EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000003196 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 42284 bases
Position: chr2:3566723-3609006
Accession: 12836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000002959	XRN_N	PF03159.18	3.1e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000003649	XRN2-201	2868	-	ENSMGAP00000002959	956 (aa)	-	G1MW63

Gene Model

Click here to download ENSMGAG00000003196's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG
mgp03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003196	XRN2	99	81.042	ENSG00000088930	XRN2	99	81.042	Homo_sapiens
ENSMGAG00000003196	XRN2	97	70.394	ENSAPOG00000009818	xrn2	99	68.426	Acanthochromis_polyacanthus
ENSMGAG00000003196	XRN2	99	81.354	ENSAMEG00000012581	XRN2	99	81.354	Ailuropoda_melanoleuca
ENSMGAG00000003196	XRN2	90	70.455	ENSACIG00000015047	xrn2	95	75.000	Amphilophus_citrinellus
ENSMGAG00000003196	XRN2	90	74.625	ENSAOCG00000023632	xrn2	99	68.832	Amphiprion_ocellaris
ENSMGAG00000003196	XRN2	97	70.607	ENSAPEG00000014871	xrn2	99	68.731	Amphiprion_percula
ENSMGAG00000003196	XRN2	90	74.053	ENSATEG00000001273	xrn2	98	70.347	Anabas_testudineus
ENSMGAG00000003196	XRN2	95	96.476	ENSAPLG00000013869	XRN2	99	94.731	Anas_platyrhynchos
ENSMGAG00000003196	XRN2	99	81.405	ENSACAG00000005565	XRN2	99	81.405	Anolis_carolinensis
ENSMGAG00000003196	XRN2	99	81.354	ENSANAG00000020126	XRN2	99	81.354	Aotus_nancymaae
ENSMGAG00000003196	XRN2	90	72.120	ENSACLG00000010522	xrn2	96	75.207	Astatotilapia_calliptera
ENSMGAG00000003196	XRN2	97	71.668	ENSAMXG00000018301	xrn2	98	71.668	Astyanax_mexicanus
ENSMGAG00000003196	XRN2	99	80.625	ENSBTAG00000011304	XRN2	99	80.625	Bos_taurus
ENSMGAG00000003196	XRN2	86	54.790	WBGene00006964	xrn-2	88	54.378	Caenorhabditis_elegans
ENSMGAG00000003196	XRN2	99	81.042	ENSCJAG00000005611	XRN2	99	81.042	Callithrix_jacchus
ENSMGAG00000003196	XRN2	99	81.667	ENSCAFG00000005185	XRN2	99	81.667	Canis_familiaris
ENSMGAG00000003196	XRN2	99	81.667	ENSCAFG00020027479	XRN2	99	81.667	Canis_lupus_dingo
ENSMGAG00000003196	XRN2	98	81.847	ENSCHIG00000006921	XRN2	99	80.729	Capra_hircus
ENSMGAG00000003196	XRN2	99	80.625	ENSTSYG00000008315	XRN2	99	80.625	Carlito_syrichta
ENSMGAG00000003196	XRN2	97	68.877	ENSCAPG00000010773	XRN2	99	67.701	Cavia_aperea
ENSMGAG00000003196	XRN2	99	81.250	ENSCPOG00000009407	XRN2	99	81.250	Cavia_porcellus
ENSMGAG00000003196	XRN2	99	81.250	ENSCATG00000040350	XRN2	98	82.781	Cercocebus_atys
ENSMGAG00000003196	XRN2	99	81.790	ENSCLAG00000013419	XRN2	99	81.790	Chinchilla_lanigera
ENSMGAG00000003196	XRN2	99	81.250	ENSCSAG00000011094	XRN2	99	81.250	Chlorocebus_sabaeus
ENSMGAG00000003196	XRN2	68	93.548	ENSCHOG00000013404	XRN2	70	93.548	Choloepus_hoffmanni
ENSMGAG00000003196	XRN2	98	88.017	ENSCPBG00000023533	XRN2	99	86.994	Chrysemys_picta_bellii
ENSMGAG00000003196	XRN2	86	59.595	ENSCING00000022336	-	100	60.072	Ciona_intestinalis
ENSMGAG00000003196	XRN2	87	59.096	ENSCSAVG00000011217	-	100	61.509	Ciona_savignyi
ENSMGAG00000003196	XRN2	99	81.250	ENSCANG00000040240	XRN2	99	81.250	Colobus_angolensis_palliatus
ENSMGAG00000003196	XRN2	98	82.535	ENSCGRG00001010676	Xrn2	99	82.641	Cricetulus_griseus_chok1gshd
ENSMGAG00000003196	XRN2	97	80.535	ENSCGRG00000006378	Xrn2	99	80.642	Cricetulus_griseus_crigri
ENSMGAG00000003196	XRN2	54	73.684	ENSCSEG00000005628	xrn2	100	73.684	Cynoglossus_semilaevis
ENSMGAG00000003196	XRN2	90	70.475	ENSCVAG00000018999	xrn2	98	76.471	Cyprinodon_variegatus
ENSMGAG00000003196	XRN2	89	76.450	ENSDARG00000101900	xrn2	96	79.658	Danio_rerio
ENSMGAG00000003196	XRN2	99	80.625	ENSDNOG00000001895	XRN2	99	80.625	Dasypus_novemcinctus
ENSMGAG00000003196	XRN2	99	80.208	ENSDORG00000005434	Xrn2	99	80.208	Dipodomys_ordii
ENSMGAG00000003196	XRN2	86	55.018	FBgn0031868	Rat1	89	54.900	Drosophila_melanogaster
ENSMGAG00000003196	XRN2	99	71.220	ENSETEG00000001740	XRN2	99	71.011	Echinops_telfairi
ENSMGAG00000003196	XRN2	84	70.361	ENSEBUG00000016136	xrn2	99	71.574	Eptatretus_burgeri
ENSMGAG00000003196	XRN2	99	81.042	ENSEASG00005002484	XRN2	99	81.042	Equus_asinus_asinus
ENSMGAG00000003196	XRN2	99	81.342	ENSECAG00000018988	XRN2	96	95.652	Equus_caballus
ENSMGAG00000003196	XRN2	75	95.652	ENSEEUG00000009265	XRN2	76	95.652	Erinaceus_europaeus
ENSMGAG00000003196	XRN2	90	74.684	ENSELUG00000000552	xrn2	99	70.102	Esox_lucius
ENSMGAG00000003196	XRN2	99	81.250	ENSFCAG00000007970	XRN2	99	81.250	Felis_catus
ENSMGAG00000003196	XRN2	98	93.576	ENSFALG00000004508	XRN2	99	91.946	Ficedula_albicollis
ENSMGAG00000003196	XRN2	99	81.354	ENSFDAG00000016311	XRN2	99	81.354	Fukomys_damarensis
ENSMGAG00000003196	XRN2	54	69.772	ENSFHEG00000013039	xrn2	98	69.772	Fundulus_heteroclitus
ENSMGAG00000003196	XRN2	86	74.213	ENSGMOG00000013436	xrn2	100	74.213	Gadus_morhua
ENSMGAG00000003196	XRN2	99	97.068	ENSGALG00000008372	XRN2	99	97.068	Gallus_gallus
ENSMGAG00000003196	XRN2	90	73.029	ENSGAFG00000014284	xrn2	99	73.029	Gambusia_affinis
ENSMGAG00000003196	XRN2	87	74.580	ENSGACG00000011870	xrn2	96	78.654	Gasterosteus_aculeatus
ENSMGAG00000003196	XRN2	98	88.123	ENSGAGG00000004884	XRN2	99	87.047	Gopherus_agassizii
ENSMGAG00000003196	XRN2	99	81.250	ENSGGOG00000013738	XRN2	99	81.250	Gorilla_gorilla
ENSMGAG00000003196	XRN2	54	72.849	ENSHBUG00000005077	xrn2	96	75.207	Haplochromis_burtoni
ENSMGAG00000003196	XRN2	99	80.312	ENSHGLG00000014831	XRN2	99	80.104	Heterocephalus_glaber_female
ENSMGAG00000003196	XRN2	99	80.312	ENSHGLG00100013130	XRN2	99	80.104	Heterocephalus_glaber_male
ENSMGAG00000003196	XRN2	89	73.848	ENSHCOG00000011994	xrn2	99	68.228	Hippocampus_comes
ENSMGAG00000003196	XRN2	99	68.788	ENSIPUG00000006639	xrn2	99	68.788	Ictalurus_punctatus
ENSMGAG00000003196	XRN2	99	81.667	ENSSTOG00000000589	XRN2	99	81.667	Ictidomys_tridecemlineatus
ENSMGAG00000003196	XRN2	99	81.146	ENSJJAG00000022128	Xrn2	99	81.146	Jaculus_jaculus
ENSMGAG00000003196	XRN2	54	80.388	ENSLBEG00000010041	xrn2	100	80.388	Labrus_bergylta
ENSMGAG00000003196	XRN2	93	75.604	ENSLACG00000008307	XRN2	97	79.752	Latimeria_chalumnae
ENSMGAG00000003196	XRN2	99	71.176	ENSLOCG00000016874	xrn2	100	71.176	Lepisosteus_oculatus
ENSMGAG00000003196	XRN2	99	80.417	ENSLAFG00000014624	XRN2	99	80.417	Loxodonta_africana
ENSMGAG00000003196	XRN2	99	81.250	ENSMFAG00000038122	XRN2	99	81.250	Macaca_fascicularis
ENSMGAG00000003196	XRN2	99	81.250	ENSMMUG00000011405	XRN2	99	81.250	Macaca_mulatta
ENSMGAG00000003196	XRN2	99	81.354	ENSMNEG00000040626	XRN2	99	81.354	Macaca_nemestrina
ENSMGAG00000003196	XRN2	99	81.250	ENSMLEG00000041897	XRN2	99	81.250	Mandrillus_leucophaeus
ENSMGAG00000003196	XRN2	90	74.739	ENSMAMG00000008633	xrn2	97	70.732	Mastacembelus_armatus
ENSMGAG00000003196	XRN2	90	74.078	ENSMZEG00005022362	xrn2	97	74.078	Maylandia_zebra
ENSMGAG00000003196	XRN2	99	81.354	ENSMAUG00000021842	Xrn2	99	81.354	Mesocricetus_auratus
ENSMGAG00000003196	XRN2	99	80.521	ENSMICG00000008126	XRN2	99	80.521	Microcebus_murinus
ENSMGAG00000003196	XRN2	99	81.230	ENSMOCG00000012588	Xrn2	99	81.335	Microtus_ochrogaster
ENSMGAG00000003196	XRN2	90	74.036	ENSMMOG00000017576	xrn2	96	75.047	Mola_mola
ENSMGAG00000003196	XRN2	99	82.150	ENSMODG00000006163	XRN2	99	82.150	Monodelphis_domestica
ENSMGAG00000003196	XRN2	91	71.942	ENSMALG00000011355	xrn2	95	76.571	Monopterus_albus
ENSMGAG00000003196	XRN2	99	81.126	MGP_CAROLIEiJ_G0024400	Xrn2	99	81.126	Mus_caroli
ENSMGAG00000003196	XRN2	99	81.335	ENSMUSG00000027433	Xrn2	99	81.335	Mus_musculus
ENSMGAG00000003196	XRN2	99	81.230	MGP_PahariEiJ_G0025843	Xrn2	99	81.230	Mus_pahari
ENSMGAG00000003196	XRN2	99	81.335	MGP_SPRETEiJ_G0025318	Xrn2	94	89.744	Mus_spretus
ENSMGAG00000003196	XRN2	99	80.041	ENSMPUG00000001198	XRN2	93	80.041	Mustela_putorius_furo
ENSMGAG00000003196	XRN2	99	81.250	ENSMLUG00000001536	XRN2	99	81.250	Myotis_lucifugus
ENSMGAG00000003196	XRN2	99	81.354	ENSNGAG00000018138	Xrn2	99	81.354	Nannospalax_galili
ENSMGAG00000003196	XRN2	90	74.856	ENSNBRG00000008062	xrn2	97	74.856	Neolamprologus_brichardi
ENSMGAG00000003196	XRN2	99	81.146	ENSNLEG00000009991	XRN2	99	81.146	Nomascus_leucogenys
ENSMGAG00000003196	XRN2	63	97.778	ENSMEUG00000008622	-	65	97.778	Notamacropus_eugenii
ENSMGAG00000003196	XRN2	75	74.737	ENSOPRG00000001397	-	77	74.737	Ochotona_princeps
ENSMGAG00000003196	XRN2	99	81.562	ENSODEG00000010745	-	99	81.562	Octodon_degus
ENSMGAG00000003196	XRN2	96	75.244	ENSODEG00000000860	-	98	75.791	Octodon_degus
ENSMGAG00000003196	XRN2	96	71.061	ENSONIG00000018720	xrn2	99	69.650	Oreochromis_niloticus
ENSMGAG00000003196	XRN2	99	81.667	ENSOANG00000015673	XRN2	99	81.667	Ornithorhynchus_anatinus
ENSMGAG00000003196	XRN2	99	81.562	ENSOCUG00000013468	XRN2	99	81.562	Oryctolagus_cuniculus
ENSMGAG00000003196	XRN2	97	69.831	ENSORLG00000017213	xrn2	97	74.194	Oryzias_latipes
ENSMGAG00000003196	XRN2	97	70.476	ENSORLG00020001824	xrn2	99	68.852	Oryzias_latipes_hni
ENSMGAG00000003196	XRN2	97	69.799	ENSORLG00015019747	xrn2	99	68.648	Oryzias_latipes_hsok
ENSMGAG00000003196	XRN2	90	73.733	ENSOMEG00000019820	xrn2	99	68.049	Oryzias_melastigma
ENSMGAG00000003196	XRN2	99	80.957	ENSOGAG00000001068	XRN2	99	80.957	Otolemur_garnettii
ENSMGAG00000003196	XRN2	97	80.493	ENSOARG00000004443	XRN2	99	80.493	Ovis_aries
ENSMGAG00000003196	XRN2	99	81.250	ENSPPAG00000033549	XRN2	99	81.250	Pan_paniscus
ENSMGAG00000003196	XRN2	99	81.250	ENSPPRG00000008732	XRN2	99	81.250	Panthera_pardus
ENSMGAG00000003196	XRN2	97	81.136	ENSPTIG00000015683	XRN2	97	81.136	Panthera_tigris_altaica
ENSMGAG00000003196	XRN2	99	81.250	ENSPTRG00000013308	XRN2	99	81.250	Pan_troglodytes
ENSMGAG00000003196	XRN2	99	81.250	ENSPANG00000018088	XRN2	99	81.250	Papio_anubis
ENSMGAG00000003196	XRN2	94	73.546	ENSPKIG00000016889	xrn2	98	70.924	Paramormyrops_kingsleyae
ENSMGAG00000003196	XRN2	80	89.883	ENSPSIG00000014666	XRN2	100	89.883	Pelodiscus_sinensis
ENSMGAG00000003196	XRN2	99	80.729	ENSPEMG00000000111	Xrn2	99	80.729	Peromyscus_maniculatus_bairdii
ENSMGAG00000003196	XRN2	99	68.383	ENSPFOG00000004182	xrn2	99	69.318	Poecilia_formosa
ENSMGAG00000003196	XRN2	90	73.600	ENSPLAG00000007351	xrn2	97	73.600	Poecilia_latipinna
ENSMGAG00000003196	XRN2	94	67.576	ENSPMEG00000011798	xrn2	99	68.261	Poecilia_mexicana
ENSMGAG00000003196	XRN2	90	73.594	ENSPREG00000012452	xrn2	99	72.402	Poecilia_reticulata
ENSMGAG00000003196	XRN2	99	80.833	ENSPPYG00000010755	XRN2	99	80.833	Pongo_abelii
ENSMGAG00000003196	XRN2	99	76.611	ENSPCAG00000011191	XRN2	99	76.611	Procavia_capensis
ENSMGAG00000003196	XRN2	99	73.958	ENSPCOG00000016468	XRN2	99	73.958	Propithecus_coquereli
ENSMGAG00000003196	XRN2	93	73.201	ENSPVAG00000004596	XRN2	93	73.201	Pteropus_vampyrus
ENSMGAG00000003196	XRN2	90	72.120	ENSPNYG00000001765	xrn2	97	72.120	Pundamilia_nyererei
ENSMGAG00000003196	XRN2	99	70.265	ENSPNAG00000010956	xrn2	99	70.265	Pygocentrus_nattereri
ENSMGAG00000003196	XRN2	99	81.042	ENSRNOG00000011785	Xrn2	99	81.146	Rattus_norvegicus
ENSMGAG00000003196	XRN2	86	86.165	ENSRBIG00000036193	XRN2	100	86.165	Rhinopithecus_bieti
ENSMGAG00000003196	XRN2	99	81.250	ENSRROG00000044400	XRN2	90	81.250	Rhinopithecus_roxellana
ENSMGAG00000003196	XRN2	69	51.461	YOR048C	RAT1	61	53.365	Saccharomyces_cerevisiae
ENSMGAG00000003196	XRN2	99	81.354	ENSSBOG00000021014	XRN2	99	81.354	Saimiri_boliviensis_boliviensis
ENSMGAG00000003196	XRN2	99	71.253	ENSSFOG00015001091	xrn2	99	71.253	Scleropages_formosus
ENSMGAG00000003196	XRN2	90	74.539	ENSSMAG00000007834	xrn2	97	70.042	Scophthalmus_maximus
ENSMGAG00000003196	XRN2	90	71.871	ENSSDUG00000012802	xrn2	99	71.559	Seriola_dumerili
ENSMGAG00000003196	XRN2	92	73.303	ENSSLDG00000021273	xrn2	99	73.303	Seriola_lalandi_dorsalis
ENSMGAG00000003196	XRN2	76	95.652	ENSSARG00000005859	-	76	95.652	Sorex_araneus
ENSMGAG00000003196	XRN2	98	81.722	ENSSPUG00000005485	XRN2	96	81.828	Sphenodon_punctatus
ENSMGAG00000003196	XRN2	90	75.087	ENSSPAG00000016027	xrn2	99	69.325	Stegastes_partitus
ENSMGAG00000003196	XRN2	99	80.312	ENSSSCG00000007109	XRN2	99	80.312	Sus_scrofa
ENSMGAG00000003196	XRN2	98	92.529	ENSTGUG00000007535	XRN2	99	91.023	Taeniopygia_guttata
ENSMGAG00000003196	XRN2	90	73.465	ENSTRUG00000015489	xrn2	93	70.410	Takifugu_rubripes
ENSMGAG00000003196	XRN2	94	72.808	ENSTNIG00000010712	xrn2	98	70.351	Tetraodon_nigroviridis
ENSMGAG00000003196	XRN2	99	80.625	ENSTBEG00000004119	XRN2	99	80.729	Tupaia_belangeri
ENSMGAG00000003196	XRN2	93	86.964	ENSTTRG00000009087	XRN2	93	86.964	Tursiops_truncatus
ENSMGAG00000003196	XRN2	99	81.562	ENSUAMG00000024634	XRN2	99	81.562	Ursus_americanus
ENSMGAG00000003196	XRN2	97	81.243	ENSUMAG00000004012	XRN2	95	81.243	Ursus_maritimus
ENSMGAG00000003196	XRN2	89	75.498	ENSVPAG00000010694	XRN2	91	75.498	Vicugna_pacos
ENSMGAG00000003196	XRN2	99	81.667	ENSVVUG00000012178	XRN2	99	81.667	Vulpes_vulpes
ENSMGAG00000003196	XRN2	99	74.062	ENSXETG00000023501	xrn2	99	74.062	Xenopus_tropicalis
ENSMGAG00000003196	XRN2	90	73.081	ENSXMAG00000000242	xrn2	92	79.277	Xiphophorus_maculatus