EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000002119 (Gene tree)
Gene ID: 100550255
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 5026 bases
Position: chr21:869153-874178
Accession: 100550255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000017631	SBDS	PF01172.18	3e-31	1	1
ENSMGAP00000001657	SBDS	PF01172.18	3e-31	1	1
ENSMGAP00000017631	SBDS_C	PF09377.10	4.5e-39	1	1
ENSMGAP00000001657	SBDS_C	PF09377.10	4.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000002321	SBDS-201	3008	XM_003211652	ENSMGAP00000001657	250 (aa)	XP_003211700	G1MTD3
ENSMGAT00000019212	SBDS-202	2969	-	ENSMGAP00000017631	250 (aa)	-	G3UPX1

Gene Model

Click here to download ENSMGAG00000002119's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000002119's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000002119	SBDS	100	89.200	ENSG00000126524	SBDS	100	89.200	Homo_sapiens
ENSMGAG00000002119	SBDS	99	84.337	ENSAPOG00000014285	sbds	100	84.337	Acanthochromis_polyacanthus
ENSMGAG00000002119	SBDS	100	89.200	ENSAMEG00000018167	SBDS	100	89.200	Ailuropoda_melanoleuca
ENSMGAG00000002119	SBDS	99	84.127	ENSACIG00000007308	sbds	100	84.127	Amphilophus_citrinellus
ENSMGAG00000002119	SBDS	99	84.337	ENSAOCG00000016770	sbds	100	84.337	Amphiprion_ocellaris
ENSMGAG00000002119	SBDS	99	84.739	ENSAPEG00000015897	sbds	100	84.739	Amphiprion_percula
ENSMGAG00000002119	SBDS	99	85.141	ENSATEG00000006901	sbds	100	85.141	Anabas_testudineus
ENSMGAG00000002119	SBDS	83	89.372	ENSANAG00000037501	-	100	89.372	Aotus_nancymaae
ENSMGAG00000002119	SBDS	92	83.117	ENSANAG00000024342	-	97	83.117	Aotus_nancymaae
ENSMGAG00000002119	SBDS	99	85.141	ENSACLG00000018750	sbds	100	85.141	Astatotilapia_calliptera
ENSMGAG00000002119	SBDS	100	86.400	ENSAMXG00000005361	sbds	100	86.400	Astyanax_mexicanus
ENSMGAG00000002119	SBDS	100	89.600	ENSBTAG00000004051	SBDS	100	89.600	Bos_taurus
ENSMGAG00000002119	SBDS	98	58.537	WBGene00021063	sbds-1	97	58.537	Caenorhabditis_elegans
ENSMGAG00000002119	SBDS	100	89.200	ENSCJAG00000041007	SBDS	100	89.200	Callithrix_jacchus
ENSMGAG00000002119	SBDS	100	87.302	ENSCAFG00000010797	SBDS	100	87.302	Canis_familiaris
ENSMGAG00000002119	SBDS	100	89.200	ENSCAFG00020005357	SBDS	100	89.200	Canis_lupus_dingo
ENSMGAG00000002119	SBDS	100	89.600	ENSCHIG00000026854	SBDS	100	89.600	Capra_hircus
ENSMGAG00000002119	SBDS	100	89.200	ENSTSYG00000033822	SBDS	100	89.200	Carlito_syrichta
ENSMGAG00000002119	SBDS	66	90.244	ENSCAPG00000006634	SBDS	100	90.244	Cavia_aperea
ENSMGAG00000002119	SBDS	100	89.600	ENSCPOG00000036143	SBDS	100	89.600	Cavia_porcellus
ENSMGAG00000002119	SBDS	100	89.200	ENSCCAG00000020671	SBDS	100	89.200	Cebus_capucinus
ENSMGAG00000002119	SBDS	100	89.200	ENSCATG00000039026	SBDS	100	89.200	Cercocebus_atys
ENSMGAG00000002119	SBDS	99	63.306	ENSCLAG00000002113	-	100	63.052	Chinchilla_lanigera
ENSMGAG00000002119	SBDS	100	90.000	ENSCLAG00000005721	-	100	90.000	Chinchilla_lanigera
ENSMGAG00000002119	SBDS	100	89.200	ENSCSAG00000018275	SBDS	100	89.200	Chlorocebus_sabaeus
ENSMGAG00000002119	SBDS	100	84.400	ENSCHOG00000003795	SBDS	100	84.400	Choloepus_hoffmanni
ENSMGAG00000002119	SBDS	100	93.600	ENSCPBG00000014893	SBDS	100	93.600	Chrysemys_picta_bellii
ENSMGAG00000002119	SBDS	99	66.129	ENSCSAVG00000011811	-	99	66.129	Ciona_savignyi
ENSMGAG00000002119	SBDS	100	89.200	ENSCANG00000032368	SBDS	100	89.200	Colobus_angolensis_palliatus
ENSMGAG00000002119	SBDS	66	87.805	ENSCGRG00001019886	Sbds	100	87.805	Cricetulus_griseus_chok1gshd
ENSMGAG00000002119	SBDS	83	87.923	ENSCGRG00000009211	Sbds	100	87.923	Cricetulus_griseus_crigri
ENSMGAG00000002119	SBDS	99	82.731	ENSCSEG00000005798	sbds	100	82.731	Cynoglossus_semilaevis
ENSMGAG00000002119	SBDS	99	82.329	ENSCVAG00000001053	sbds	100	82.329	Cyprinodon_variegatus
ENSMGAG00000002119	SBDS	100	87.600	ENSDARG00000027803	sbds	100	87.600	Danio_rerio
ENSMGAG00000002119	SBDS	100	89.200	ENSDNOG00000041174	SBDS	100	89.200	Dasypus_novemcinctus
ENSMGAG00000002119	SBDS	100	89.200	ENSDORG00000026218	Sbds	100	89.200	Dipodomys_ordii
ENSMGAG00000002119	SBDS	90	60.526	FBgn0035714	CG8549	98	60.729	Drosophila_melanogaster
ENSMGAG00000002119	SBDS	93	59.227	ENSEBUG00000015780	sbds	100	59.227	Eptatretus_burgeri
ENSMGAG00000002119	SBDS	100	89.200	ENSEASG00005008821	SBDS	100	89.200	Equus_asinus_asinus
ENSMGAG00000002119	SBDS	100	89.200	ENSECAG00000008202	SBDS	100	89.200	Equus_caballus
ENSMGAG00000002119	SBDS	83	68.750	ENSEEUG00000004768	SBDS	100	68.750	Erinaceus_europaeus
ENSMGAG00000002119	SBDS	100	83.200	ENSELUG00000008382	sbds	100	83.200	Esox_lucius
ENSMGAG00000002119	SBDS	100	88.800	ENSFCAG00000022142	SBDS	100	88.800	Felis_catus
ENSMGAG00000002119	SBDS	100	94.800	ENSFALG00000013808	SBDS	100	94.800	Ficedula_albicollis
ENSMGAG00000002119	SBDS	100	89.600	ENSFDAG00000018947	-	100	89.600	Fukomys_damarensis
ENSMGAG00000002119	SBDS	99	81.526	ENSFHEG00000000708	sbds	100	81.526	Fundulus_heteroclitus
ENSMGAG00000002119	SBDS	100	81.600	ENSGMOG00000018356	sbds	99	81.600	Gadus_morhua
ENSMGAG00000002119	SBDS	100	100.000	ENSGALG00000027989	SBDS	100	100.000	Gallus_gallus
ENSMGAG00000002119	SBDS	92	80.349	ENSGAFG00000014204	sbds	99	80.349	Gambusia_affinis
ENSMGAG00000002119	SBDS	99	81.124	ENSGACG00000012697	sbds	100	81.124	Gasterosteus_aculeatus
ENSMGAG00000002119	SBDS	86	93.925	ENSGAGG00000022402	SBDS	100	93.925	Gopherus_agassizii
ENSMGAG00000002119	SBDS	99	68.924	ENSGGOG00000040023	-	97	68.924	Gorilla_gorilla
ENSMGAG00000002119	SBDS	99	85.141	ENSHBUG00000002660	sbds	100	85.141	Haplochromis_burtoni
ENSMGAG00000002119	SBDS	100	88.800	ENSHGLG00000009671	SBDS	100	88.800	Heterocephalus_glaber_female
ENSMGAG00000002119	SBDS	100	88.800	ENSHGLG00100011332	SBDS	100	88.800	Heterocephalus_glaber_male
ENSMGAG00000002119	SBDS	99	81.928	ENSHCOG00000018606	sbds	100	81.928	Hippocampus_comes
ENSMGAG00000002119	SBDS	100	85.200	ENSIPUG00000006536	sbds	100	85.200	Ictalurus_punctatus
ENSMGAG00000002119	SBDS	100	86.000	ENSJJAG00000012033	-	100	86.000	Jaculus_jaculus
ENSMGAG00000002119	SBDS	100	63.241	ENSJJAG00000003934	-	100	63.241	Jaculus_jaculus
ENSMGAG00000002119	SBDS	99	85.944	ENSKMAG00000018542	sbds	100	85.944	Kryptolebias_marmoratus
ENSMGAG00000002119	SBDS	99	81.928	ENSLBEG00000016687	sbds	100	81.928	Labrus_bergylta
ENSMGAG00000002119	SBDS	100	73.622	ENSLACG00000018916	SBDS	100	73.622	Latimeria_chalumnae
ENSMGAG00000002119	SBDS	100	88.800	ENSLOCG00000004073	sbds	100	88.800	Lepisosteus_oculatus
ENSMGAG00000002119	SBDS	100	88.800	ENSLAFG00000008763	SBDS	100	88.800	Loxodonta_africana
ENSMGAG00000002119	SBDS	100	89.200	ENSMFAG00000032620	SBDS	100	89.200	Macaca_fascicularis
ENSMGAG00000002119	SBDS	100	89.200	ENSMMUG00000045653	SBDS	100	89.200	Macaca_mulatta
ENSMGAG00000002119	SBDS	100	89.200	ENSMNEG00000031523	SBDS	100	89.200	Macaca_nemestrina
ENSMGAG00000002119	SBDS	100	68.504	ENSMLEG00000036826	SBDS	100	68.504	Mandrillus_leucophaeus
ENSMGAG00000002119	SBDS	99	84.337	ENSMAMG00000016062	sbds	100	84.337	Mastacembelus_armatus
ENSMGAG00000002119	SBDS	99	85.141	ENSMZEG00005024385	sbds	100	85.141	Maylandia_zebra
ENSMGAG00000002119	SBDS	99	71.084	ENSMAUG00000022214	-	100	71.084	Mesocricetus_auratus
ENSMGAG00000002119	SBDS	100	89.600	ENSMICG00000014366	SBDS	100	89.600	Microcebus_murinus
ENSMGAG00000002119	SBDS	100	88.800	ENSMOCG00000011739	Sbds	100	88.800	Microtus_ochrogaster
ENSMGAG00000002119	SBDS	99	75.200	ENSMMOG00000005061	sbds	100	74.800	Mola_mola
ENSMGAG00000002119	SBDS	100	90.400	ENSMODG00000006644	SBDS	100	90.400	Monodelphis_domestica
ENSMGAG00000002119	SBDS	99	83.133	ENSMALG00000010219	sbds	100	83.133	Monopterus_albus
ENSMGAG00000002119	SBDS	100	88.800	MGP_CAROLIEiJ_G0027800	Sbds	100	88.800	Mus_caroli
ENSMGAG00000002119	SBDS	100	88.400	ENSMUSG00000025337	Sbds	100	88.400	Mus_musculus
ENSMGAG00000002119	SBDS	100	88.400	MGP_PahariEiJ_G0024384	Sbds	100	88.400	Mus_pahari
ENSMGAG00000002119	SBDS	100	88.400	MGP_SPRETEiJ_G0028798	Sbds	100	88.400	Mus_spretus
ENSMGAG00000002119	SBDS	67	89.286	ENSMPUG00000016192	SBDS	97	89.286	Mustela_putorius_furo
ENSMGAG00000002119	SBDS	73	87.363	ENSMLUG00000013575	SBDS	100	87.363	Myotis_lucifugus
ENSMGAG00000002119	SBDS	100	89.600	ENSNGAG00000012093	Sbds	100	89.600	Nannospalax_galili
ENSMGAG00000002119	SBDS	99	85.141	ENSNBRG00000017027	sbds	100	85.141	Neolamprologus_brichardi
ENSMGAG00000002119	SBDS	100	89.200	ENSNLEG00000013288	SBDS	100	89.200	Nomascus_leucogenys
ENSMGAG00000002119	SBDS	100	87.200	ENSOPRG00000008721	SBDS	100	87.200	Ochotona_princeps
ENSMGAG00000002119	SBDS	99	67.470	ENSODEG00000000137	-	85	70.400	Octodon_degus
ENSMGAG00000002119	SBDS	100	80.000	ENSODEG00000019253	-	84	80.000	Octodon_degus
ENSMGAG00000002119	SBDS	99	71.084	ENSODEG00000001116	-	99	71.084	Octodon_degus
ENSMGAG00000002119	SBDS	99	84.337	ENSONIG00000005874	sbds	100	84.337	Oreochromis_niloticus
ENSMGAG00000002119	SBDS	83	87.923	ENSOANG00000007674	-	100	87.923	Ornithorhynchus_anatinus
ENSMGAG00000002119	SBDS	100	88.400	ENSOCUG00000003170	SBDS	100	88.400	Oryctolagus_cuniculus
ENSMGAG00000002119	SBDS	99	81.526	ENSORLG00000023489	sbds	100	81.526	Oryzias_latipes
ENSMGAG00000002119	SBDS	99	81.124	ENSORLG00020019282	sbds	100	81.124	Oryzias_latipes_hni
ENSMGAG00000002119	SBDS	99	81.124	ENSORLG00015008005	sbds	100	81.124	Oryzias_latipes_hsok
ENSMGAG00000002119	SBDS	99	82.329	ENSOMEG00000022747	sbds	100	82.329	Oryzias_melastigma
ENSMGAG00000002119	SBDS	100	75.600	ENSOGAG00000015036	-	100	75.600	Otolemur_garnettii
ENSMGAG00000002119	SBDS	100	89.200	ENSOGAG00000009011	-	100	89.200	Otolemur_garnettii
ENSMGAG00000002119	SBDS	100	89.600	ENSOARG00000010609	SBDS	100	89.600	Ovis_aries
ENSMGAG00000002119	SBDS	100	88.400	ENSPPAG00000043889	-	100	88.400	Pan_paniscus
ENSMGAG00000002119	SBDS	100	88.800	ENSPPRG00000002307	SBDS	100	88.800	Panthera_pardus
ENSMGAG00000002119	SBDS	100	88.800	ENSPTIG00000021308	SBDS	100	88.800	Panthera_tigris_altaica
ENSMGAG00000002119	SBDS	87	87.097	ENSPTRG00000048174	-	96	87.097	Pan_troglodytes
ENSMGAG00000002119	SBDS	100	76.000	ENSPTRG00000050835	-	100	76.000	Pan_troglodytes
ENSMGAG00000002119	SBDS	100	89.200	ENSPTRG00000019254	SBDS	100	89.200	Pan_troglodytes
ENSMGAG00000002119	SBDS	100	75.600	ENSPTRG00000047744	-	100	75.600	Pan_troglodytes
ENSMGAG00000002119	SBDS	100	88.800	ENSPANG00000004078	SBDS	100	88.800	Papio_anubis
ENSMGAG00000002119	SBDS	100	86.400	ENSPKIG00000006489	sbds	100	86.400	Paramormyrops_kingsleyae
ENSMGAG00000002119	SBDS	83	94.231	ENSPSIG00000014603	SBDS	100	94.231	Pelodiscus_sinensis
ENSMGAG00000002119	SBDS	99	83.133	ENSPMGG00000004246	sbds	100	83.133	Periophthalmus_magnuspinnatus
ENSMGAG00000002119	SBDS	100	89.200	ENSPEMG00000008728	Sbds	100	89.200	Peromyscus_maniculatus_bairdii
ENSMGAG00000002119	SBDS	100	90.000	ENSPCIG00000029718	SBDS	100	90.000	Phascolarctos_cinereus
ENSMGAG00000002119	SBDS	99	82.731	ENSPFOG00000015837	sbds	100	82.731	Poecilia_formosa
ENSMGAG00000002119	SBDS	99	83.133	ENSPLAG00000003641	sbds	100	83.133	Poecilia_latipinna
ENSMGAG00000002119	SBDS	99	82.731	ENSPMEG00000019483	sbds	100	82.731	Poecilia_mexicana
ENSMGAG00000002119	SBDS	99	82.731	ENSPREG00000018758	sbds	100	82.731	Poecilia_reticulata
ENSMGAG00000002119	SBDS	100	89.200	ENSPPYG00000017513	SBDS	100	89.200	Pongo_abelii
ENSMGAG00000002119	SBDS	100	89.200	ENSPCOG00000021098	SBDS	100	89.200	Propithecus_coquereli
ENSMGAG00000002119	SBDS	100	88.800	ENSPVAG00000009369	SBDS	100	88.800	Pteropus_vampyrus
ENSMGAG00000002119	SBDS	99	84.739	ENSPNYG00000022403	sbds	100	84.739	Pundamilia_nyererei
ENSMGAG00000002119	SBDS	100	86.400	ENSPNAG00000001120	sbds	100	86.400	Pygocentrus_nattereri
ENSMGAG00000002119	SBDS	100	88.400	ENSRNOG00000000888	Sbds	100	88.400	Rattus_norvegicus
ENSMGAG00000002119	SBDS	100	89.200	ENSRBIG00000035557	SBDS	100	89.200	Rhinopithecus_bieti
ENSMGAG00000002119	SBDS	100	89.200	ENSRROG00000040842	-	100	89.200	Rhinopithecus_roxellana
ENSMGAG00000002119	SBDS	100	72.400	ENSRROG00000041986	-	100	70.400	Rhinopithecus_roxellana
ENSMGAG00000002119	SBDS	96	43.089	YLR022C	-	71	48.588	Saccharomyces_cerevisiae
ENSMGAG00000002119	SBDS	93	87.500	ENSSBOG00000022460	SBDS	100	87.500	Saimiri_boliviensis_boliviensis
ENSMGAG00000002119	SBDS	100	78.800	ENSSHAG00000010263	SBDS	100	78.800	Sarcophilus_harrisii
ENSMGAG00000002119	SBDS	100	88.800	ENSSFOG00015001108	sbds	100	88.800	Scleropages_formosus
ENSMGAG00000002119	SBDS	99	82.329	ENSSMAG00000020506	sbds	100	82.329	Scophthalmus_maximus
ENSMGAG00000002119	SBDS	99	83.936	ENSSDUG00000001528	sbds	100	83.936	Seriola_dumerili
ENSMGAG00000002119	SBDS	99	83.936	ENSSLDG00000003659	sbds	100	83.936	Seriola_lalandi_dorsalis
ENSMGAG00000002119	SBDS	61	89.542	ENSSARG00000013132	-	100	89.542	Sorex_araneus
ENSMGAG00000002119	SBDS	73	88.235	ENSSARG00000001899	-	73	88.235	Sorex_araneus
ENSMGAG00000002119	SBDS	100	90.000	ENSSPUG00000002699	SBDS	100	90.000	Sphenodon_punctatus
ENSMGAG00000002119	SBDS	99	84.337	ENSSPAG00000016419	sbds	100	77.200	Stegastes_partitus
ENSMGAG00000002119	SBDS	100	89.600	ENSSSCG00000007732	SBDS	100	89.600	Sus_scrofa
ENSMGAG00000002119	SBDS	66	94.512	ENSTGUG00000003426	SBDS	99	94.512	Taeniopygia_guttata
ENSMGAG00000002119	SBDS	99	83.133	ENSTRUG00000021443	sbds	100	83.133	Takifugu_rubripes
ENSMGAG00000002119	SBDS	99	83.133	ENSTNIG00000019000	sbds	100	83.133	Tetraodon_nigroviridis
ENSMGAG00000002119	SBDS	83	75.481	ENSTBEG00000001178	SBDS	100	75.481	Tupaia_belangeri
ENSMGAG00000002119	SBDS	100	70.400	ENSTTRG00000003921	SBDS	100	70.400	Tursiops_truncatus
ENSMGAG00000002119	SBDS	100	89.200	ENSUAMG00000001326	SBDS	100	89.200	Ursus_americanus
ENSMGAG00000002119	SBDS	100	89.200	ENSUMAG00000015353	SBDS	100	89.200	Ursus_maritimus
ENSMGAG00000002119	SBDS	100	89.200	ENSVVUG00000016478	SBDS	100	89.200	Vulpes_vulpes
ENSMGAG00000002119	SBDS	100	86.800	ENSXETG00000010093	sbds	100	86.800	Xenopus_tropicalis
ENSMGAG00000002119	SBDS	99	75.502	ENSXCOG00000010639	sbds	100	75.502	Xiphophorus_couchianus
ENSMGAG00000002119	SBDS	99	83.534	ENSXMAG00000006065	sbds	100	83.534	Xiphophorus_maculatus