EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000002617 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 22257 bases
Position: chr12:1732943-1755199
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000018866	FDF	PF09532.10	4.3e-15	1	1
ENSMGAP00000002230	FDF	PF09532.10	8.1e-15	1	1
ENSMGAP00000002230	LSM14	PF12701.7	5.4e-10	1	1
ENSMGAP00000018866	LSM14	PF12701.7	6.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000002905	EDC3-201	2344	-	ENSMGAP00000002230	506 (aa)	-	G1MUK9
ENSMGAT00000019944	EDC3-202	2344	-	ENSMGAP00000018866	506 (aa)	-	G3UT31

Gene Model

Click here to download ENSMGAG00000002617's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000002617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000002617	EDC3	100	87.598	ENSG00000179151	EDC3	100	98.148	Homo_sapiens
ENSMGAG00000002617	EDC3	100	69.941	ENSAPOG00000010791	edc3	100	69.941	Acanthochromis_polyacanthus
ENSMGAG00000002617	EDC3	99	55.922	ENSAPOG00000008655	EDC3	99	56.615	Acanthochromis_polyacanthus
ENSMGAG00000002617	EDC3	100	87.008	ENSAMEG00000008963	EDC3	100	87.008	Ailuropoda_melanoleuca
ENSMGAG00000002617	EDC3	99	59.570	ENSACIG00000005330	EDC3	99	59.570	Amphilophus_citrinellus
ENSMGAG00000002617	EDC3	100	69.231	ENSACIG00000017751	edc3	100	69.231	Amphilophus_citrinellus
ENSMGAG00000002617	EDC3	100	69.941	ENSAOCG00000005431	edc3	100	69.941	Amphiprion_ocellaris
ENSMGAG00000002617	EDC3	99	59.180	ENSAOCG00000009103	-	99	59.180	Amphiprion_ocellaris
ENSMGAG00000002617	EDC3	100	69.941	ENSAPEG00000000968	edc3	100	69.941	Amphiprion_percula
ENSMGAG00000002617	EDC3	99	58.869	ENSAPEG00000007841	EDC3	99	58.869	Amphiprion_percula
ENSMGAG00000002617	EDC3	100	70.414	ENSATEG00000015505	edc3	100	70.414	Anabas_testudineus
ENSMGAG00000002617	EDC3	100	58.925	ENSATEG00000004205	-	100	58.925	Anabas_testudineus
ENSMGAG00000002617	EDC3	90	97.351	ENSAPLG00000008957	EDC3	100	97.351	Anas_platyrhynchos
ENSMGAG00000002617	EDC3	78	88.889	ENSACAG00000000460	-	100	88.889	Anolis_carolinensis
ENSMGAG00000002617	EDC3	100	87.795	ENSANAG00000024078	EDC3	100	87.795	Aotus_nancymaae
ENSMGAG00000002617	EDC3	99	60.156	ENSACLG00000018776	-	99	60.156	Astatotilapia_calliptera
ENSMGAG00000002617	EDC3	100	68.245	ENSACLG00000007232	edc3	100	68.245	Astatotilapia_calliptera
ENSMGAG00000002617	EDC3	100	71.037	ENSAMXG00000001589	edc3	100	71.037	Astyanax_mexicanus
ENSMGAG00000002617	EDC3	100	87.402	ENSBTAG00000007308	EDC3	100	87.402	Bos_taurus
ENSMGAG00000002617	EDC3	100	87.795	ENSCJAG00000017681	EDC3	100	87.795	Callithrix_jacchus
ENSMGAG00000002617	EDC3	100	87.205	ENSCAFG00000017935	EDC3	100	87.205	Canis_familiaris
ENSMGAG00000002617	EDC3	100	87.205	ENSCAFG00020003909	EDC3	100	87.205	Canis_lupus_dingo
ENSMGAG00000002617	EDC3	100	87.598	ENSCHIG00000023658	EDC3	100	87.598	Capra_hircus
ENSMGAG00000002617	EDC3	100	87.795	ENSTSYG00000004822	EDC3	100	87.795	Carlito_syrichta
ENSMGAG00000002617	EDC3	100	86.811	ENSCPOG00000015595	EDC3	100	86.811	Cavia_porcellus
ENSMGAG00000002617	EDC3	100	87.992	ENSCCAG00000021663	EDC3	100	87.992	Cebus_capucinus
ENSMGAG00000002617	EDC3	100	87.992	ENSCATG00000037511	EDC3	100	87.992	Cercocebus_atys
ENSMGAG00000002617	EDC3	100	86.220	ENSCLAG00000005700	EDC3	100	86.220	Chinchilla_lanigera
ENSMGAG00000002617	EDC3	100	87.992	ENSCSAG00000014239	EDC3	100	87.992	Chlorocebus_sabaeus
ENSMGAG00000002617	EDC3	100	93.110	ENSCPBG00000024239	EDC3	100	93.110	Chrysemys_picta_bellii
ENSMGAG00000002617	EDC3	100	37.838	ENSCING00000022142	-	99	37.984	Ciona_intestinalis
ENSMGAG00000002617	EDC3	100	87.992	ENSCANG00000028699	EDC3	100	87.992	Colobus_angolensis_palliatus
ENSMGAG00000002617	EDC3	100	88.189	ENSCGRG00001013874	Edc3	100	88.189	Cricetulus_griseus_chok1gshd
ENSMGAG00000002617	EDC3	100	88.189	ENSCGRG00000011885	Edc3	100	88.189	Cricetulus_griseus_crigri
ENSMGAG00000002617	EDC3	99	70.553	ENSCSEG00000012996	edc3	99	70.553	Cynoglossus_semilaevis
ENSMGAG00000002617	EDC3	100	69.625	ENSCVAG00000008023	edc3	100	69.625	Cyprinodon_variegatus
ENSMGAG00000002617	EDC3	99	69.412	ENSDARG00000051931	edc3	99	69.608	Danio_rerio
ENSMGAG00000002617	EDC3	100	77.476	ENSDNOG00000030661	EDC3	100	77.476	Dasypus_novemcinctus
ENSMGAG00000002617	EDC3	64	100.000	ENSETEG00000002398	-	64	100.000	Echinops_telfairi
ENSMGAG00000002617	EDC3	100	87.992	ENSEASG00005005071	EDC3	100	87.992	Equus_asinus_asinus
ENSMGAG00000002617	EDC3	100	87.992	ENSECAG00000017994	EDC3	100	87.992	Equus_caballus
ENSMGAG00000002617	EDC3	100	62.279	ENSELUG00000007607	EDC3	100	62.279	Esox_lucius
ENSMGAG00000002617	EDC3	100	66.536	ENSELUG00000005794	edc3	100	66.536	Esox_lucius
ENSMGAG00000002617	EDC3	100	86.614	ENSFCAG00000002014	EDC3	100	86.614	Felis_catus
ENSMGAG00000002617	EDC3	98	91.751	ENSFALG00000004543	EDC3	96	91.751	Ficedula_albicollis
ENSMGAG00000002617	EDC3	100	86.614	ENSFDAG00000012582	EDC3	100	86.614	Fukomys_damarensis
ENSMGAG00000002617	EDC3	100	69.822	ENSFHEG00000009375	edc3	100	69.822	Fundulus_heteroclitus
ENSMGAG00000002617	EDC3	100	68.824	ENSGMOG00000002715	edc3	100	68.824	Gadus_morhua
ENSMGAG00000002617	EDC3	100	99.012	ENSGALG00000040181	EDC3	100	99.012	Gallus_gallus
ENSMGAG00000002617	EDC3	100	68.245	ENSGAFG00000014433	edc3	100	68.047	Gambusia_affinis
ENSMGAG00000002617	EDC3	100	68.836	ENSGACG00000009783	edc3	100	68.836	Gasterosteus_aculeatus
ENSMGAG00000002617	EDC3	99	56.480	ENSGACG00000014671	EDC3	99	56.731	Gasterosteus_aculeatus
ENSMGAG00000002617	EDC3	100	93.097	ENSGAGG00000023477	EDC3	100	93.097	Gopherus_agassizii
ENSMGAG00000002617	EDC3	100	87.598	ENSGGOG00000003552	EDC3	100	87.598	Gorilla_gorilla
ENSMGAG00000002617	EDC3	100	68.245	ENSHBUG00000003635	edc3	100	68.245	Haplochromis_burtoni
ENSMGAG00000002617	EDC3	99	60.156	ENSHBUG00000020817	EDC3	99	60.156	Haplochromis_burtoni
ENSMGAG00000002617	EDC3	100	67.191	ENSHCOG00000016834	edc3	100	67.976	Hippocampus_comes
ENSMGAG00000002617	EDC3	99	69.625	ENSIPUG00000005695	edc3	100	69.625	Ictalurus_punctatus
ENSMGAG00000002617	EDC3	100	87.992	ENSSTOG00000013936	EDC3	100	87.992	Ictidomys_tridecemlineatus
ENSMGAG00000002617	EDC3	100	87.598	ENSJJAG00000008074	Edc3	100	87.598	Jaculus_jaculus
ENSMGAG00000002617	EDC3	99	56.917	ENSKMAG00000001987	EDC3	99	56.917	Kryptolebias_marmoratus
ENSMGAG00000002617	EDC3	100	69.231	ENSKMAG00000001243	edc3	100	69.412	Kryptolebias_marmoratus
ENSMGAG00000002617	EDC3	100	69.155	ENSLBEG00000013435	edc3	99	69.155	Labrus_bergylta
ENSMGAG00000002617	EDC3	100	57.895	ENSLBEG00000017984	EDC3	100	57.895	Labrus_bergylta
ENSMGAG00000002617	EDC3	100	79.377	ENSLACG00000014149	EDC3	100	79.377	Latimeria_chalumnae
ENSMGAG00000002617	EDC3	100	67.906	ENSLOCG00000014625	edc3	100	68.493	Lepisosteus_oculatus
ENSMGAG00000002617	EDC3	100	87.968	ENSLAFG00000002992	EDC3	100	87.968	Loxodonta_africana
ENSMGAG00000002617	EDC3	100	87.598	ENSMFAG00000043074	EDC3	100	87.598	Macaca_fascicularis
ENSMGAG00000002617	EDC3	100	87.598	ENSMMUG00000011071	EDC3	100	87.598	Macaca_mulatta
ENSMGAG00000002617	EDC3	100	87.598	ENSMNEG00000035316	EDC3	100	87.598	Macaca_nemestrina
ENSMGAG00000002617	EDC3	100	87.992	ENSMLEG00000030372	EDC3	100	87.992	Mandrillus_leucophaeus
ENSMGAG00000002617	EDC3	100	57.617	ENSMAMG00000005423	-	100	57.617	Mastacembelus_armatus
ENSMGAG00000002617	EDC3	100	69.428	ENSMAMG00000000505	edc3	100	69.428	Mastacembelus_armatus
ENSMGAG00000002617	EDC3	100	68.245	ENSMZEG00005004892	edc3	100	68.245	Maylandia_zebra
ENSMGAG00000002617	EDC3	99	60.196	ENSMZEG00005005654	EDC3	99	60.196	Maylandia_zebra
ENSMGAG00000002617	EDC3	100	88.189	ENSMICG00000043190	EDC3	100	88.189	Microcebus_murinus
ENSMGAG00000002617	EDC3	100	87.795	ENSMOCG00000016205	Edc3	100	87.795	Microtus_ochrogaster
ENSMGAG00000002617	EDC3	99	69.291	ENSMMOG00000012278	edc3	99	69.763	Mola_mola
ENSMGAG00000002617	EDC3	100	89.567	ENSMODG00000009442	EDC3	100	89.567	Monodelphis_domestica
ENSMGAG00000002617	EDC3	100	70.217	ENSMALG00000008658	edc3	100	70.217	Monopterus_albus
ENSMGAG00000002617	EDC3	100	87.008	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSMGAG00000002617	EDC3	100	87.008	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSMGAG00000002617	EDC3	100	87.205	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSMGAG00000002617	EDC3	100	87.205	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSMGAG00000002617	EDC3	100	87.402	ENSMPUG00000017293	EDC3	100	87.402	Mustela_putorius_furo
ENSMGAG00000002617	EDC3	100	86.667	ENSMLUG00000016382	EDC3	100	86.667	Myotis_lucifugus
ENSMGAG00000002617	EDC3	100	87.205	ENSNGAG00000010923	Edc3	100	87.205	Nannospalax_galili
ENSMGAG00000002617	EDC3	100	67.653	ENSNBRG00000002434	edc3	100	67.653	Neolamprologus_brichardi
ENSMGAG00000002617	EDC3	99	60.352	ENSNBRG00000007881	EDC3	99	60.352	Neolamprologus_brichardi
ENSMGAG00000002617	EDC3	100	77.953	ENSNLEG00000014577	EDC3	100	77.953	Nomascus_leucogenys
ENSMGAG00000002617	EDC3	100	89.526	ENSMEUG00000009077	EDC3	100	89.526	Notamacropus_eugenii
ENSMGAG00000002617	EDC3	79	98.148	ENSOPRG00000009540	-	79	98.148	Ochotona_princeps
ENSMGAG00000002617	EDC3	99	59.768	ENSONIG00000002932	-	99	59.768	Oreochromis_niloticus
ENSMGAG00000002617	EDC3	100	68.442	ENSONIG00000008434	edc3	100	68.442	Oreochromis_niloticus
ENSMGAG00000002617	EDC3	78	86.616	ENSOCUG00000017740	EDC3	86	86.616	Oryctolagus_cuniculus
ENSMGAG00000002617	EDC3	100	68.442	ENSORLG00000004883	edc3	100	68.442	Oryzias_latipes
ENSMGAG00000002617	EDC3	99	57.087	ENSORLG00000014399	-	98	57.087	Oryzias_latipes
ENSMGAG00000002617	EDC3	100	68.047	ENSORLG00020012262	edc3	100	68.047	Oryzias_latipes_hni
ENSMGAG00000002617	EDC3	99	56.863	ENSORLG00020019446	-	99	57.087	Oryzias_latipes_hni
ENSMGAG00000002617	EDC3	99	56.496	ENSORLG00015017635	-	95	56.496	Oryzias_latipes_hsok
ENSMGAG00000002617	EDC3	100	68.047	ENSORLG00015005634	edc3	100	68.047	Oryzias_latipes_hsok
ENSMGAG00000002617	EDC3	99	57.087	ENSOMEG00000017354	EDC3	99	57.087	Oryzias_melastigma
ENSMGAG00000002617	EDC3	100	69.625	ENSOMEG00000014026	edc3	100	69.625	Oryzias_melastigma
ENSMGAG00000002617	EDC3	100	87.402	ENSOGAG00000014441	EDC3	100	88.189	Otolemur_garnettii
ENSMGAG00000002617	EDC3	100	87.255	ENSOARG00000003476	EDC3	100	87.255	Ovis_aries
ENSMGAG00000002617	EDC3	100	87.598	ENSPPAG00000040143	EDC3	100	87.598	Pan_paniscus
ENSMGAG00000002617	EDC3	100	86.811	ENSPPRG00000006257	EDC3	100	86.811	Panthera_pardus
ENSMGAG00000002617	EDC3	100	86.811	ENSPTIG00000017424	EDC3	100	86.811	Panthera_tigris_altaica
ENSMGAG00000002617	EDC3	100	87.598	ENSPTRG00000007279	EDC3	100	87.598	Pan_troglodytes
ENSMGAG00000002617	EDC3	100	87.992	ENSPANG00000015997	EDC3	100	87.992	Papio_anubis
ENSMGAG00000002617	EDC3	100	68.102	ENSPKIG00000004416	edc3	100	69.080	Paramormyrops_kingsleyae
ENSMGAG00000002617	EDC3	99	66.732	ENSPKIG00000019810	EDC3	99	66.732	Paramormyrops_kingsleyae
ENSMGAG00000002617	EDC3	100	85.827	ENSPSIG00000008474	EDC3	100	85.827	Pelodiscus_sinensis
ENSMGAG00000002617	EDC3	100	68.173	ENSPMGG00000007223	edc3	100	68.173	Periophthalmus_magnuspinnatus
ENSMGAG00000002617	EDC3	100	88.189	ENSPEMG00000015260	Edc3	100	88.189	Peromyscus_maniculatus_bairdii
ENSMGAG00000002617	EDC3	100	88.735	ENSPCIG00000006276	EDC3	70	88.735	Phascolarctos_cinereus
ENSMGAG00000002617	EDC3	100	68.836	ENSPFOG00000012204	edc3	100	68.836	Poecilia_formosa
ENSMGAG00000002617	EDC3	100	68.836	ENSPLAG00000014420	edc3	100	68.836	Poecilia_latipinna
ENSMGAG00000002617	EDC3	100	68.836	ENSPMEG00000023289	edc3	100	68.836	Poecilia_mexicana
ENSMGAG00000002617	EDC3	100	68.836	ENSPREG00000016022	edc3	100	68.836	Poecilia_reticulata
ENSMGAG00000002617	EDC3	100	86.417	ENSPPYG00000006642	EDC3	100	86.417	Pongo_abelii
ENSMGAG00000002617	EDC3	88	98.148	ENSPCAG00000002802	EDC3	88	98.148	Procavia_capensis
ENSMGAG00000002617	EDC3	100	87.992	ENSPCOG00000013364	EDC3	100	87.992	Propithecus_coquereli
ENSMGAG00000002617	EDC3	100	87.008	ENSPVAG00000014733	EDC3	100	87.008	Pteropus_vampyrus
ENSMGAG00000002617	EDC3	100	68.245	ENSPNYG00000021797	edc3	100	68.245	Pundamilia_nyererei
ENSMGAG00000002617	EDC3	99	60.156	ENSPNYG00000009669	EDC3	99	60.156	Pundamilia_nyererei
ENSMGAG00000002617	EDC3	100	69.961	ENSPNAG00000019657	edc3	100	69.961	Pygocentrus_nattereri
ENSMGAG00000002617	EDC3	99	87.129	ENSRNOG00000019579	Edc3	99	87.921	Rattus_norvegicus
ENSMGAG00000002617	EDC3	100	87.795	ENSRBIG00000019488	EDC3	100	87.795	Rhinopithecus_bieti
ENSMGAG00000002617	EDC3	100	87.795	ENSRROG00000034959	EDC3	100	87.795	Rhinopithecus_roxellana
ENSMGAG00000002617	EDC3	100	88.189	ENSSBOG00000004896	EDC3	100	88.189	Saimiri_boliviensis_boliviensis
ENSMGAG00000002617	EDC3	96	89.117	ENSSHAG00000015075	EDC3	95	89.117	Sarcophilus_harrisii
ENSMGAG00000002617	EDC3	99	71.569	ENSSFOG00015016939	edc3	99	71.765	Scleropages_formosus
ENSMGAG00000002617	EDC3	100	64.648	ENSSFOG00015002439	edc3	100	64.648	Scleropages_formosus
ENSMGAG00000002617	EDC3	100	69.625	ENSSMAG00000010695	edc3	100	69.625	Scophthalmus_maximus
ENSMGAG00000002617	EDC3	99	57.339	ENSSMAG00000010176	-	99	57.339	Scophthalmus_maximus
ENSMGAG00000002617	EDC3	99	60.547	ENSSDUG00000007671	EDC3	99	60.547	Seriola_dumerili
ENSMGAG00000002617	EDC3	100	69.822	ENSSDUG00000021844	edc3	100	70.217	Seriola_dumerili
ENSMGAG00000002617	EDC3	100	69.822	ENSSLDG00000022046	edc3	100	70.217	Seriola_lalandi_dorsalis
ENSMGAG00000002617	EDC3	80	89.516	ENSSARG00000003907	EDC3	80	89.516	Sorex_araneus
ENSMGAG00000002617	EDC3	100	92.323	ENSSPUG00000008232	EDC3	100	92.323	Sphenodon_punctatus
ENSMGAG00000002617	EDC3	99	58.039	ENSSPAG00000020327	EDC3	99	58.627	Stegastes_partitus
ENSMGAG00000002617	EDC3	100	70.217	ENSSPAG00000010009	edc3	100	70.217	Stegastes_partitus
ENSMGAG00000002617	EDC3	100	87.598	ENSSSCG00000001903	EDC3	100	87.598	Sus_scrofa
ENSMGAG00000002617	EDC3	100	96.443	ENSTGUG00000004007	EDC3	100	96.443	Taeniopygia_guttata
ENSMGAG00000002617	EDC3	100	70.217	ENSTRUG00000017078	edc3	100	70.217	Takifugu_rubripes
ENSMGAG00000002617	EDC3	100	69.352	ENSTNIG00000016047	edc3	100	69.352	Tetraodon_nigroviridis
ENSMGAG00000002617	EDC3	100	87.771	ENSTTRG00000007990	EDC3	100	87.771	Tursiops_truncatus
ENSMGAG00000002617	EDC3	100	87.008	ENSUAMG00000026710	-	100	87.008	Ursus_americanus
ENSMGAG00000002617	EDC3	100	87.008	ENSUMAG00000005006	EDC3	96	87.008	Ursus_maritimus
ENSMGAG00000002617	EDC3	79	85.185	ENSVPAG00000003499	-	79	85.185	Vicugna_pacos
ENSMGAG00000002617	EDC3	100	87.205	ENSVVUG00000018601	EDC3	100	87.205	Vulpes_vulpes
ENSMGAG00000002617	EDC3	68	81.897	ENSXETG00000010622	edc3	99	83.046	Xenopus_tropicalis
ENSMGAG00000002617	EDC3	100	69.231	ENSXMAG00000007377	edc3	100	69.231	Xiphophorus_maculatus