EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000001561 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 27273 bases
Position: chr10:2896898-2924170
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000001112	EST1	PF10374.9	4.1e-25	1	1
ENSMGAP00000001112	EST1_DNA_bind	PF10373.9	9.4e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000001763	SMG7-201	3405	-	ENSMGAP00000001112	1135 (aa)	-	G1MS66

Gene Model

Click here to download ENSMGAG00000001561's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000001561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000001561	SMG7	98	89.039	ENSG00000116698	SMG7	97	89.218	Homo_sapiens
ENSMGAG00000001561	SMG7	88	74.887	ENSAPOG00000009611	smg7	93	74.887	Acanthochromis_polyacanthus
ENSMGAG00000001561	SMG7	98	88.420	ENSAMEG00000002357	SMG7	97	88.510	Ailuropoda_melanoleuca
ENSMGAG00000001561	SMG7	97	64.228	ENSACIG00000015152	smg7	99	64.228	Amphilophus_citrinellus
ENSMGAG00000001561	SMG7	99	65.893	ENSAOCG00000013538	smg7	99	66.295	Amphiprion_ocellaris
ENSMGAG00000001561	SMG7	99	65.749	ENSAPEG00000007851	smg7	99	66.151	Amphiprion_percula
ENSMGAG00000001561	SMG7	99	64.962	ENSATEG00000006931	smg7	99	65.210	Anabas_testudineus
ENSMGAG00000001561	SMG7	99	98.051	ENSAPLG00000015811	SMG7	99	98.051	Anas_platyrhynchos
ENSMGAG00000001561	SMG7	99	84.570	ENSACAG00000014989	SMG7	99	85.076	Anolis_carolinensis
ENSMGAG00000001561	SMG7	98	89.388	ENSANAG00000028114	SMG7	97	89.568	Aotus_nancymaae
ENSMGAG00000001561	SMG7	99	65.259	ENSACLG00000022079	smg7	99	64.680	Astatotilapia_calliptera
ENSMGAG00000001561	SMG7	99	68.472	ENSAMXG00000020809	smg7	97	66.960	Astyanax_mexicanus
ENSMGAG00000001561	SMG7	99	88.074	ENSBTAG00000008003	SMG7	99	88.251	Bos_taurus
ENSMGAG00000001561	SMG7	98	89.119	ENSCJAG00000005135	SMG7	97	88.669	Callithrix_jacchus
ENSMGAG00000001561	SMG7	98	81.577	ENSCAFG00000013276	SMG7	95	81.320	Canis_familiaris
ENSMGAG00000001561	SMG7	98	88.510	ENSCAFG00020015475	SMG7	97	88.241	Canis_lupus_dingo
ENSMGAG00000001561	SMG7	99	81.319	ENSCHIG00000018192	SMG7	99	81.403	Capra_hircus
ENSMGAG00000001561	SMG7	98	88.859	ENSTSYG00000002667	SMG7	97	88.859	Carlito_syrichta
ENSMGAG00000001561	SMG7	98	81.320	ENSCPOG00000008906	SMG7	98	80.567	Cavia_porcellus
ENSMGAG00000001561	SMG7	98	89.209	ENSCCAG00000028596	SMG7	97	89.388	Cebus_capucinus
ENSMGAG00000001561	SMG7	98	89.128	ENSCATG00000011063	SMG7	97	89.308	Cercocebus_atys
ENSMGAG00000001561	SMG7	98	88.230	ENSCLAG00000010751	SMG7	97	88.230	Chinchilla_lanigera
ENSMGAG00000001561	SMG7	98	81.748	ENSCSAG00000012654	SMG7	95	81.919	Chlorocebus_sabaeus
ENSMGAG00000001561	SMG7	92	77.707	ENSCHOG00000010522	SMG7	93	78.162	Choloepus_hoffmanni
ENSMGAG00000001561	SMG7	98	93.165	ENSCPBG00000015724	SMG7	97	93.165	Chrysemys_picta_bellii
ENSMGAG00000001561	SMG7	98	89.039	ENSCANG00000015680	SMG7	97	89.218	Colobus_angolensis_palliatus
ENSMGAG00000001561	SMG7	99	87.633	ENSCGRG00001013705	Smg7	99	87.633	Cricetulus_griseus_chok1gshd
ENSMGAG00000001561	SMG7	99	87.622	ENSCGRG00000018401	Smg7	99	87.622	Cricetulus_griseus_crigri
ENSMGAG00000001561	SMG7	99	63.036	ENSCVAG00000011842	smg7	99	63.293	Cyprinodon_variegatus
ENSMGAG00000001561	SMG7	99	67.537	ENSDARG00000060767	smg7	97	66.607	Danio_rerio
ENSMGAG00000001561	SMG7	98	80.997	ENSDORG00000007331	Smg7	97	81.169	Dipodomys_ordii
ENSMGAG00000001561	SMG7	96	81.343	ENSETEG00000002654	SMG7	99	81.343	Echinops_telfairi
ENSMGAG00000001561	SMG7	98	82.029	ENSEASG00005006524	SMG7	97	82.201	Equus_asinus_asinus
ENSMGAG00000001561	SMG7	92	97.305	ENSECAG00000004313	SMG7	95	97.305	Equus_caballus
ENSMGAG00000001561	SMG7	95	81.426	ENSEEUG00000002024	SMG7	92	81.250	Erinaceus_europaeus
ENSMGAG00000001561	SMG7	92	71.802	ENSELUG00000010293	smg7	98	66.371	Esox_lucius
ENSMGAG00000001561	SMG7	99	86.092	ENSFCAG00000010900	SMG7	99	85.569	Felis_catus
ENSMGAG00000001561	SMG7	99	88.993	ENSFALG00000003047	SMG7	99	88.993	Ficedula_albicollis
ENSMGAG00000001561	SMG7	98	81.153	ENSFDAG00000012121	SMG7	97	81.093	Fukomys_damarensis
ENSMGAG00000001561	SMG7	99	63.652	ENSFHEG00000011073	smg7	99	63.417	Fundulus_heteroclitus
ENSMGAG00000001561	SMG7	72	74.046	ENSGMOG00000004916	smg7	74	74.046	Gadus_morhua
ENSMGAG00000001561	SMG7	99	99.381	ENSGALG00000004667	SMG7	99	99.381	Gallus_gallus
ENSMGAG00000001561	SMG7	99	63.934	ENSGAFG00000019000	smg7	99	62.199	Gambusia_affinis
ENSMGAG00000001561	SMG7	97	63.149	ENSGACG00000001634	smg7	99	62.973	Gasterosteus_aculeatus
ENSMGAG00000001561	SMG7	98	89.128	ENSGGOG00000002342	SMG7	97	89.308	Gorilla_gorilla
ENSMGAG00000001561	SMG7	99	64.304	ENSHBUG00000003726	smg7	99	63.580	Haplochromis_burtoni
ENSMGAG00000001561	SMG7	98	88.230	ENSHGLG00000009353	SMG7	97	88.410	Heterocephalus_glaber_female
ENSMGAG00000001561	SMG7	98	88.230	ENSHGLG00100009637	-	97	88.410	Heterocephalus_glaber_male
ENSMGAG00000001561	SMG7	99	74.704	ENSHGLG00100004878	-	97	74.721	Heterocephalus_glaber_male
ENSMGAG00000001561	SMG7	99	68.739	ENSIPUG00000016997	smg7	97	68.004	Ictalurus_punctatus
ENSMGAG00000001561	SMG7	98	86.074	ENSSTOG00000000401	SMG7	97	86.074	Ictidomys_tridecemlineatus
ENSMGAG00000001561	SMG7	99	81.033	ENSJJAG00000012351	Smg7	99	81.033	Jaculus_jaculus
ENSMGAG00000001561	SMG7	97	61.228	ENSKMAG00000004900	smg7	99	61.194	Kryptolebias_marmoratus
ENSMGAG00000001561	SMG7	53	61.526	ENSLBEG00000005220	-	75	61.526	Labrus_bergylta
ENSMGAG00000001561	SMG7	99	65.022	ENSLBEG00000002983	smg7	97	64.179	Labrus_bergylta
ENSMGAG00000001561	SMG7	99	75.065	ENSLACG00000000972	SMG7	99	75.000	Latimeria_chalumnae
ENSMGAG00000001561	SMG7	99	68.254	ENSLOCG00000002010	smg7	76	69.438	Lepisosteus_oculatus
ENSMGAG00000001561	SMG7	98	81.857	ENSLAFG00000008186	SMG7	97	82.029	Loxodonta_africana
ENSMGAG00000001561	SMG7	98	85.497	ENSMFAG00000031653	SMG7	98	84.956	Macaca_fascicularis
ENSMGAG00000001561	SMG7	97	88.548	ENSMMUG00000018458	SMG7	97	88.729	Macaca_mulatta
ENSMGAG00000001561	SMG7	98	89.128	ENSMNEG00000034798	SMG7	97	89.308	Macaca_nemestrina
ENSMGAG00000001561	SMG7	98	89.128	ENSMLEG00000037170	SMG7	97	89.308	Mandrillus_leucophaeus
ENSMGAG00000001561	SMG7	87	64.175	ENSMAMG00000018733	smg7	84	63.716	Mastacembelus_armatus
ENSMGAG00000001561	SMG7	99	65.120	ENSMZEG00005015247	smg7	99	64.594	Maylandia_zebra
ENSMGAG00000001561	SMG7	99	87.544	ENSMAUG00000019484	Smg7	99	87.721	Mesocricetus_auratus
ENSMGAG00000001561	SMG7	98	89.488	ENSMICG00000007145	SMG7	97	89.039	Microcebus_murinus
ENSMGAG00000001561	SMG7	99	87.456	ENSMOCG00000020748	Smg7	99	87.633	Microtus_ochrogaster
ENSMGAG00000001561	SMG7	99	63.715	ENSMMOG00000001524	smg7	99	63.755	Mola_mola
ENSMGAG00000001561	SMG7	92	89.207	ENSMODG00000007139	SMG7	99	89.207	Monodelphis_domestica
ENSMGAG00000001561	SMG7	99	64.574	ENSMALG00000000061	smg7	91	64.948	Monopterus_albus
ENSMGAG00000001561	SMG7	99	87.633	MGP_CAROLIEiJ_G0014704	Smg7	99	87.367	Mus_caroli
ENSMGAG00000001561	SMG7	99	87.544	ENSMUSG00000042772	Smg7	99	87.721	Mus_musculus
ENSMGAG00000001561	SMG7	99	87.367	MGP_PahariEiJ_G0027940	Smg7	99	87.544	Mus_pahari
ENSMGAG00000001561	SMG7	99	87.633	MGP_SPRETEiJ_G0015511	Smg7	99	87.809	Mus_spretus
ENSMGAG00000001561	SMG7	97	81.873	ENSMPUG00000011732	SMG7	95	81.960	Mustela_putorius_furo
ENSMGAG00000001561	SMG7	98	81.271	ENSMLUG00000015417	SMG7	97	81.443	Myotis_lucifugus
ENSMGAG00000001561	SMG7	98	88.500	ENSNGAG00000009836	Smg7	97	87.960	Nannospalax_galili
ENSMGAG00000001561	SMG7	98	60.225	ENSNBRG00000024343	smg7	99	60.245	Neolamprologus_brichardi
ENSMGAG00000001561	SMG7	98	89.218	ENSNLEG00000018018	SMG7	97	89.398	Nomascus_leucogenys
ENSMGAG00000001561	SMG7	70	89.024	ENSMEUG00000004681	SMG7	73	89.024	Notamacropus_eugenii
ENSMGAG00000001561	SMG7	96	73.647	ENSOPRG00000013942	SMG7	96	73.211	Ochotona_princeps
ENSMGAG00000001561	SMG7	98	88.230	ENSODEG00000010390	SMG7	97	88.230	Octodon_degus
ENSMGAG00000001561	SMG7	99	64.469	ENSONIG00000000277	smg7	99	64.175	Oreochromis_niloticus
ENSMGAG00000001561	SMG7	97	81.818	ENSOANG00000000994	SMG7	98	81.905	Ornithorhynchus_anatinus
ENSMGAG00000001561	SMG7	99	76.624	ENSOCUG00000005887	SMG7	91	77.273	Oryctolagus_cuniculus
ENSMGAG00000001561	SMG7	99	62.892	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSMGAG00000001561	SMG7	99	63.153	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSMGAG00000001561	SMG7	99	63.502	ENSORLG00015012289	smg7	99	62.716	Oryzias_latipes_hsok
ENSMGAG00000001561	SMG7	99	61.760	ENSOMEG00000002328	smg7	99	62.171	Oryzias_melastigma
ENSMGAG00000001561	SMG7	96	81.081	ENSOGAG00000003107	SMG7	93	80.820	Otolemur_garnettii
ENSMGAG00000001561	SMG7	99	84.951	ENSOARG00000001352	SMG7	99	85.040	Ovis_aries
ENSMGAG00000001561	SMG7	98	89.218	ENSPPAG00000031619	SMG7	97	89.398	Pan_paniscus
ENSMGAG00000001561	SMG7	99	89.576	ENSPPRG00000011222	SMG7	99	89.488	Panthera_pardus
ENSMGAG00000001561	SMG7	97	85.379	ENSPTIG00000007242	SMG7	99	85.292	Panthera_tigris_altaica
ENSMGAG00000001561	SMG7	98	89.218	ENSPTRG00000001764	SMG7	97	89.398	Pan_troglodytes
ENSMGAG00000001561	SMG7	98	89.128	ENSPANG00000004520	SMG7	97	89.308	Papio_anubis
ENSMGAG00000001561	SMG7	99	65.496	ENSPKIG00000007242	smg7	97	65.062	Paramormyrops_kingsleyae
ENSMGAG00000001561	SMG7	97	91.561	ENSPSIG00000012201	SMG7	98	91.289	Pelodiscus_sinensis
ENSMGAG00000001561	SMG7	70	41.484	ENSPMGG00000021833	smg7	95	42.387	Periophthalmus_magnuspinnatus
ENSMGAG00000001561	SMG7	99	84.894	ENSPEMG00000011315	Smg7	99	85.071	Peromyscus_maniculatus_bairdii
ENSMGAG00000001561	SMG7	98	89.128	ENSPCIG00000003786	SMG7	97	89.128	Phascolarctos_cinereus
ENSMGAG00000001561	SMG7	99	60.779	ENSPFOG00000019219	smg7	89	66.327	Poecilia_formosa
ENSMGAG00000001561	SMG7	99	63.385	ENSPLAG00000001446	smg7	99	63.433	Poecilia_latipinna
ENSMGAG00000001561	SMG7	96	62.689	ENSPMEG00000005218	smg7	99	62.743	Poecilia_mexicana
ENSMGAG00000001561	SMG7	85	64.018	ENSPREG00000019039	smg7	91	60.511	Poecilia_reticulata
ENSMGAG00000001561	SMG7	98	89.218	ENSPPYG00000000427	SMG7	97	89.398	Pongo_abelii
ENSMGAG00000001561	SMG7	90	85.129	ENSPCAG00000008360	SMG7	88	85.129	Procavia_capensis
ENSMGAG00000001561	SMG7	98	86.164	ENSPCOG00000011996	SMG7	97	85.714	Propithecus_coquereli
ENSMGAG00000001561	SMG7	91	76.535	ENSPVAG00000000851	SMG7	89	76.719	Pteropus_vampyrus
ENSMGAG00000001561	SMG7	99	65.544	ENSPNYG00000007643	smg7	99	64.935	Pundamilia_nyererei
ENSMGAG00000001561	SMG7	99	68.815	ENSPNAG00000011374	smg7	97	67.848	Pygocentrus_nattereri
ENSMGAG00000001561	SMG7	99	87.202	ENSRNOG00000027962	Smg7	99	87.202	Rattus_norvegicus
ENSMGAG00000001561	SMG7	98	89.039	ENSRBIG00000036316	SMG7	97	89.218	Rhinopithecus_bieti
ENSMGAG00000001561	SMG7	98	89.039	ENSRROG00000035719	SMG7	97	89.218	Rhinopithecus_roxellana
ENSMGAG00000001561	SMG7	98	85.791	ENSSBOG00000023454	SMG7	98	85.031	Saimiri_boliviensis_boliviensis
ENSMGAG00000001561	SMG7	98	88.849	ENSSHAG00000013147	SMG7	97	88.769	Sarcophilus_harrisii
ENSMGAG00000001561	SMG7	99	69.238	ENSSFOG00015017252	smg7	97	69.190	Scleropages_formosus
ENSMGAG00000001561	SMG7	99	65.048	ENSSMAG00000006067	smg7	99	64.935	Scophthalmus_maximus
ENSMGAG00000001561	SMG7	63	73.343	ENSSDUG00000017543	smg7	99	64.621	Seriola_dumerili
ENSMGAG00000001561	SMG7	98	91.637	ENSSPUG00000002064	SMG7	97	91.637	Sphenodon_punctatus
ENSMGAG00000001561	SMG7	98	66.138	ENSSPAG00000008733	smg7	98	65.066	Stegastes_partitus
ENSMGAG00000001561	SMG7	98	85.445	ENSSSCG00000015558	SMG7	97	85.624	Sus_scrofa
ENSMGAG00000001561	SMG7	99	96.640	ENSTGUG00000003928	SMG7	99	96.640	Taeniopygia_guttata
ENSMGAG00000001561	SMG7	99	58.503	ENSTNIG00000002802	smg7	90	61.921	Tetraodon_nigroviridis
ENSMGAG00000001561	SMG7	77	87.166	ENSTBEG00000003220	SMG7	71	87.166	Tupaia_belangeri
ENSMGAG00000001561	SMG7	96	81.168	ENSTTRG00000014778	SMG7	94	80.907	Tursiops_truncatus
ENSMGAG00000001561	SMG7	95	85.000	ENSUAMG00000017473	SMG7	98	85.093	Ursus_americanus
ENSMGAG00000001561	SMG7	95	85.000	ENSUMAG00000016389	SMG7	98	85.093	Ursus_maritimus
ENSMGAG00000001561	SMG7	98	85.624	ENSVVUG00000008976	SMG7	97	85.355	Vulpes_vulpes
ENSMGAG00000001561	SMG7	99	71.004	ENSXETG00000012528	smg7	98	70.053	Xenopus_tropicalis
ENSMGAG00000001561	SMG7	99	63.307	ENSXMAG00000007123	smg7	99	63.185	Xiphophorus_maculatus