EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000003517 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 20871 bases
Position: chr4:10987013-11007883
Accession: 100544130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000018293	ResIII	PF04851.15	5e-12	1	1
ENSMGAP00000003271	ResIII	PF04851.15	1.1e-11	1	1
ENSMGAP00000018293	DEAD	PF00270.29	4.4e-07	1	1
ENSMGAP00000003271	DEAD	PF00270.29	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000003970	SMARCA5-201	3255	XM_010709523	ENSMGAP00000003271	1007 (aa)	XP_010707825	G1MWV9
ENSMGAT00000018303	SMARCA5-202	3217	-	ENSMGAP00000018293	426 (aa)	-	G3URI6

Gene Model

Click here to download ENSMGAG00000003517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000003517	SMARCA5	62	44.484	ENSMGAG00000006818	HELLS	65	46.800
ENSMGAG00000003517	SMARCA5	52	41.393	ENSMGAG00000008369	-	50	37.592
ENSMGAG00000003517	SMARCA5	98	86.600	ENSMGAG00000007042	SMARCA1	99	86.600
ENSMGAG00000003517	SMARCA5	69	38.487	ENSMGAG00000005577	SMARCAD1	53	38.178
ENSMGAG00000003517	SMARCA5	53	30.912	ENSMGAG00000012024	-	64	30.964
ENSMGAG00000003517	SMARCA5	69	43.243	ENSMGAG00000014304	CHD1L	64	41.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003517	SMARCA5	99	97.100	ENSG00000153147	SMARCA5	95	97.100	Homo_sapiens
ENSMGAG00000003517	SMARCA5	99	97.300	ENSAMEG00000009585	SMARCA5	95	97.300	Ailuropoda_melanoleuca
ENSMGAG00000003517	SMARCA5	96	98.665	ENSAPLG00000009206	SMARCA5	100	98.665	Anas_platyrhynchos
ENSMGAG00000003517	SMARCA5	99	97.384	ENSACAG00000003038	SMARCA5	96	97.384	Anolis_carolinensis
ENSMGAG00000003517	SMARCA5	99	97.384	ENSANAG00000019345	SMARCA5	99	97.384	Aotus_nancymaae
ENSMGAG00000003517	SMARCA5	99	97.686	ENSBTAG00000003399	SMARCA5	96	96.624	Bos_taurus
ENSMGAG00000003517	SMARCA5	99	97.100	ENSCJAG00000002735	SMARCA5	95	97.100	Callithrix_jacchus
ENSMGAG00000003517	SMARCA5	99	97.300	ENSCAFG00000007525	SMARCA5	95	97.300	Canis_familiaris
ENSMGAG00000003517	SMARCA5	97	97.347	ENSCAFG00020025641	SMARCA5	94	97.347	Canis_lupus_dingo
ENSMGAG00000003517	SMARCA5	100	94.935	ENSCHIG00000016375	-	97	94.935	Capra_hircus
ENSMGAG00000003517	SMARCA5	100	96.624	ENSCHIG00000013730	-	96	96.624	Capra_hircus
ENSMGAG00000003517	SMARCA5	99	97.787	ENSTSYG00000009954	SMARCA5	99	97.787	Carlito_syrichta
ENSMGAG00000003517	SMARCA5	96	97.420	ENSCAPG00000013747	SMARCA5	95	97.420	Cavia_aperea
ENSMGAG00000003517	SMARCA5	100	96.425	ENSCPOG00000002259	SMARCA5	96	96.425	Cavia_porcellus
ENSMGAG00000003517	SMARCA5	99	97.485	ENSCCAG00000027215	SMARCA5	99	97.485	Cebus_capucinus
ENSMGAG00000003517	SMARCA5	99	97.100	ENSCATG00000044917	SMARCA5	95	97.100	Cercocebus_atys
ENSMGAG00000003517	SMARCA5	99	97.384	ENSCLAG00000006153	SMARCA5	100	97.384	Chinchilla_lanigera
ENSMGAG00000003517	SMARCA5	96	97.835	ENSCSAG00000003448	SMARCA5	100	97.835	Chlorocebus_sabaeus
ENSMGAG00000003517	SMARCA5	87	96.815	ENSCHOG00000011724	SMARCA5	83	96.815	Choloepus_hoffmanni
ENSMGAG00000003517	SMARCA5	99	97.998	ENSCPBG00000027535	SMARCA5	96	97.998	Chrysemys_picta_bellii
ENSMGAG00000003517	SMARCA5	99	97.000	ENSCANG00000041629	SMARCA5	95	97.000	Colobus_angolensis_palliatus
ENSMGAG00000003517	SMARCA5	99	97.200	ENSCGRG00001012719	Smarca5	95	97.200	Cricetulus_griseus_chok1gshd
ENSMGAG00000003517	SMARCA5	99	97.586	ENSCGRG00000001417	Smarca5	99	97.586	Cricetulus_griseus_crigri
ENSMGAG00000003517	SMARCA5	100	94.042	ENSDNOG00000009158	SMARCA5	96	94.042	Dasypus_novemcinctus
ENSMGAG00000003517	SMARCA5	97	96.845	ENSDORG00000003466	Smarca5	97	89.568	Dipodomys_ordii
ENSMGAG00000003517	SMARCA5	96	85.552	ENSEBUG00000014773	SMARCA5	96	85.552	Eptatretus_burgeri
ENSMGAG00000003517	SMARCA5	99	97.300	ENSEASG00005001866	SMARCA5	98	98.184	Equus_asinus_asinus
ENSMGAG00000003517	SMARCA5	99	97.300	ENSECAG00000002676	SMARCA5	95	97.300	Equus_caballus
ENSMGAG00000003517	SMARCA5	97	96.602	ENSEEUG00000013176	SMARCA5	100	93.159	Erinaceus_europaeus
ENSMGAG00000003517	SMARCA5	96	90.000	ENSELUG00000014653	SMARCA5	99	90.000	Esox_lucius
ENSMGAG00000003517	SMARCA5	99	97.300	ENSFCAG00000004544	SMARCA5	95	97.300	Felis_catus
ENSMGAG00000003517	SMARCA5	96	98.969	ENSFALG00000004987	SMARCA5	100	98.969	Ficedula_albicollis
ENSMGAG00000003517	SMARCA5	99	97.586	ENSFDAG00000021016	SMARCA5	100	97.586	Fukomys_damarensis
ENSMGAG00000003517	SMARCA5	99	88.300	ENSGMOG00000007519	SMARCA5	97	88.300	Gadus_morhua
ENSMGAG00000003517	SMARCA5	99	99.600	ENSGALG00000009913	SMARCA5	96	99.600	Gallus_gallus
ENSMGAG00000003517	SMARCA5	97	90.993	ENSGACG00000017238	SMARCA5	98	88.473	Gasterosteus_aculeatus
ENSMGAG00000003517	SMARCA5	99	98.098	ENSGAGG00000019882	SMARCA5	96	98.098	Gopherus_agassizii
ENSMGAG00000003517	SMARCA5	99	97.485	ENSGGOG00000012595	SMARCA5	99	97.485	Gorilla_gorilla
ENSMGAG00000003517	SMARCA5	100	96.524	ENSHGLG00000000816	-	96	96.524	Heterocephalus_glaber_female
ENSMGAG00000003517	SMARCA5	97	91.019	ENSHGLG00000000317	-	95	87.400	Heterocephalus_glaber_female
ENSMGAG00000003517	SMARCA5	99	97.581	ENSHGLG00100018421	-	100	97.485	Heterocephalus_glaber_male
ENSMGAG00000003517	SMARCA5	99	97.400	ENSSTOG00000010683	SMARCA5	95	97.400	Ictidomys_tridecemlineatus
ENSMGAG00000003517	SMARCA5	99	96.900	ENSJJAG00000014965	Smarca5	95	96.900	Jaculus_jaculus
ENSMGAG00000003517	SMARCA5	99	94.544	ENSLACG00000007091	SMARCA5	99	94.544	Latimeria_chalumnae
ENSMGAG00000003517	SMARCA5	98	93.096	ENSLOCG00000008966	SMARCA5	96	93.096	Lepisosteus_oculatus
ENSMGAG00000003517	SMARCA5	99	97.300	ENSLAFG00000007795	SMARCA5	95	97.300	Loxodonta_africana
ENSMGAG00000003517	SMARCA5	99	97.100	ENSMFAG00000043649	SMARCA5	95	97.100	Macaca_fascicularis
ENSMGAG00000003517	SMARCA5	99	97.100	ENSMMUG00000000829	SMARCA5	97	97.893	Macaca_mulatta
ENSMGAG00000003517	SMARCA5	99	97.100	ENSMNEG00000031916	SMARCA5	95	97.100	Macaca_nemestrina
ENSMGAG00000003517	SMARCA5	99	97.100	ENSMLEG00000042393	SMARCA5	95	97.100	Mandrillus_leucophaeus
ENSMGAG00000003517	SMARCA5	99	97.586	ENSMAUG00000015902	Smarca5	98	97.586	Mesocricetus_auratus
ENSMGAG00000003517	SMARCA5	99	97.200	ENSMICG00000003971	SMARCA5	99	96.200	Microcebus_murinus
ENSMGAG00000003517	SMARCA5	99	96.900	ENSMOCG00000016986	-	95	96.900	Microtus_ochrogaster
ENSMGAG00000003517	SMARCA5	99	97.798	ENSMODG00000000391	SMARCA5	95	97.798	Monodelphis_domestica
ENSMGAG00000003517	SMARCA5	99	96.800	ENSMUSG00000031715	Smarca5	95	96.800	Mus_musculus
ENSMGAG00000003517	SMARCA5	99	97.000	MGP_PahariEiJ_G0022862	Smarca5	95	97.000	Mus_pahari
ENSMGAG00000003517	SMARCA5	99	97.300	ENSMLUG00000000468	SMARCA5	95	97.300	Myotis_lucifugus
ENSMGAG00000003517	SMARCA5	99	97.000	ENSNGAG00000000441	Smarca5	95	97.000	Nannospalax_galili
ENSMGAG00000003517	SMARCA5	99	97.100	ENSNLEG00000005383	SMARCA5	95	97.100	Nomascus_leucogenys
ENSMGAG00000003517	SMARCA5	91	98.191	ENSMEUG00000001267	SMARCA5	100	90.609	Notamacropus_eugenii
ENSMGAG00000003517	SMARCA5	89	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSMGAG00000003517	SMARCA5	96	98.454	ENSOANG00000013921	SMARCA5	100	98.454	Ornithorhynchus_anatinus
ENSMGAG00000003517	SMARCA5	96	98.041	ENSOCUG00000013042	SMARCA5	100	98.041	Oryctolagus_cuniculus
ENSMGAG00000003517	SMARCA5	99	97.200	ENSOGAG00000009702	SMARCA5	95	97.200	Otolemur_garnettii
ENSMGAG00000003517	SMARCA5	99	96.421	ENSOARG00000010589	SMARCA5	95	96.421	Ovis_aries
ENSMGAG00000003517	SMARCA5	99	97.586	ENSPPAG00000028523	SMARCA5	99	97.586	Pan_paniscus
ENSMGAG00000003517	SMARCA5	97	96.845	ENSPPRG00000004925	SMARCA5	95	92.500	Panthera_pardus
ENSMGAG00000003517	SMARCA5	99	97.300	ENSPTIG00000020959	SMARCA5	96	97.300	Panthera_tigris_altaica
ENSMGAG00000003517	SMARCA5	99	97.485	ENSPTRG00000016472	SMARCA5	99	97.485	Pan_troglodytes
ENSMGAG00000003517	SMARCA5	99	97.100	ENSPANG00000001175	SMARCA5	95	97.100	Papio_anubis
ENSMGAG00000003517	SMARCA5	99	90.030	ENSPKIG00000015885	SMARCA5	100	92.062	Paramormyrops_kingsleyae
ENSMGAG00000003517	SMARCA5	97	91.393	ENSPKIG00000015699	SMARCA5	98	90.307	Paramormyrops_kingsleyae
ENSMGAG00000003517	SMARCA5	99	96.482	ENSPSIG00000004177	SMARCA5	99	96.482	Pelodiscus_sinensis
ENSMGAG00000003517	SMARCA5	96	90.947	ENSPMGG00000012316	SMARCA5	100	90.947	Periophthalmus_magnuspinnatus
ENSMGAG00000003517	SMARCA5	100	96.524	ENSPEMG00000008060	Smarca5	99	96.524	Peromyscus_maniculatus_bairdii
ENSMGAG00000003517	SMARCA5	96	86.520	ENSPMAG00000006011	SMARCA5	82	84.531	Petromyzon_marinus
ENSMGAG00000003517	SMARCA5	94	87.500	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSMGAG00000003517	SMARCA5	99	97.798	ENSPCIG00000003926	SMARCA5	95	97.798	Phascolarctos_cinereus
ENSMGAG00000003517	SMARCA5	99	97.100	ENSPPYG00000015091	SMARCA5	95	97.100	Pongo_abelii
ENSMGAG00000003517	SMARCA5	91	91.214	ENSPCAG00000014230	SMARCA5	83	93.500	Procavia_capensis
ENSMGAG00000003517	SMARCA5	97	96.602	ENSPCOG00000026744	SMARCA5	99	94.266	Propithecus_coquereli
ENSMGAG00000003517	SMARCA5	99	97.200	ENSPVAG00000006482	SMARCA5	95	97.200	Pteropus_vampyrus
ENSMGAG00000003517	SMARCA5	99	90.419	ENSPNAG00000027824	SMARCA5	98	89.898	Pygocentrus_nattereri
ENSMGAG00000003517	SMARCA5	99	97.286	ENSRNOG00000018149	Smarca5	99	97.286	Rattus_norvegicus
ENSMGAG00000003517	SMARCA5	99	97.485	ENSRBIG00000044644	SMARCA5	94	97.485	Rhinopithecus_bieti
ENSMGAG00000003517	SMARCA5	99	97.485	ENSRROG00000029591	SMARCA5	99	97.485	Rhinopithecus_roxellana
ENSMGAG00000003517	SMARCA5	99	97.100	ENSSBOG00000036257	SMARCA5	95	97.100	Saimiri_boliviensis_boliviensis
ENSMGAG00000003517	SMARCA5	99	98.286	ENSSHAG00000008464	SMARCA5	99	98.286	Sarcophilus_harrisii
ENSMGAG00000003517	SMARCA5	99	90.891	ENSSFOG00015013252	SMARCA5	97	90.891	Scleropages_formosus
ENSMGAG00000003517	SMARCA5	99	96.683	ENSSPUG00000007604	SMARCA5	99	96.683	Sphenodon_punctatus
ENSMGAG00000003517	SMARCA5	99	97.300	ENSSSCG00000009047	SMARCA5	95	97.300	Sus_scrofa
ENSMGAG00000003517	SMARCA5	99	97.898	ENSTGUG00000002408	SMARCA5	99	97.898	Taeniopygia_guttata
ENSMGAG00000003517	SMARCA5	97	97.347	ENSUAMG00000023495	SMARCA5	94	97.347	Ursus_americanus
ENSMGAG00000003517	SMARCA5	99	97.300	ENSUMAG00000015324	SMARCA5	97	97.300	Ursus_maritimus
ENSMGAG00000003517	SMARCA5	99	97.200	ENSVPAG00000008982	SMARCA5	95	97.200	Vicugna_pacos
ENSMGAG00000003517	SMARCA5	99	97.300	ENSVVUG00000017473	SMARCA5	95	97.300	Vulpes_vulpes
ENSMGAG00000003517	SMARCA5	95	93.403	ENSXETG00000017566	smarca5	96	93.403	Xenopus_tropicalis