001507	A1CF	100	78.130	ENSDARG00000002968	a1cf	100	79.633	Danio_rerio
ENSMGAG00000001507	A1CF	100	86.935	ENSDNOG00000002829	A1CF	100	87.437	Dasypus_novemcinctus
ENSMGAG00000001507	A1CF	81	90.253	ENSETEG00000012527	A1CF	81	90.253	Echinops_telfairi
ENSMGAG00000001507	A1CF	100	88.648	ENSEASG00005012924	A1CF	100	88.815	Equus_asinus_asinus
ENSMGAG00000001507	A1CF	100	88.314	ENSECAG00000010424	A1CF	100	88.481	Equus_caballus
ENSMGAG00000001507	A1CF	78	76.068	ENSEEUG00000000013	A1CF	100	76.068	Erinaceus_europaeus
ENSMGAG00000001507	A1CF	100	79.195	ENSELUG00000003159	a1cf	100	80.201	Esox_lucius
ENSMGAG00000001507	A1CF	100	86.700	ENSFCAG00000011179	A1CF	100	87.037	Felis_catus
ENSMGAG00000001507	A1CF	100	93.390	ENSFALG00000013183	A1CF	100	93.390	Ficedula_albicollis
ENSMGAG00000001507	A1CF	100	85.930	ENSFDAG00000019371	A1CF	100	86.097	Fukomys_damarensis
ENSMGAG00000001507	A1CF	100	67.690	ENSFHEG00000019652	a1cf	96	85.156	Fundulus_heteroclitus
ENSMGAG00000001507	A1CF	100	70.627	ENSGMOG00000018943	a1cf	100	70.462	Gadus_morhua
ENSMGAG00000001507	A1CF	95	98.927	ENSGALG00000003765	A1CF	97	98.927	Gallus_gallus
ENSMGAG00000001507	A1CF	100	70.115	ENSGAFG00000014868	a1cf	100	70.279	Gambusia_affinis
ENSMGAG00000001507	A1CF	100	73.279	ENSGACG00000010241	a1cf	100	73.934	Gasterosteus_aculeatus
ENSMGAG00000001507	A1CF	94	92.832	ENSGAGG00000016508	A1CF	97	92.832	Gopherus_agassizii
ENSMGAG00000001507	A1CF	100	88.087	ENSGGOG00000009670	A1CF	100	88.255	Gorilla_gorilla
ENSMGAG00000001507	A1CF	100	74.919	ENSHBUG00000021959	a1cf	100	76.710	Haplochromis_burtoni
ENSMGAG00000001507	A1CF	100	87.940	ENSHGLG00000008955	A1CF	100	87.940	Heterocephalus_glaber_female
ENSMGAG00000001507	A1CF	100	87.270	ENSHGLG00100000518	A1CF	100	87.270	Heterocephalus_glaber_male
ENSMGAG00000001507	A1CF	95	72.117	ENSHCOG00000017669	a1cf	100	73.127	Hippocampus_comes
ENSMGAG00000001507	A1CF	90	82.900	ENSIPUG00000010367	a1cf	97	82.537	Ictalurus_punctatus
ENSMGAG00000001507	A1CF	100	76.299	ENSKMAG00000006568	a1cf	100	76.948	Kryptolebias_marmoratus
ENSMGAG00000001507	A1CF	99	74.673	ENSLBEG00000020994	a1cf	99	76.307	Labrus_bergylta
ENSMGAG00000001507	A1CF	100	82.828	ENSLACG00000008061	A1CF	100	82.828	Latimeria_chalumnae
ENSMGAG00000001507	A1CF	100	84.034	ENSLOCG00000006302	a1cf	100	84.034	Lepisosteus_oculatus
ENSMGAG00000001507	A1CF	100	87.772	ENSLAFG00000015462	A1CF	100	88.107	Loxodonta_africana
ENSMGAG00000001507	A1CF	100	87.710	ENSMFAG00000035948	A1CF	100	87.710	Macaca_fascicularis
ENSMGAG00000001507	A1CF	100	87.710	ENSMMUG00000007077	A1CF	100	87.710	Macaca_mulatta
ENSMGAG00000001507	A1CF	100	87.374	ENSMNEG00000031454	A1CF	100	87.374	Macaca_nemestrina
ENSMGAG00000001507	A1CF	100	88.721	ENSMLEG00000037223	A1CF	100	88.721	Mandrillus_leucophaeus
ENSMGAG00000001507	A1CF	100	73.529	ENSMAMG00000010402	a1cf	100	75.163	Mastacembelus_armatus
ENSMGAG00000001507	A1CF	100	77.554	ENSMZEG00005013245	a1cf	100	78.559	Maylandia_zebra
ENSMGAG00000001507	A1CF	100	85.595	ENSMAUG00000007422	A1cf	100	85.930	Mesocricetus_auratus
ENSMGAG00000001507	A1CF	100	85.667	ENSMICG00000003377	A1CF	100	85.833	Microcebus_murinus
ENSMGAG00000001507	A1CF	100	86.265	ENSMOCG00000021536	A1cf	100	86.432	Microtus_ochrogaster
ENSMGAG00000001507	A1CF	100	66.446	ENSMMOG00000009422	a1cf	100	68.430	Mola_mola
ENSMGAG00000001507	A1CF	92	87.546	ENSMODG00000016478	A1CF	99	87.729	Monodelphis_domestica
ENSMGAG00000001507	A1CF	100	72.987	ENSMALG00000012992	a1cf	100	72.987	Monopterus_albus
ENSMGAG00000001507	A1CF	100	85.427	MGP_CAROLIEiJ_G0022873	A1cf	100	85.595	Mus_caroli
ENSMGAG00000001507	A1CF	100	85.427	ENSMUSG00000052595	A1cf	99	90.289	Mus_musculus
ENSMGAG00000001507	A1CF	100	84.925	MGP_PahariEiJ_G0014366	A1cf	100	84.925	Mus_pahari
ENSMGAG00000001507	A1CF	100	85.260	MGP_SPRETEiJ_G0023792	A1cf	100	85.427	Mus_spretus
ENSMGAG00000001507	A1CF	100	81.818	ENSMPUG00000016971	A1CF	100	82.492	Mustela_putorius_furo
ENSMGAG00000001507	A1CF	100	86.935	ENSMLUG00000016071	A1CF	100	87.270	Myotis_lucifugus
ENSMGAG00000001507	A1CF	100	86.767	ENSNGAG00000015136	A1cf	100	87.437	Nannospalax_galili
ENSMGAG00000001507	A1CF	100	74.919	ENSNBRG00000001712	a1cf	100	76.710	Neolamprologus_brichardi
ENSMGAG00000001507	A1CF	100	88.442	ENSNLEG00000012028	A1CF	100	88.610	Nomascus_leucogenys
ENSMGAG00000001507	A1CF	94	88.014	ENSMEUG00000015909	A1CF	100	88.014	Notamacropus_eugenii
ENSMGAG00000001507	A1CF	89	79.317	ENSOPRG00000010667	A1CF	97	78.799	Ochotona_princeps
ENSMGAG00000001507	A1CF	100	75.733	ENSONIG00000019105	a1cf	100	76.873	Oreochromis_niloticus
ENSMGAG00000001507	A1CF	79	86.752	ENSOANG00000007360	A1CF	99	86.752	Ornithorhynchus_anatinus
ENSMGAG00000001507	A1CF	100	85.452	ENSOCUG00000011587	A1CF	100	85.786	Oryctolagus_cuniculus
ENSMGAG00000001507	A1CF	100	75.618	ENSORLG00000013342	a1cf	100	75.618	Oryzias_latipes
ENSMGAG00000001507	A1CF	100	75.980	ENSORLG00020000586	a1cf	100	76.471	Oryzias_latipes_hni
ENSMGAG00000001507	A1CF	100	75.980	ENSORLG00015018569	a1cf	100	76.471	Oryzias_latipes_hsok
ENSMGAG00000001507	A1CF	100	75.163	ENSOMEG00000013531	a1cf	100	75.163	Oryzias_melastigma
ENSMGAG00000001507	A1CF	100	87.374	ENSOGAG00000012884	A1CF	100	87.710	Otolemur_garnettii
ENSMGAG00000001507	A1CF	100	88.442	ENSOARG00000013695	A1CF	100	88.442	Ovis_aries
ENSMGAG00000001507	A1CF	97	86.678	ENSPPAG00000028115	A1CF	99	91.919	Pan_paniscus
ENSMGAG00000001507	A1CF	100	88.384	ENSPPRG00000012180	A1CF	100	88.721	Panthera_pardus
ENSMGAG00000001507	A1CF	100	88.384	ENSPTIG00000021223	A1CF	100	88.721	Panthera_tigris_altaica
ENSMGAG00000001507	A1CF	100	88.255	ENSPTRG00000002508	A1CF	100	88.423	Pan_troglodytes
ENSMGAG00000001507	A1CF	100	87.710	ENSPANG00000021988	A1CF	100	87.710	Papio_anubis
ENSMGAG00000001507	A1CF	100	80.936	ENSPKIG00000025176	a1cf	100	81.104	Paramormyrops_kingsleyae
ENSMGAG00000001507	A1CF	100	90.863	ENSPSIG00000010318	A1CF	100	90.863	Pelodiscus_sinensis
ENSMGAG00000001507	A1CF	98	66.437	ENSPMGG00000013359	a1cf	99	67.350	Periophthalmus_magnuspinnatus
ENSMGAG00000001507	A1CF	100	87.270	ENSPEMG00000015021	A1cf	100	87.270	Peromyscus_maniculatus_bairdii
ENSMGAG00000001507	A1CF	100	87.500	ENSPCIG00000002175	A1CF	100	87.500	Phascolarctos_cinereus
ENSMGAG00000001507	A1CF	100	75.285	ENSPFOG00000006683	a1cf	100	76.911	Poecilia_formosa
ENSMGAG00000001507	A1CF	100	75.122	ENSPFOG00000007437	-	100	76.748	Poecilia_formosa
ENSMGAG00000001507	A1CF	100	73.984	ENSPLAG00000001210	-	100	75.610	Poecilia_latipinna
ENSMGAG00000001507	A1CF	100	73.984	ENSPLAG00000000026	a1cf	100	75.610	Poecilia_latipinna
ENSMGAG00000001507	A1CF	100	67.047	ENSPMEG00000000921	a1cf	100	68.679	Poecilia_mexicana
ENSMGAG00000001507	A1CF	100	68.189	ENSPMEG00000015529	-	100	69.821	Poecilia_mexicana
ENSMGAG00000001507	A1CF	100	75.285	ENSPREG00000016298	a1cf	100	76.748	Poecilia_reticulata
ENSMGAG00000001507	A1CF	100	87.270	ENSPPYG00000002819	A1CF	100	87.437	Pongo_abelii
ENSMGAG00000001507	A1CF	71	77.480	ENSPCAG00000006463	A1CF	68	80.556	Procavia_capensis
ENSMGAG00000001507	A1CF	100	87.124	ENSPCOG00000024172	A1CF	100	87.458	Propithecus_coquereli
ENSMGAG00000001507	A1CF	100	76.221	ENSPNYG00000017944	a1cf	100	78.013	Pundamilia_nyererei
ENSMGAG00000001507	A1CF	100	79.008	ENSPNAG00000007704	a1cf	100	79.174	Pygocentrus_nattereri
ENSMGAG00000001507	A1CF	100	84.757	ENSRNOG00000033195	A1cf	100	84.925	Rattus_norvegicus
ENSMGAG00000001507	A1CF	100	82.718	ENSRBIG00000042892	A1CF	100	85.882	Rhinopithecus_bieti
ENSMGAG00000001507	A1CF	100	89.057	ENSRROG00000041398	A1CF	100	89.057	Rhinopithecus_roxellana
ENSMGAG00000001507	A1CF	100	88.610	ENSSBOG00000021930	A1CF	100	88.610	Saimiri_boliviensis_boliviensis
ENSMGAG00000001507	A1CF	100	89.226	ENSSHAG00000005096	A1CF	100	89.226	Sarcophilus_harrisii
ENSMGAG00000001507	A1CF	100	79.305	ENSSFOG00015011774	a1cf	100	79.636	Scleropages_formosus
ENSMGAG00000001507	A1CF	100	74.797	ENSSMAG00000013271	a1cf	100	75.772	Scophthalmus_maximus
ENSMGAG00000001507	A1CF	100	75.041	ENSSDUG00000013930	a1cf	100	76.033	Seriola_dumerili
ENSMGAG00000001507	A1CF	100	69.243	ENSSLDG00000004290	a1cf	100	69.408	Seriola_lalandi_dorsalis
ENSMGAG00000001507	A1CF	95	76.937	ENSSARG00000005940	A1CF	96	77.113	Sorex_araneus
ENSMGAG00000001507	A1CF	95	90.231	ENSSPUG00000006797	A1CF	95	89.876	Sphenodon_punctatus
ENSMGAG00000001507	A1CF	100	88.107	ENSSSCG00000010431	A1CF	100	88.275	Sus_scrofa
ENSMGAG00000001507	A1CF	100	93.311	ENSTGUG00000005090	A1CF	100	93.311	Taeniopygia_guttata
ENSMGAG00000001507	A1CF	100	74.430	ENSTRUG00000001982	a1cf	100	74.430	Takifugu_rubripes
ENSMGAG00000001507	A1CF	100	75.162	ENSTNIG00000003580	a1cf	100	75.487	Tetraodon_nigroviridis
ENSMGAG00000001507	A1CF	97	80.829	ENSTTRG00000013190	A1CF	95	81.002	Tursiops_truncatus
ENSMGAG00000001507	A1CF	100	86.532	ENSUAMG00000020065	A1CF	100	86.869	Ursus_americanus
ENSMGAG00000001507	A1CF	100	88.007	ENSUMAG00000011162	A1CF	100	88.345	Ursus_maritimus
ENSMGAG00000001507	A1CF	87	83.939	ENSVPAG00000006130	A1CF	86	83.939	Vicugna_pacos
ENSMGAG00000001507	A1CF	100	87.690	ENSVVUG00000002504	A1CF	99	89.687	Vulpes_vulpes
ENSMGAG00000001507	A1CF	100	80.000	ENSXETG00000006611	a1cf	100	80.000	Xenopus_tropicalis
ENSMGAG00000001507	A1CF	100	75.123	ENSXCOG00000003302	a1cf	100	76.268	Xiphophorus_couchianus
ENSMGAG00000001507	A1CF	100	76.268	ENSXMAG00000016703	a1cf	100	77.414	Xiphophorus_maculatus