EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000001831 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 17235 bases
Position: chr10:3030513-3047747
Accession: 100541104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000001419	ResIII	PF04851.15	1.6e-25	1	2
ENSMGAP00000001419	ResIII	PF04851.15	1.6e-25	2	2
ENSMGAP00000001419	DEAD	PF00270.29	1.2e-52	1	2
ENSMGAP00000001419	DEAD	PF00270.29	1.2e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000018374	SNRNP200-201	6362	-	ENSMGAP00000017686	545 (aa)	-	G3UQ20
ENSMGAT00000002079	SNRNP200-202	6360	XM_010715558	ENSMGAP00000001419	2065 (aa)	XP_010713860	G1MSU1

Gene Model

Click here to download ENSMGAG00000001831's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000001831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000001831	SNRNP200	89	42.886	ENSMGAG00000013551	ASCC3	80	44.826
ENSMGAG00000001831	SNRNP200	70	31.224	ENSMGAG00000008437	HFM1	96	31.224

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000001831	SNRNP200	100	97.242	ENSG00000144028	SNRNP200	97	97.242	Homo_sapiens
ENSMGAG00000001831	SNRNP200	99	90.687	ENSAPOG00000010223	snrnp200	97	90.566	Acanthochromis_polyacanthus
ENSMGAG00000001831	SNRNP200	100	97.291	ENSAMEG00000008996	SNRNP200	97	97.291	Ailuropoda_melanoleuca
ENSMGAG00000001831	SNRNP200	99	90.114	ENSACIG00000001764	snrnp200	97	90.108	Amphilophus_citrinellus
ENSMGAG00000001831	SNRNP200	99	90.590	ENSAOCG00000024593	snrnp200	99	89.892	Amphiprion_ocellaris
ENSMGAG00000001831	SNRNP200	99	89.951	ENSAPEG00000012554	snrnp200	99	89.946	Amphiprion_percula
ENSMGAG00000001831	SNRNP200	99	90.590	ENSATEG00000022522	snrnp200	97	90.469	Anabas_testudineus
ENSMGAG00000001831	SNRNP200	100	99.613	ENSAPLG00000004313	SNRNP200	97	99.613	Anas_platyrhynchos
ENSMGAG00000001831	SNRNP200	99	97.210	ENSACAG00000000434	SNRNP200	96	97.210	Anolis_carolinensis
ENSMGAG00000001831	SNRNP200	99	94.146	ENSANAG00000036625	SNRNP200	97	93.012	Aotus_nancymaae
ENSMGAG00000001831	SNRNP200	99	90.444	ENSACLG00000011188	snrnp200	97	90.324	Astatotilapia_calliptera
ENSMGAG00000001831	SNRNP200	99	89.830	ENSAMXG00000005684	snrnp200	97	89.695	Astyanax_mexicanus
ENSMGAG00000001831	SNRNP200	100	96.855	ENSBTAG00000000848	SNRNP200	97	96.855	Bos_taurus
ENSMGAG00000001831	SNRNP200	100	97.242	ENSCJAG00000007514	SNRNP200	97	97.242	Callithrix_jacchus
ENSMGAG00000001831	SNRNP200	100	96.480	ENSCAFG00020019979	SNRNP200	100	97.025	Canis_lupus_dingo
ENSMGAG00000001831	SNRNP200	100	97.049	ENSCHIG00000020611	SNRNP200	97	97.049	Capra_hircus
ENSMGAG00000001831	SNRNP200	100	97.291	ENSTSYG00000010467	SNRNP200	97	97.291	Carlito_syrichta
ENSMGAG00000001831	SNRNP200	100	96.911	ENSCAPG00000017234	SNRNP200	97	96.911	Cavia_aperea
ENSMGAG00000001831	SNRNP200	100	97.146	ENSCPOG00000006776	SNRNP200	97	97.146	Cavia_porcellus
ENSMGAG00000001831	SNRNP200	100	97.242	ENSCCAG00000033962	SNRNP200	97	97.242	Cebus_capucinus
ENSMGAG00000001831	SNRNP200	100	97.242	ENSCATG00000015790	SNRNP200	97	97.242	Cercocebus_atys
ENSMGAG00000001831	SNRNP200	100	97.097	ENSCLAG00000004116	SNRNP200	97	97.097	Chinchilla_lanigera
ENSMGAG00000001831	SNRNP200	100	97.194	ENSCSAG00000017369	SNRNP200	97	97.194	Chlorocebus_sabaeus
ENSMGAG00000001831	SNRNP200	74	98.276	ENSCHOG00000012981	-	56	98.276	Choloepus_hoffmanni
ENSMGAG00000001831	SNRNP200	100	97.874	ENSCPBG00000022571	SNRNP200	97	97.874	Chrysemys_picta_bellii
ENSMGAG00000001831	SNRNP200	99	76.544	ENSCING00000005082	-	97	76.845	Ciona_intestinalis
ENSMGAG00000001831	SNRNP200	97	97.163	ENSCANG00000033932	SNRNP200	100	97.163	Colobus_angolensis_palliatus
ENSMGAG00000001831	SNRNP200	100	97.242	ENSCGRG00001022610	Snrnp200	97	97.242	Cricetulus_griseus_chok1gshd
ENSMGAG00000001831	SNRNP200	100	96.667	ENSCGRG00000016472	Snrnp200	97	96.667	Cricetulus_griseus_crigri
ENSMGAG00000001831	SNRNP200	99	89.476	ENSCSEG00000016399	snrnp200	97	89.453	Cynoglossus_semilaevis
ENSMGAG00000001831	SNRNP200	99	85.270	ENSCVAG00000017631	snrnp200	97	85.286	Cyprinodon_variegatus
ENSMGAG00000001831	SNRNP200	99	89.864	ENSDARG00000077536	snrnp200	97	89.840	Danio_rerio
ENSMGAG00000001831	SNRNP200	100	95.791	ENSDNOG00000011227	SNRNP200	97	95.791	Dasypus_novemcinctus
ENSMGAG00000001831	SNRNP200	99	94.431	ENSDORG00000005861	Snrnp200	97	94.396	Dipodomys_ordii
ENSMGAG00000001831	SNRNP200	100	74.555	FBgn0263599	l(3)72Ab	97	74.459	Drosophila_melanogaster
ENSMGAG00000001831	SNRNP200	95	97.985	ENSETEG00000000162	SNRNP200	71	97.985	Echinops_telfairi
ENSMGAG00000001831	SNRNP200	86	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSMGAG00000001831	SNRNP200	99	96.386	ENSEASG00005001884	SNRNP200	97	96.386	Equus_asinus_asinus
ENSMGAG00000001831	SNRNP200	100	97.291	ENSECAG00000019675	SNRNP200	97	97.291	Equus_caballus
ENSMGAG00000001831	SNRNP200	89	95.833	ENSEEUG00000012178	SNRNP200	91	95.822	Erinaceus_europaeus
ENSMGAG00000001831	SNRNP200	99	90.414	ENSELUG00000018948	snrnp200	97	90.276	Esox_lucius
ENSMGAG00000001831	SNRNP200	100	97.339	ENSFCAG00000010699	SNRNP200	97	97.339	Felis_catus
ENSMGAG00000001831	SNRNP200	94	91.159	ENSFALG00000001368	-	93	91.159	Ficedula_albicollis
ENSMGAG00000001831	SNRNP200	100	97.049	ENSFDAG00000004683	SNRNP200	97	97.049	Fukomys_damarensis
ENSMGAG00000001831	SNRNP200	99	87.707	ENSFHEG00000003786	snrnp200	97	87.712	Fundulus_heteroclitus
ENSMGAG00000001831	SNRNP200	99	89.395	ENSGMOG00000004881	snrnp200	97	89.420	Gadus_morhua
ENSMGAG00000001831	SNRNP200	99	87.852	ENSGAFG00000010807	snrnp200	97	87.857	Gambusia_affinis
ENSMGAG00000001831	SNRNP200	99	90.019	ENSGACG00000011474	snrnp200	96	90.048	Gasterosteus_aculeatus
ENSMGAG00000001831	SNRNP200	94	97.943	ENSGAGG00000016069	SNRNP200	98	96.970	Gopherus_agassizii
ENSMGAG00000001831	SNRNP200	100	97.242	ENSGGOG00000005174	SNRNP200	97	97.242	Gorilla_gorilla
ENSMGAG00000001831	SNRNP200	99	87.811	ENSHBUG00000011322	snrnp200	99	87.817	Haplochromis_burtoni
ENSMGAG00000001831	SNRNP200	100	97.146	ENSHGLG00000006654	SNRNP200	97	97.146	Heterocephalus_glaber_female
ENSMGAG00000001831	SNRNP200	100	97.146	ENSHGLG00100018594	SNRNP200	97	97.146	Heterocephalus_glaber_male
ENSMGAG00000001831	SNRNP200	100	97.242	ENSSTOG00000016351	SNRNP200	97	97.242	Ictidomys_tridecemlineatus
ENSMGAG00000001831	SNRNP200	100	97.097	ENSJJAG00000023659	Snrnp200	97	97.097	Jaculus_jaculus
ENSMGAG00000001831	SNRNP200	99	87.361	ENSKMAG00000003665	snrnp200	97	87.367	Kryptolebias_marmoratus
ENSMGAG00000001831	SNRNP200	99	90.282	ENSLBEG00000021585	snrnp200	97	90.276	Labrus_bergylta
ENSMGAG00000001831	SNRNP200	85	93.654	ENSLACG00000000226	SNRNP200	99	94.091	Latimeria_chalumnae
ENSMGAG00000001831	SNRNP200	99	91.756	ENSLOCG00000015198	snrnp200	97	91.727	Lepisosteus_oculatus
ENSMGAG00000001831	SNRNP200	100	97.097	ENSLAFG00000015626	SNRNP200	97	97.097	Loxodonta_africana
ENSMGAG00000001831	SNRNP200	100	97.194	ENSMFAG00000040174	SNRNP200	99	97.661	Macaca_fascicularis
ENSMGAG00000001831	SNRNP200	100	97.194	ENSMMUG00000023261	SNRNP200	97	97.194	Macaca_mulatta
ENSMGAG00000001831	SNRNP200	100	97.146	ENSMNEG00000032398	SNRNP200	97	97.146	Macaca_nemestrina
ENSMGAG00000001831	SNRNP200	100	97.242	ENSMLEG00000019083	SNRNP200	99	97.661	Mandrillus_leucophaeus
ENSMGAG00000001831	SNRNP200	99	89.995	ENSMAMG00000007851	snrnp200	97	89.942	Mastacembelus_armatus
ENSMGAG00000001831	SNRNP200	99	87.811	ENSMZEG00005010787	snrnp200	99	87.817	Maylandia_zebra
ENSMGAG00000001831	SNRNP200	100	97.194	ENSMAUG00000011825	Snrnp200	97	97.194	Mesocricetus_auratus
ENSMGAG00000001831	SNRNP200	100	97.194	ENSMICG00000004710	SNRNP200	98	97.183	Microcebus_murinus
ENSMGAG00000001831	SNRNP200	100	94.630	ENSMOCG00000011814	Snrnp200	97	94.630	Microtus_ochrogaster
ENSMGAG00000001831	SNRNP200	99	88.640	ENSMMOG00000014167	snrnp200	97	88.534	Mola_mola
ENSMGAG00000001831	SNRNP200	100	97.000	ENSMODG00000008475	SNRNP200	97	97.000	Monodelphis_domestica
ENSMGAG00000001831	SNRNP200	99	90.532	ENSMALG00000001973	snrnp200	97	90.469	Monopterus_albus
ENSMGAG00000001831	SNRNP200	100	97.097	MGP_CAROLIEiJ_G0024250	Snrnp200	97	97.097	Mus_caroli
ENSMGAG00000001831	SNRNP200	100	97.049	ENSMUSG00000003660	Snrnp200	97	97.049	Mus_musculus
ENSMGAG00000001831	SNRNP200	100	97.097	MGP_PahariEiJ_G0025695	Snrnp200	97	97.097	Mus_pahari
ENSMGAG00000001831	SNRNP200	100	97.049	MGP_SPRETEiJ_G0025170	Snrnp200	97	97.049	Mus_spretus
ENSMGAG00000001831	SNRNP200	100	97.339	ENSMPUG00000008949	SNRNP200	97	97.339	Mustela_putorius_furo
ENSMGAG00000001831	SNRNP200	99	93.307	ENSMLUG00000027511	-	97	93.275	Myotis_lucifugus
ENSMGAG00000001831	SNRNP200	100	96.763	ENSMLUG00000010493	SNRNP200	97	96.763	Myotis_lucifugus
ENSMGAG00000001831	SNRNP200	100	97.242	ENSNGAG00000021993	Snrnp200	97	97.242	Nannospalax_galili
ENSMGAG00000001831	SNRNP200	93	90.261	ENSNBRG00000017960	snrnp200	98	90.313	Neolamprologus_brichardi
ENSMGAG00000001831	SNRNP200	99	92.537	ENSNLEG00000000025	SNRNP200	97	92.507	Nomascus_leucogenys
ENSMGAG00000001831	SNRNP200	100	98.095	ENSMEUG00000010532	SNRNP200	75	98.095	Notamacropus_eugenii
ENSMGAG00000001831	SNRNP200	99	95.866	ENSOPRG00000015464	SNRNP200	97	95.886	Ochotona_princeps
ENSMGAG00000001831	SNRNP200	100	97.146	ENSODEG00000008366	SNRNP200	97	97.146	Octodon_degus
ENSMGAG00000001831	SNRNP200	99	90.297	ENSONIG00000010714	snrnp200	97	90.179	Oreochromis_niloticus
ENSMGAG00000001831	SNRNP200	100	97.097	ENSOCUG00000009864	SNRNP200	97	97.097	Oryctolagus_cuniculus
ENSMGAG00000001831	SNRNP200	99	90.097	ENSORLG00000012286	snrnp200	100	90.063	Oryzias_latipes
ENSMGAG00000001831	SNRNP200	99	90.097	ENSORLG00020004648	snrnp200	97	90.082	Oryzias_latipes_hni
ENSMGAG00000001831	SNRNP200	99	90.049	ENSORLG00015019114	snrnp200	100	90.134	Oryzias_latipes_hsok
ENSMGAG00000001831	SNRNP200	99	90.356	ENSOMEG00000011834	snrnp200	97	90.227	Oryzias_melastigma
ENSMGAG00000001831	SNRNP200	100	97.291	ENSOGAG00000006879	SNRNP200	97	97.291	Otolemur_garnettii
ENSMGAG00000001831	SNRNP200	100	95.986	ENSOARG00000013949	SNRNP200	97	95.986	Ovis_aries
ENSMGAG00000001831	SNRNP200	100	97.242	ENSPPAG00000041559	SNRNP200	97	97.242	Pan_paniscus
ENSMGAG00000001831	SNRNP200	100	97.339	ENSPPRG00000004435	SNRNP200	97	97.339	Panthera_pardus
ENSMGAG00000001831	SNRNP200	100	96.952	ENSPTIG00000006380	SNRNP200	97	96.952	Panthera_tigris_altaica
ENSMGAG00000001831	SNRNP200	100	97.242	ENSPTRG00000012230	SNRNP200	97	97.242	Pan_troglodytes
ENSMGAG00000001831	SNRNP200	100	97.194	ENSPANG00000006017	SNRNP200	97	97.194	Papio_anubis
ENSMGAG00000001831	SNRNP200	99	90.834	ENSPKIG00000014762	snrnp200	99	90.794	Paramormyrops_kingsleyae
ENSMGAG00000001831	SNRNP200	100	96.905	ENSPSIG00000008580	SNRNP200	97	96.905	Pelodiscus_sinensis
ENSMGAG00000001831	SNRNP200	100	97.146	ENSPCIG00000023050	SNRNP200	97	97.146	Phascolarctos_cinereus
ENSMGAG00000001831	SNRNP200	99	90.432	ENSPFOG00000015110	snrnp200	97	90.474	Poecilia_formosa
ENSMGAG00000001831	SNRNP200	99	90.240	ENSPLAG00000006711	snrnp200	98	90.233	Poecilia_latipinna
ENSMGAG00000001831	SNRNP200	99	90.240	ENSPMEG00000021166	snrnp200	98	90.233	Poecilia_mexicana
ENSMGAG00000001831	SNRNP200	99	90.379	ENSPREG00000008875	snrnp200	97	90.373	Poecilia_reticulata
ENSMGAG00000001831	SNRNP200	100	97.242	ENSPPYG00000012068	SNRNP200	97	97.242	Pongo_abelii
ENSMGAG00000001831	SNRNP200	93	98.730	ENSPCAG00000008536	SNRNP200	83	98.730	Procavia_capensis
ENSMGAG00000001831	SNRNP200	100	97.242	ENSPCOG00000024608	SNRNP200	97	97.242	Propithecus_coquereli
ENSMGAG00000001831	SNRNP200	95	99.091	ENSPVAG00000005860	SNRNP200	89	98.667	Pteropus_vampyrus
ENSMGAG00000001831	SNRNP200	99	85.853	ENSPNYG00000017476	snrnp200	97	85.769	Pundamilia_nyererei
ENSMGAG00000001831	SNRNP200	99	85.306	ENSPNAG00000010998	snrnp200	97	85.293	Pygocentrus_nattereri
ENSMGAG00000001831	SNRNP200	100	97.194	ENSRNOG00000012157	Snrnp200	97	97.194	Rattus_norvegicus
ENSMGAG00000001831	SNRNP200	100	97.242	ENSRBIG00000044690	-	97	97.242	Rhinopithecus_bieti
ENSMGAG00000001831	SNRNP200	100	97.242	ENSRROG00000037952	-	97	97.242	Rhinopithecus_roxellana
ENSMGAG00000001831	SNRNP200	100	97.242	ENSSBOG00000035471	SNRNP200	97	97.640	Saimiri_boliviensis_boliviensis
ENSMGAG00000001831	SNRNP200	100	97.194	ENSSHAG00000000758	SNRNP200	100	97.194	Sarcophilus_harrisii
ENSMGAG00000001831	SNRNP200	99	90.754	ENSSFOG00015018826	snrnp200	97	90.614	Scleropages_formosus
ENSMGAG00000001831	SNRNP200	99	90.346	ENSSMAG00000005463	snrnp200	98	90.211	Scophthalmus_maximus
ENSMGAG00000001831	SNRNP200	99	90.492	ENSSDUG00000021410	snrnp200	97	90.373	Seriola_dumerili
ENSMGAG00000001831	SNRNP200	99	90.492	ENSSLDG00000010884	snrnp200	97	90.373	Seriola_lalandi_dorsalis
ENSMGAG00000001831	SNRNP200	95	98.026	ENSSARG00000010728	SNRNP200	90	98.026	Sorex_araneus
ENSMGAG00000001831	SNRNP200	100	97.339	ENSSPUG00000003726	-	97	97.339	Sphenodon_punctatus
ENSMGAG00000001831	SNRNP200	99	90.639	ENSSPAG00000001842	snrnp200	97	90.518	Stegastes_partitus
ENSMGAG00000001831	SNRNP200	100	97.194	ENSSSCG00000008127	SNRNP200	98	97.191	Sus_scrofa
ENSMGAG00000001831	SNRNP200	99	88.804	ENSTGUG00000014475	-	97	88.776	Taeniopygia_guttata
ENSMGAG00000001831	SNRNP200	99	90.249	ENSTRUG00000001307	snrnp200	97	90.131	Takifugu_rubripes
ENSMGAG00000001831	SNRNP200	99	85.573	ENSTNIG00000004320	snrnp200	97	78.744	Tetraodon_nigroviridis
ENSMGAG00000001831	SNRNP200	82	100.000	ENSTBEG00000003329	-	63	100.000	Tupaia_belangeri
ENSMGAG00000001831	SNRNP200	100	96.952	ENSTTRG00000004983	SNRNP200	97	96.952	Tursiops_truncatus
ENSMGAG00000001831	SNRNP200	74	90.710	ENSUAMG00000008395	-	88	90.654	Ursus_americanus
ENSMGAG00000001831	SNRNP200	100	97.339	ENSUMAG00000012385	SNRNP200	97	97.339	Ursus_maritimus
ENSMGAG00000001831	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	66	100.000	Vicugna_pacos
ENSMGAG00000001831	SNRNP200	100	97.104	ENSVVUG00000026247	SNRNP200	98	97.405	Vulpes_vulpes
ENSMGAG00000001831	SNRNP200	99	94.140	ENSXETG00000001243	snrnp200	97	94.106	Xenopus_tropicalis
ENSMGAG00000001831	SNRNP200	99	90.386	ENSXMAG00000002058	snrnp200	97	90.378	Xiphophorus_maculatus