EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000003274 (Gene tree)
Gene ID: 100538699
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 24140 bases
Position: chr17:5212596-5236735
Accession: 100538699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000018378	ResIII	PF04851.15	9.2e-08	1	1
ENSMGAP00000003017	ResIII	PF04851.15	9.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000003709	SBNO1-201	5445	XM_003210897	ENSMGAP00000003017	1389 (aa)	XP_003210945	G1MWA8
ENSMGAT00000019075	SBNO1-202	5444	-	ENSMGAP00000018378	1239 (aa)	-	G3URR5

Gene Model

Click here to download ENSMGAG00000003274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000003274	SBNO1	69	68.481	ENSMGAG00000003801	SBNO2	73	68.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003274	SBNO1	100	92.247	ENSG00000139697	SBNO1	100	92.170	Homo_sapiens
ENSMGAG00000003274	SBNO1	83	81.558	ENSAPOG00000003196	sbno1	96	82.092	Acanthochromis_polyacanthus
ENSMGAG00000003274	SBNO1	100	91.840	ENSAMEG00000015151	SBNO1	100	91.762	Ailuropoda_melanoleuca
ENSMGAG00000003274	SBNO1	99	75.248	ENSACIG00000008088	sbno1	98	75.413	Amphilophus_citrinellus
ENSMGAG00000003274	SBNO1	99	75.958	ENSAOCG00000014859	sbno1	97	75.808	Amphiprion_ocellaris
ENSMGAG00000003274	SBNO1	99	75.958	ENSAPEG00000006069	sbno1	97	75.808	Amphiprion_percula
ENSMGAG00000003274	SBNO1	99	76.923	ENSATEG00000006667	sbno1	98	76.660	Anabas_testudineus
ENSMGAG00000003274	SBNO1	100	98.922	ENSAPLG00000015674	SBNO1	100	98.922	Anas_platyrhynchos
ENSMGAG00000003274	SBNO1	100	91.311	ENSACAG00000015441	SBNO1	88	91.239	Anolis_carolinensis
ENSMGAG00000003274	SBNO1	100	91.894	ENSANAG00000029958	-	99	95.298	Aotus_nancymaae
ENSMGAG00000003274	SBNO1	99	75.215	ENSACLG00000024913	sbno1	98	75.127	Astatotilapia_calliptera
ENSMGAG00000003274	SBNO1	99	80.032	ENSAMXG00000019473	sbno1	98	80.291	Astyanax_mexicanus
ENSMGAG00000003274	SBNO1	99	92.370	ENSBTAG00000020505	SBNO1	98	92.313	Bos_taurus
ENSMGAG00000003274	SBNO1	100	91.894	ENSCJAG00000016599	SBNO1	100	91.816	Callithrix_jacchus
ENSMGAG00000003274	SBNO1	100	91.977	ENSCAFG00000007503	SBNO1	97	96.032	Canis_familiaris
ENSMGAG00000003274	SBNO1	100	91.248	ENSCAFG00020015363	SBNO1	99	92.948	Canis_lupus_dingo
ENSMGAG00000003274	SBNO1	99	92.526	ENSCHIG00000008382	SBNO1	97	95.817	Capra_hircus
ENSMGAG00000003274	SBNO1	100	92.324	ENSTSYG00000012749	SBNO1	100	92.247	Carlito_syrichta
ENSMGAG00000003274	SBNO1	96	92.417	ENSCAPG00000000384	SBNO1	99	95.118	Cavia_aperea
ENSMGAG00000003274	SBNO1	100	91.810	ENSCPOG00000008109	SBNO1	99	95.118	Cavia_porcellus
ENSMGAG00000003274	SBNO1	100	87.599	ENSCCAG00000035316	SBNO1	100	87.518	Cebus_capucinus
ENSMGAG00000003274	SBNO1	98	92.053	ENSCATG00000008239	SBNO1	98	95.660	Cercocebus_atys
ENSMGAG00000003274	SBNO1	100	91.894	ENSCLAG00000008995	SBNO1	99	95.479	Chinchilla_lanigera
ENSMGAG00000003274	SBNO1	83	94.047	ENSCSAG00000002064	SBNO1	100	93.869	Chlorocebus_sabaeus
ENSMGAG00000003274	SBNO1	94	94.697	ENSCHOG00000008814	SBNO1	96	88.547	Choloepus_hoffmanni
ENSMGAG00000003274	SBNO1	100	96.112	ENSCPBG00000025968	SBNO1	99	96.112	Chrysemys_picta_bellii
ENSMGAG00000003274	SBNO1	100	87.240	ENSCANG00000042688	-	100	87.016	Colobus_angolensis_palliatus
ENSMGAG00000003274	SBNO1	100	91.601	ENSCGRG00001017470	Sbno1	99	94.213	Cricetulus_griseus_chok1gshd
ENSMGAG00000003274	SBNO1	100	91.601	ENSCGRG00000004756	Sbno1	99	94.213	Cricetulus_griseus_crigri
ENSMGAG00000003274	SBNO1	99	75.106	ENSCSEG00000011919	sbno1	98	75.771	Cynoglossus_semilaevis
ENSMGAG00000003274	SBNO1	99	75.901	ENSCVAG00000007038	sbno1	98	76.314	Cyprinodon_variegatus
ENSMGAG00000003274	SBNO1	99	79.528	ENSDARG00000099080	sbno1	98	79.840	Danio_rerio
ENSMGAG00000003274	SBNO1	100	89.562	ENSDNOG00000017147	SBNO1	98	91.778	Dasypus_novemcinctus
ENSMGAG00000003274	SBNO1	100	85.366	ENSDORG00000015261	Sbno1	84	91.712	Dipodomys_ordii
ENSMGAG00000003274	SBNO1	93	86.207	ENSETEG00000005620	SBNO1	93	86.207	Echinops_telfairi
ENSMGAG00000003274	SBNO1	84	62.942	ENSEBUG00000013823	sbno1	93	62.360	Eptatretus_burgeri
ENSMGAG00000003274	SBNO1	57	88.527	ENSEASG00005012595	-	92	89.124	Equus_asinus_asinus
ENSMGAG00000003274	SBNO1	100	92.324	ENSECAG00000006127	SBNO1	100	92.247	Equus_caballus
ENSMGAG00000003274	SBNO1	83	92.308	ENSEEUG00000003793	SBNO1	83	92.308	Erinaceus_europaeus
ENSMGAG00000003274	SBNO1	99	78.405	ENSELUG00000002886	sbno1	98	78.505	Esox_lucius
ENSMGAG00000003274	SBNO1	99	92.370	ENSFCAG00000015331	SBNO1	99	92.170	Felis_catus
ENSMGAG00000003274	SBNO1	100	98.778	ENSFALG00000009273	SBNO1	100	98.778	Ficedula_albicollis
ENSMGAG00000003274	SBNO1	99	90.230	ENSFDAG00000014232	SBNO1	99	91.123	Fukomys_damarensis
ENSMGAG00000003274	SBNO1	99	76.471	ENSFHEG00000007360	sbno1	98	76.751	Fundulus_heteroclitus
ENSMGAG00000003274	SBNO1	94	79.313	ENSGMOG00000018229	sbno1	98	79.396	Gadus_morhua
ENSMGAG00000003274	SBNO1	100	99.839	ENSGALG00000003392	SBNO1	100	99.839	Gallus_gallus
ENSMGAG00000003274	SBNO1	99	76.575	ENSGAFG00000003960	sbno1	98	76.906	Gambusia_affinis
ENSMGAG00000003274	SBNO1	94	79.224	ENSGACG00000015633	sbno1	98	78.964	Gasterosteus_aculeatus
ENSMGAG00000003274	SBNO1	100	95.392	ENSGAGG00000001065	SBNO1	99	98.011	Gopherus_agassizii
ENSMGAG00000003274	SBNO1	100	92.175	ENSGGOG00000015000	SBNO1	99	95.660	Gorilla_gorilla
ENSMGAG00000003274	SBNO1	99	69.621	ENSHBUG00000011910	sbno1	98	69.448	Haplochromis_burtoni
ENSMGAG00000003274	SBNO1	100	91.750	ENSHGLG00000014165	-	99	95.118	Heterocephalus_glaber_female
ENSMGAG00000003274	SBNO1	93	87.949	ENSHCOG00000003246	sbno1	95	85.771	Hippocampus_comes
ENSMGAG00000003274	SBNO1	99	79.694	ENSIPUG00000015830	Sbno1	98	79.235	Ictalurus_punctatus
ENSMGAG00000003274	SBNO1	100	92.103	ENSSTOG00000023221	SBNO1	99	95.298	Ictidomys_tridecemlineatus
ENSMGAG00000003274	SBNO1	100	92.253	ENSJJAG00000001741	Sbno1	100	91.960	Jaculus_jaculus
ENSMGAG00000003274	SBNO1	99	76.471	ENSKMAG00000009696	sbno1	98	76.636	Kryptolebias_marmoratus
ENSMGAG00000003274	SBNO1	99	76.429	ENSLBEG00000007623	sbno1	98	76.323	Labrus_bergylta
ENSMGAG00000003274	SBNO1	98	85.179	ENSLACG00000017227	SBNO1	99	84.765	Latimeria_chalumnae
ENSMGAG00000003274	SBNO1	99	82.705	ENSLOCG00000005725	sbno1	97	82.918	Lepisosteus_oculatus
ENSMGAG00000003274	SBNO1	100	91.320	ENSLAFG00000002135	SBNO1	100	91.242	Loxodonta_africana
ENSMGAG00000003274	SBNO1	100	92.468	ENSMFAG00000031429	SBNO1	100	92.175	Macaca_fascicularis
ENSMGAG00000003274	SBNO1	100	92.534	ENSMMUG00000011496	SBNO1	100	92.241	Macaca_mulatta
ENSMGAG00000003274	SBNO1	100	90.818	ENSMLEG00000033260	SBNO1	99	95.660	Mandrillus_leucophaeus
ENSMGAG00000003274	SBNO1	99	76.855	ENSMAMG00000005473	sbno1	98	76.923	Mastacembelus_armatus
ENSMGAG00000003274	SBNO1	56	87.931	ENSMAUG00000004834	-	100	88.522	Mesocricetus_auratus
ENSMGAG00000003274	SBNO1	100	91.176	ENSMICG00000006573	-	99	92.405	Microcebus_murinus
ENSMGAG00000003274	SBNO1	94	96.193	ENSMOCG00000009390	Sbno1	99	94.937	Microtus_ochrogaster
ENSMGAG00000003274	SBNO1	99	72.438	ENSMMOG00000008691	sbno1	97	72.262	Mola_mola
ENSMGAG00000003274	SBNO1	99	93.386	ENSMODG00000012470	SBNO1	98	93.386	Monodelphis_domestica
ENSMGAG00000003274	SBNO1	99	75.935	ENSMALG00000001056	sbno1	98	75.608	Monopterus_albus
ENSMGAG00000003274	SBNO1	99	91.951	MGP_CAROLIEiJ_G0027749	Sbno1	95	97.368	Mus_caroli
ENSMGAG00000003274	SBNO1	99	91.876	ENSMUSG00000038095	Sbno1	94	97.368	Mus_musculus
ENSMGAG00000003274	SBNO1	99	92.264	MGP_PahariEiJ_G0024329	Sbno1	95	97.368	Mus_pahari
ENSMGAG00000003274	SBNO1	99	91.804	MGP_SPRETEiJ_G0028747	Sbno1	95	97.368	Mus_spretus
ENSMGAG00000003274	SBNO1	100	92.324	ENSMPUG00000001658	SBNO1	100	92.247	Mustela_putorius_furo
ENSMGAG00000003274	SBNO1	100	91.966	ENSMLUG00000017159	SBNO1	100	91.888	Myotis_lucifugus
ENSMGAG00000003274	SBNO1	100	92.181	ENSNGAG00000012620	Sbno1	98	95.858	Nannospalax_galili
ENSMGAG00000003274	SBNO1	99	75.089	ENSNBRG00000019189	sbno1	98	74.927	Neolamprologus_brichardi
ENSMGAG00000003274	SBNO1	99	89.764	ENSNLEG00000001502	SBNO1	99	89.688	Nomascus_leucogenys
ENSMGAG00000003274	SBNO1	75	78.088	ENSMEUG00000008768	-	93	85.350	Notamacropus_eugenii
ENSMGAG00000003274	SBNO1	100	89.534	ENSOPRG00000011054	SBNO1	100	89.455	Ochotona_princeps
ENSMGAG00000003274	SBNO1	100	92.103	ENSODEG00000009997	SBNO1	99	95.118	Octodon_degus
ENSMGAG00000003274	SBNO1	99	76.372	ENSONIG00000015348	sbno1	98	76.306	Oreochromis_niloticus
ENSMGAG00000003274	SBNO1	99	92.283	ENSOCUG00000002441	SBNO1	93	92.199	Oryctolagus_cuniculus
ENSMGAG00000003274	SBNO1	99	75.796	ENSORLG00000001593	sbno1	99	75.346	Oryzias_latipes
ENSMGAG00000003274	SBNO1	99	75.847	ENSORLG00020015216	sbno1	98	75.612	Oryzias_latipes_hni
ENSMGAG00000003274	SBNO1	99	75.989	ENSORLG00015002726	sbno1	98	75.683	Oryzias_latipes_hsok
ENSMGAG00000003274	SBNO1	99	75.918	ENSOMEG00000019313	sbno1	98	75.520	Oryzias_melastigma
ENSMGAG00000003274	SBNO1	56	85.201	ENSOGAG00000010781	-	100	85.817	Otolemur_garnettii
ENSMGAG00000003274	SBNO1	99	92.295	ENSOARG00000004404	SBNO1	98	92.246	Ovis_aries
ENSMGAG00000003274	SBNO1	100	92.181	ENSPPAG00000024635	SBNO1	99	95.841	Pan_paniscus
ENSMGAG00000003274	SBNO1	99	92.370	ENSPPRG00000022092	SBNO1	99	92.170	Panthera_pardus
ENSMGAG00000003274	SBNO1	100	92.026	ENSPTIG00000017803	SBNO1	100	92.020	Panthera_tigris_altaica
ENSMGAG00000003274	SBNO1	100	92.109	ENSPTRG00000005597	SBNO1	99	95.660	Pan_troglodytes
ENSMGAG00000003274	SBNO1	100	92.247	ENSPANG00000011640	SBNO1	99	95.660	Papio_anubis
ENSMGAG00000003274	SBNO1	99	81.747	ENSPKIG00000001441	sbno1	98	81.692	Paramormyrops_kingsleyae
ENSMGAG00000003274	SBNO1	99	92.220	ENSPSIG00000009256	-	100	90.817	Pelodiscus_sinensis
ENSMGAG00000003274	SBNO1	100	95.344	ENSPSIG00000009572	-	100	95.344	Pelodiscus_sinensis
ENSMGAG00000003274	SBNO1	100	91.601	ENSPEMG00000016087	Sbno1	99	94.213	Peromyscus_maniculatus_bairdii
ENSMGAG00000003274	SBNO1	99	93.391	ENSPCIG00000010985	SBNO1	99	93.463	Phascolarctos_cinereus
ENSMGAG00000003274	SBNO1	99	76.803	ENSPFOG00000005069	sbno1	98	77.139	Poecilia_formosa
ENSMGAG00000003274	SBNO1	99	76.662	ENSPLAG00000015015	sbno1	98	77.067	Poecilia_latipinna
ENSMGAG00000003274	SBNO1	99	76.820	ENSPMEG00000021212	sbno1	98	77.155	Poecilia_mexicana
ENSMGAG00000003274	SBNO1	99	76.325	ENSPREG00000017746	sbno1	98	76.652	Poecilia_reticulata
ENSMGAG00000003274	SBNO1	100	92.032	ENSPPYG00000005084	SBNO1	100	91.954	Pongo_abelii
ENSMGAG00000003274	SBNO1	84	91.441	ENSPCAG00000008634	SBNO1	88	87.603	Procavia_capensis
ENSMGAG00000003274	SBNO1	100	92.396	ENSPCOG00000024277	SBNO1	99	95.455	Propithecus_coquereli
ENSMGAG00000003274	SBNO1	85	97.076	ENSPVAG00000015304	SBNO1	87	95.040	Pteropus_vampyrus
ENSMGAG00000003274	SBNO1	99	76.494	ENSPNYG00000004291	sbno1	98	76.344	Pundamilia_nyererei
ENSMGAG00000003274	SBNO1	99	79.473	ENSPNAG00000015622	sbno1	98	79.636	Pygocentrus_nattereri
ENSMGAG00000003274	SBNO1	94	97.208	ENSRNOG00000001064	Sbno1	99	95.652	Rattus_norvegicus
ENSMGAG00000003274	SBNO1	100	92.253	ENSRROG00000034230	SBNO1	99	95.660	Rhinopithecus_roxellana
ENSMGAG00000003274	SBNO1	97	87.509	ENSSBOG00000015422	SBNO1	100	87.351	Saimiri_boliviensis_boliviensis
ENSMGAG00000003274	SBNO1	99	80.843	ENSSFOG00015019025	sbno1	98	81.109	Scleropages_formosus
ENSMGAG00000003274	SBNO1	99	76.379	ENSSMAG00000013640	sbno1	98	76.585	Scophthalmus_maximus
ENSMGAG00000003274	SBNO1	99	76.342	ENSSDUG00000023480	sbno1	98	76.163	Seriola_dumerili
ENSMGAG00000003274	SBNO1	99	76.271	ENSSLDG00000007928	sbno1	98	76.092	Seriola_lalandi_dorsalis
ENSMGAG00000003274	SBNO1	89	91.922	ENSSARG00000002594	SBNO1	89	91.667	Sorex_araneus
ENSMGAG00000003274	SBNO1	100	92.667	ENSSPUG00000012640	SBNO1	100	92.667	Sphenodon_punctatus
ENSMGAG00000003274	SBNO1	99	75.845	ENSSPAG00000016244	sbno1	98	75.786	Stegastes_partitus
ENSMGAG00000003274	SBNO1	100	92.606	ENSSSCG00000009776	SBNO1	100	92.529	Sus_scrofa
ENSMGAG00000003274	SBNO1	100	98.634	ENSTGUG00000005380	SBNO1	100	98.634	Taeniopygia_guttata
ENSMGAG00000003274	SBNO1	99	76.187	ENSTRUG00000018490	sbno1	98	75.954	Takifugu_rubripes
ENSMGAG00000003274	SBNO1	63	71.004	ENSTNIG00000013506	sbno1	99	71.056	Tetraodon_nigroviridis
ENSMGAG00000003274	SBNO1	100	92.109	ENSUAMG00000019671	SBNO1	100	92.032	Ursus_americanus
ENSMGAG00000003274	SBNO1	100	92.109	ENSUMAG00000004002	SBNO1	100	92.032	Ursus_maritimus
ENSMGAG00000003274	SBNO1	99	87.002	ENSVPAG00000007024	SBNO1	92	86.953	Vicugna_pacos
ENSMGAG00000003274	SBNO1	100	92.109	ENSVVUG00000027807	SBNO1	100	92.032	Vulpes_vulpes
ENSMGAG00000003274	SBNO1	99	83.131	ENSXETG00000031930	SBNO1	99	82.690	Xenopus_tropicalis
ENSMGAG00000003274	SBNO1	99	75.401	ENSXCOG00000011607	sbno1	96	75.321	Xiphophorus_couchianus
ENSMGAG00000003274	SBNO1	99	76.820	ENSXMAG00000002140	sbno1	98	76.962	Xiphophorus_maculatus