EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000003452 (Gene tree)
Gene ID: 100543603
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 11201 bases
Position: chr2:3961868-3973068
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000003188	HAT	PF02184.16	1.4e-35	1	2
ENSMGAP00000003188	HAT	PF02184.16	1.4e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000003885	CRNKL1-201	2190	-	ENSMGAP00000003188	729 (aa)	-	G1MWN6

Gene Model

Click here to download ENSMGAG00000003452's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003452	CRNKL1	97	90.909	ENSG00000101343	CRNKL1	99	92.711	Homo_sapiens
ENSMGAG00000003452	CRNKL1	93	86.784	ENSAPOG00000009705	crnkl1	97	86.303	Acanthochromis_polyacanthus
ENSMGAG00000003452	CRNKL1	93	93.245	ENSAMEG00000000270	CRNKL1	83	93.294	Ailuropoda_melanoleuca
ENSMGAG00000003452	CRNKL1	92	86.677	ENSACIG00000015267	crnkl1	89	86.677	Amphilophus_citrinellus
ENSMGAG00000003452	CRNKL1	93	86.784	ENSAOCG00000021964	crnkl1	90	86.657	Amphiprion_ocellaris
ENSMGAG00000003452	CRNKL1	93	86.784	ENSAPEG00000015041	crnkl1	90	86.657	Amphiprion_percula
ENSMGAG00000003452	CRNKL1	93	85.903	ENSATEG00000001068	crnkl1	89	85.903	Anabas_testudineus
ENSMGAG00000003452	CRNKL1	94	95.912	ENSAPLG00000013105	CRNKL1	99	95.912	Anas_platyrhynchos
ENSMGAG00000003452	CRNKL1	94	92.847	ENSACAG00000005284	CRNKL1	99	92.847	Anolis_carolinensis
ENSMGAG00000003452	CRNKL1	87	93.344	ENSANAG00000024889	CRNKL1	99	93.344	Aotus_nancymaae
ENSMGAG00000003452	CRNKL1	94	86.804	ENSACLG00000010813	crnkl1	90	87.040	Astatotilapia_calliptera
ENSMGAG00000003452	CRNKL1	91	87.688	ENSAMXG00000018334	crnkl1	90	87.761	Astyanax_mexicanus
ENSMGAG00000003452	CRNKL1	94	92.274	ENSBTAG00000008472	CRNKL1	99	92.274	Bos_taurus
ENSMGAG00000003452	CRNKL1	88	62.519	WBGene00019762	M03F8.3	93	61.151	Caenorhabditis_elegans
ENSMGAG00000003452	CRNKL1	94	92.566	ENSCJAG00000005393	CRNKL1	99	92.566	Callithrix_jacchus
ENSMGAG00000003452	CRNKL1	93	92.952	ENSCAFG00000005333	CRNKL1	94	93.003	Canis_familiaris
ENSMGAG00000003452	CRNKL1	94	93.003	ENSCAFG00020027488	CRNKL1	99	93.003	Canis_lupus_dingo
ENSMGAG00000003452	CRNKL1	94	91.399	ENSCHIG00000013171	CRNKL1	99	91.399	Capra_hircus
ENSMGAG00000003452	CRNKL1	94	92.857	ENSTSYG00000004197	CRNKL1	99	92.857	Carlito_syrichta
ENSMGAG00000003452	CRNKL1	90	91.452	ENSCAPG00000010501	CRNKL1	99	91.452	Cavia_aperea
ENSMGAG00000003452	CRNKL1	94	91.983	ENSCPOG00000004418	CRNKL1	99	91.983	Cavia_porcellus
ENSMGAG00000003452	CRNKL1	94	92.566	ENSCCAG00000027037	CRNKL1	99	92.566	Cebus_capucinus
ENSMGAG00000003452	CRNKL1	94	92.566	ENSCATG00000034247	CRNKL1	99	92.566	Cercocebus_atys
ENSMGAG00000003452	CRNKL1	94	92.420	ENSCLAG00000013859	CRNKL1	99	92.420	Chinchilla_lanigera
ENSMGAG00000003452	CRNKL1	94	92.566	ENSCSAG00000011434	CRNKL1	99	92.566	Chlorocebus_sabaeus
ENSMGAG00000003452	CRNKL1	93	92.511	ENSCHOG00000006371	CRNKL1	84	92.566	Choloepus_hoffmanni
ENSMGAG00000003452	CRNKL1	94	94.032	ENSCPBG00000023501	CRNKL1	100	94.032	Chrysemys_picta_bellii
ENSMGAG00000003452	CRNKL1	91	68.271	ENSCING00000002709	-	99	67.055	Ciona_intestinalis
ENSMGAG00000003452	CRNKL1	94	92.711	ENSCANG00000038789	CRNKL1	99	92.711	Colobus_angolensis_palliatus
ENSMGAG00000003452	CRNKL1	94	92.566	ENSCGRG00001001115	-	99	92.566	Cricetulus_griseus_chok1gshd
ENSMGAG00000003452	CRNKL1	94	92.566	ENSCGRG00001000687	-	99	92.566	Cricetulus_griseus_chok1gshd
ENSMGAG00000003452	CRNKL1	94	92.566	ENSCGRG00000007854	Crnkl1	99	92.566	Cricetulus_griseus_crigri
ENSMGAG00000003452	CRNKL1	93	86.263	ENSCSEG00000005594	crnkl1	86	86.263	Cynoglossus_semilaevis
ENSMGAG00000003452	CRNKL1	92	87.275	ENSCVAG00000015172	crnkl1	92	85.298	Cyprinodon_variegatus
ENSMGAG00000003452	CRNKL1	91	86.596	ENSDARG00000007901	crnkl1	90	85.401	Danio_rerio
ENSMGAG00000003452	CRNKL1	94	93.265	ENSDNOG00000016226	CRNKL1	95	93.265	Dasypus_novemcinctus
ENSMGAG00000003452	CRNKL1	92	84.006	ENSDORG00000030174	-	99	84.006	Dipodomys_ordii
ENSMGAG00000003452	CRNKL1	94	91.462	ENSDORG00000000394	-	99	91.462	Dipodomys_ordii
ENSMGAG00000003452	CRNKL1	91	84.558	ENSDORG00000023724	-	98	84.558	Dipodomys_ordii
ENSMGAG00000003452	CRNKL1	91	67.910	FBgn0000377	crn	95	67.910	Drosophila_melanogaster
ENSMGAG00000003452	CRNKL1	94	81.341	ENSETEG00000003711	CRNKL1	84	81.341	Echinops_telfairi
ENSMGAG00000003452	CRNKL1	94	58.964	ENSEBUG00000013461	crnkl1	96	58.964	Eptatretus_burgeri
ENSMGAG00000003452	CRNKL1	94	93.294	ENSEASG00005002072	CRNKL1	99	93.294	Equus_asinus_asinus
ENSMGAG00000003452	CRNKL1	94	93.294	ENSECAG00000022215	CRNKL1	99	93.294	Equus_caballus
ENSMGAG00000003452	CRNKL1	93	90.602	ENSEEUG00000000413	CRNKL1	92	90.671	Erinaceus_europaeus
ENSMGAG00000003452	CRNKL1	92	85.842	ENSELUG00000015424	crnkl1	97	84.279	Esox_lucius
ENSMGAG00000003452	CRNKL1	94	93.294	ENSFCAG00000000714	CRNKL1	99	93.294	Felis_catus
ENSMGAG00000003452	CRNKL1	92	95.982	ENSFALG00000004611	CRNKL1	100	95.982	Ficedula_albicollis
ENSMGAG00000003452	CRNKL1	94	92.679	ENSFDAG00000000604	CRNKL1	99	92.566	Fukomys_damarensis
ENSMGAG00000003452	CRNKL1	93	86.519	ENSFHEG00000013163	crnkl1	88	86.519	Fundulus_heteroclitus
ENSMGAG00000003452	CRNKL1	92	84.753	ENSGMOG00000007609	crnkl1	94	83.115	Gadus_morhua
ENSMGAG00000003452	CRNKL1	94	99.127	ENSGALG00000008429	CRNKL1	100	99.127	Gallus_gallus
ENSMGAG00000003452	CRNKL1	93	85.926	ENSGAFG00000014249	crnkl1	89	85.191	Gambusia_affinis
ENSMGAG00000003452	CRNKL1	92	85.329	ENSGACG00000011852	crnkl1	89	85.329	Gasterosteus_aculeatus
ENSMGAG00000003452	CRNKL1	90	92.542	ENSGAGG00000021233	CRNKL1	100	92.920	Gopherus_agassizii
ENSMGAG00000003452	CRNKL1	100	88.203	ENSGGOG00000014176	CRNKL1	99	92.711	Gorilla_gorilla
ENSMGAG00000003452	CRNKL1	93	86.892	ENSHBUG00000005246	crnkl1	90	86.892	Haplochromis_burtoni
ENSMGAG00000003452	CRNKL1	94	92.274	ENSHGLG00000010856	CRNKL1	99	92.274	Heterocephalus_glaber_female
ENSMGAG00000003452	CRNKL1	94	92.274	ENSHGLG00100011521	CRNKL1	99	92.274	Heterocephalus_glaber_male
ENSMGAG00000003452	CRNKL1	92	84.799	ENSHCOG00000006420	crnkl1	98	83.626	Hippocampus_comes
ENSMGAG00000003452	CRNKL1	89	87.057	ENSIPUG00000006751	crnkl1	93	85.373	Ictalurus_punctatus
ENSMGAG00000003452	CRNKL1	91	75.000	ENSIPUG00000006836	-	98	74.776	Ictalurus_punctatus
ENSMGAG00000003452	CRNKL1	87	68.446	ENSIPUG00000000315	-	99	69.654	Ictalurus_punctatus
ENSMGAG00000003452	CRNKL1	94	92.711	ENSSTOG00000014747	CRNKL1	99	92.711	Ictidomys_tridecemlineatus
ENSMGAG00000003452	CRNKL1	94	90.870	ENSJJAG00000016926	Crnkl1	99	90.870	Jaculus_jaculus
ENSMGAG00000003452	CRNKL1	92	87.725	ENSKMAG00000003620	crnkl1	85	87.725	Kryptolebias_marmoratus
ENSMGAG00000003452	CRNKL1	92	69.333	ENSLBEG00000003543	crnkl1	92	70.262	Labrus_bergylta
ENSMGAG00000003452	CRNKL1	94	88.613	ENSLACG00000001129	CRNKL1	100	88.613	Latimeria_chalumnae
ENSMGAG00000003452	CRNKL1	91	89.640	ENSLOCG00000016889	crnkl1	95	88.192	Lepisosteus_oculatus
ENSMGAG00000003452	CRNKL1	94	91.994	ENSLAFG00000004512	CRNKL1	99	92.722	Loxodonta_africana
ENSMGAG00000003452	CRNKL1	94	92.566	ENSMFAG00000039893	CRNKL1	99	92.566	Macaca_fascicularis
ENSMGAG00000003452	CRNKL1	94	92.566	ENSMMUG00000007709	CRNKL1	99	92.566	Macaca_mulatta
ENSMGAG00000003452	CRNKL1	94	92.566	ENSMNEG00000037490	CRNKL1	99	92.566	Macaca_nemestrina
ENSMGAG00000003452	CRNKL1	94	92.566	ENSMLEG00000034885	CRNKL1	99	92.566	Mandrillus_leucophaeus
ENSMGAG00000003452	CRNKL1	94	85.924	ENSMAMG00000008757	crnkl1	90	85.924	Mastacembelus_armatus
ENSMGAG00000003452	CRNKL1	93	87.040	ENSMZEG00005022345	crnkl1	90	87.040	Maylandia_zebra
ENSMGAG00000003452	CRNKL1	94	92.420	ENSMAUG00000020764	Crnkl1	99	92.420	Mesocricetus_auratus
ENSMGAG00000003452	CRNKL1	94	93.003	ENSMICG00000006048	CRNKL1	99	93.003	Microcebus_murinus
ENSMGAG00000003452	CRNKL1	94	85.222	ENSMOCG00000000681	-	99	85.222	Microtus_ochrogaster
ENSMGAG00000003452	CRNKL1	91	66.316	ENSMOCG00000004179	-	95	66.419	Microtus_ochrogaster
ENSMGAG00000003452	CRNKL1	87	85.150	ENSMMOG00000017601	crnkl1	97	85.150	Mola_mola
ENSMGAG00000003452	CRNKL1	94	85.277	ENSMODG00000010857	-	99	85.277	Monodelphis_domestica
ENSMGAG00000003452	CRNKL1	94	90.346	ENSMODG00000005961	-	99	90.346	Monodelphis_domestica
ENSMGAG00000003452	CRNKL1	93	63.188	ENSMALG00000011211	crnkl1	88	63.422	Monopterus_albus
ENSMGAG00000003452	CRNKL1	94	92.420	MGP_CAROLIEiJ_G0024394	Crnkl1	99	92.420	Mus_caroli
ENSMGAG00000003452	CRNKL1	94	92.566	ENSMUSG00000001767	Crnkl1	99	92.566	Mus_musculus
ENSMGAG00000003452	CRNKL1	94	91.108	MGP_PahariEiJ_G0025838	Crnkl1	99	91.108	Mus_pahari
ENSMGAG00000003452	CRNKL1	94	92.566	MGP_SPRETEiJ_G0025312	Crnkl1	99	92.566	Mus_spretus
ENSMGAG00000003452	CRNKL1	94	93.440	ENSMPUG00000001226	CRNKL1	99	93.440	Mustela_putorius_furo
ENSMGAG00000003452	CRNKL1	93	93.392	ENSMLUG00000016513	CRNKL1	89	93.440	Myotis_lucifugus
ENSMGAG00000003452	CRNKL1	94	91.117	ENSNGAG00000023097	Crnkl1	99	91.117	Nannospalax_galili
ENSMGAG00000003452	CRNKL1	93	87.187	ENSNBRG00000007867	crnkl1	89	87.187	Neolamprologus_brichardi
ENSMGAG00000003452	CRNKL1	94	89.213	ENSNLEG00000009862	CRNKL1	99	89.213	Nomascus_leucogenys
ENSMGAG00000003452	CRNKL1	94	84.279	ENSMEUG00000002361	-	99	84.279	Notamacropus_eugenii
ENSMGAG00000003452	CRNKL1	92	92.548	ENSMEUG00000012167	-	100	92.548	Notamacropus_eugenii
ENSMGAG00000003452	CRNKL1	81	61.996	ENSOPRG00000009242	-	62	61.996	Ochotona_princeps
ENSMGAG00000003452	CRNKL1	94	92.420	ENSODEG00000012175	CRNKL1	99	92.420	Octodon_degus
ENSMGAG00000003452	CRNKL1	93	87.040	ENSONIG00000018728	crnkl1	89	87.040	Oreochromis_niloticus
ENSMGAG00000003452	CRNKL1	93	91.765	ENSOCUG00000015484	CRNKL1	83	92.151	Oryctolagus_cuniculus
ENSMGAG00000003452	CRNKL1	92	85.030	ENSORLG00000017240	crnkl1	96	79.740	Oryzias_latipes
ENSMGAG00000003452	CRNKL1	92	85.180	ENSORLG00020001742	crnkl1	89	85.180	Oryzias_latipes_hni
ENSMGAG00000003452	CRNKL1	92	85.180	ENSORLG00015019564	crnkl1	89	85.180	Oryzias_latipes_hsok
ENSMGAG00000003452	CRNKL1	94	83.697	ENSOMEG00000019895	crnkl1	92	83.697	Oryzias_melastigma
ENSMGAG00000003452	CRNKL1	94	92.420	ENSOGAG00000011544	CRNKL1	99	92.420	Otolemur_garnettii
ENSMGAG00000003452	CRNKL1	98	88.690	ENSOARG00000002150	CRNKL1	94	88.966	Ovis_aries
ENSMGAG00000003452	CRNKL1	97	90.057	ENSPPAG00000027847	CRNKL1	88	87.380	Pan_paniscus
ENSMGAG00000003452	CRNKL1	94	93.294	ENSPPRG00000001955	CRNKL1	99	93.294	Panthera_pardus
ENSMGAG00000003452	CRNKL1	94	93.294	ENSPTIG00000007393	CRNKL1	99	93.294	Panthera_tigris_altaica
ENSMGAG00000003452	CRNKL1	94	92.857	ENSPTRG00000030609	CRNKL1	99	92.857	Pan_troglodytes
ENSMGAG00000003452	CRNKL1	94	92.566	ENSPANG00000017420	CRNKL1	99	92.566	Papio_anubis
ENSMGAG00000003452	CRNKL1	91	82.282	ENSPKIG00000017093	crnkl1	89	81.552	Paramormyrops_kingsleyae
ENSMGAG00000003452	CRNKL1	94	93.129	ENSPSIG00000012705	CRNKL1	99	93.129	Pelodiscus_sinensis
ENSMGAG00000003452	CRNKL1	94	78.592	ENSPMGG00000006263	crnkl1	96	78.592	Periophthalmus_magnuspinnatus
ENSMGAG00000003452	CRNKL1	94	92.857	ENSPEMG00000000073	-	99	92.857	Peromyscus_maniculatus_bairdii
ENSMGAG00000003452	CRNKL1	94	81.567	ENSPMAG00000002250	crnkl1	99	81.567	Petromyzon_marinus
ENSMGAG00000003452	CRNKL1	94	92.857	ENSPCIG00000025825	CRNKL1	96	92.857	Phascolarctos_cinereus
ENSMGAG00000003452	CRNKL1	92	86.527	ENSPFOG00000005102	crnkl1	91	85.778	Poecilia_formosa
ENSMGAG00000003452	CRNKL1	95	84.150	ENSPLAG00000007288	crnkl1	90	83.452	Poecilia_latipinna
ENSMGAG00000003452	CRNKL1	92	86.677	ENSPMEG00000008865	crnkl1	92	85.926	Poecilia_mexicana
ENSMGAG00000003452	CRNKL1	92	86.228	ENSPREG00000012615	crnkl1	92	84.548	Poecilia_reticulata
ENSMGAG00000003452	CRNKL1	97	90.909	ENSPPYG00000010747	CRNKL1	86	88.203	Pongo_abelii
ENSMGAG00000003452	CRNKL1	96	85.897	ENSPCAG00000003296	CRNKL1	87	86.040	Procavia_capensis
ENSMGAG00000003452	CRNKL1	93	92.364	ENSPCOG00000017608	CRNKL1	83	92.163	Propithecus_coquereli
ENSMGAG00000003452	CRNKL1	98	89.121	ENSPVAG00000006207	CRNKL1	87	89.819	Pteropus_vampyrus
ENSMGAG00000003452	CRNKL1	93	86.892	ENSPNYG00000001977	crnkl1	90	86.892	Pundamilia_nyererei
ENSMGAG00000003452	CRNKL1	92	88.244	ENSPNAG00000001507	crnkl1	98	84.302	Pygocentrus_nattereri
ENSMGAG00000003452	CRNKL1	94	92.274	ENSRNOG00000040045	Crnkl1	99	92.274	Rattus_norvegicus
ENSMGAG00000003452	CRNKL1	94	92.566	ENSRNOG00000010587	Crnkl1	99	92.566	Rattus_norvegicus
ENSMGAG00000003452	CRNKL1	94	92.420	ENSRBIG00000031770	CRNKL1	99	92.420	Rhinopithecus_bieti
ENSMGAG00000003452	CRNKL1	94	92.274	ENSRROG00000040450	CRNKL1	99	92.274	Rhinopithecus_roxellana
ENSMGAG00000003452	CRNKL1	89	37.971	YLR117C	CLF1	99	38.061	Saccharomyces_cerevisiae
ENSMGAG00000003452	CRNKL1	94	92.566	ENSSBOG00000029672	CRNKL1	99	92.566	Saimiri_boliviensis_boliviensis
ENSMGAG00000003452	CRNKL1	90	74.091	ENSSHAG00000011199	CRNKL1	99	74.091	Sarcophilus_harrisii
ENSMGAG00000003452	CRNKL1	91	87.048	ENSSFOG00015000946	crnkl1	89	85.423	Scleropages_formosus
ENSMGAG00000003452	CRNKL1	94	84.818	ENSSMAG00000007933	crnkl1	89	84.818	Scophthalmus_maximus
ENSMGAG00000003452	CRNKL1	93	79.736	ENSSDUG00000012625	crnkl1	87	79.736	Seriola_dumerili
ENSMGAG00000003452	CRNKL1	93	86.471	ENSSLDG00000021413	crnkl1	88	86.471	Seriola_lalandi_dorsalis
ENSMGAG00000003452	CRNKL1	94	92.128	ENSSARG00000006443	CRNKL1	82	92.128	Sorex_araneus
ENSMGAG00000003452	CRNKL1	94	93.139	ENSSPUG00000005254	CRNKL1	99	93.139	Sphenodon_punctatus
ENSMGAG00000003452	CRNKL1	92	87.575	ENSSPAG00000016150	crnkl1	86	87.575	Stegastes_partitus
ENSMGAG00000003452	CRNKL1	94	93.003	ENSSSCG00000038587	CRNKL1	99	93.003	Sus_scrofa
ENSMGAG00000003452	CRNKL1	94	96.076	ENSTGUG00000007645	CRNKL1	100	95.129	Taeniopygia_guttata
ENSMGAG00000003452	CRNKL1	92	80.981	ENSTRUG00000015417	crnkl1	90	80.352	Takifugu_rubripes
ENSMGAG00000003452	CRNKL1	92	85.202	ENSTNIG00000010710	crnkl1	99	83.721	Tetraodon_nigroviridis
ENSMGAG00000003452	CRNKL1	86	91.214	ENSTBEG00000001304	CRNKL1	82	91.009	Tupaia_belangeri
ENSMGAG00000003452	CRNKL1	90	86.830	ENSTTRG00000000484	CRNKL1	81	89.223	Tursiops_truncatus
ENSMGAG00000003452	CRNKL1	94	93.294	ENSUAMG00000018586	CRNKL1	99	93.294	Ursus_americanus
ENSMGAG00000003452	CRNKL1	94	93.294	ENSUMAG00000024957	CRNKL1	99	93.294	Ursus_maritimus
ENSMGAG00000003452	CRNKL1	93	92.952	ENSVVUG00000012559	CRNKL1	82	93.003	Vulpes_vulpes
ENSMGAG00000003452	CRNKL1	94	89.971	ENSXETG00000009698	crnkl1	99	89.971	Xenopus_tropicalis
ENSMGAG00000003452	CRNKL1	92	85.928	ENSXCOG00000000824	crnkl1	90	85.185	Xiphophorus_couchianus
ENSMGAG00000003452	CRNKL1	92	86.677	ENSXMAG00000006896	crnkl1	90	85.926	Xiphophorus_maculatus