EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000003558 (Gene tree)
Gene ID: -
Gene Symbol: HTATSF1
Alias: TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 10617 bases
Position: chr9:3898053-3908669
Accession: 5276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000003299	RRM_1	PF00076.22	2.8e-15	1	2
ENSMGAP00000003299	RRM_1	PF00076.22	2.8e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000003999	HTATSF1-201	1636	-	ENSMGAP00000003299	429 (aa)	-	G1MWX9

Gene Model

Click here to download ENSMGAG00000003558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003558	HTATSF1	85	70.330	ENSG00000102241	HTATSF1	78	71.978	Homo_sapiens
ENSMGAG00000003558	HTATSF1	97	60.798	ENSAPOG00000009823	htatsf1	93	60.798	Acanthochromis_polyacanthus
ENSMGAG00000003558	HTATSF1	98	62.413	ENSACIG00000020459	htatsf1	94	62.413	Amphilophus_citrinellus
ENSMGAG00000003558	HTATSF1	97	59.259	ENSAOCG00000020994	htatsf1	93	59.954	Amphiprion_ocellaris
ENSMGAG00000003558	HTATSF1	97	61.163	ENSAPEG00000016432	htatsf1	93	60.606	Amphiprion_percula
ENSMGAG00000003558	HTATSF1	87	63.753	ENSATEG00000008903	htatsf1	82	67.308	Anabas_testudineus
ENSMGAG00000003558	HTATSF1	96	94.915	ENSAPLG00000012401	HTATSF1	100	94.915	Anas_platyrhynchos
ENSMGAG00000003558	HTATSF1	89	70.130	ENSACAG00000009346	HTATSF1	98	70.051	Anolis_carolinensis
ENSMGAG00000003558	HTATSF1	97	61.894	ENSACLG00000008096	htatsf1	93	62.037	Astatotilapia_calliptera
ENSMGAG00000003558	HTATSF1	97	62.243	ENSAMXG00000008387	htatsf1	94	62.125	Astyanax_mexicanus
ENSMGAG00000003558	HTATSF1	73	36.170	WBGene00022025	Y65B4A.1	75	36.782	Caenorhabditis_elegans
ENSMGAG00000003558	HTATSF1	99	80.796	ENSCPBG00000026092	HTATSF1	97	80.549	Chrysemys_picta_bellii
ENSMGAG00000003558	HTATSF1	86	45.308	ENSCING00000005914	-	78	47.009	Ciona_intestinalis
ENSMGAG00000003558	HTATSF1	80	44.205	ENSCSAVG00000000371	-	80	43.396	Ciona_savignyi
ENSMGAG00000003558	HTATSF1	97	63.573	ENSCVAG00000014070	htatsf1	92	62.645	Cyprinodon_variegatus
ENSMGAG00000003558	HTATSF1	99	61.060	ENSDARG00000056649	htatsf1	95	61.239	Danio_rerio
ENSMGAG00000003558	HTATSF1	86	44.125	FBgn0037081	barc	62	47.143	Drosophila_melanogaster
ENSMGAG00000003558	HTATSF1	84	54.331	ENSEBUG00000001534	htatsf1	76	55.091	Eptatretus_burgeri
ENSMGAG00000003558	HTATSF1	99	60.000	ENSELUG00000005486	htatsf1	86	61.468	Esox_lucius
ENSMGAG00000003558	HTATSF1	99	91.038	ENSFALG00000003728	HTATSF1	94	91.038	Ficedula_albicollis
ENSMGAG00000003558	HTATSF1	97	61.949	ENSFHEG00000020286	htatsf1	93	62.238	Fundulus_heteroclitus
ENSMGAG00000003558	HTATSF1	77	66.465	ENSGMOG00000016444	htatsf1	93	66.465	Gadus_morhua
ENSMGAG00000003558	HTATSF1	99	98.131	ENSGALG00000006410	HTATSF1	95	98.131	Gallus_gallus
ENSMGAG00000003558	HTATSF1	97	62.850	ENSGAFG00000003041	htatsf1	91	61.916	Gambusia_affinis
ENSMGAG00000003558	HTATSF1	99	61.021	ENSGACG00000020459	htatsf1	95	60.789	Gasterosteus_aculeatus
ENSMGAG00000003558	HTATSF1	97	62.500	ENSHBUG00000004392	htatsf1	93	62.500	Haplochromis_burtoni
ENSMGAG00000003558	HTATSF1	99	57.403	ENSHCOG00000009056	htatsf1	95	59.226	Hippocampus_comes
ENSMGAG00000003558	HTATSF1	85	68.044	ENSIPUG00000017828	htatsf1	95	60.497	Ictalurus_punctatus
ENSMGAG00000003558	HTATSF1	97	62.383	ENSKMAG00000007622	htatsf1	93	62.617	Kryptolebias_marmoratus
ENSMGAG00000003558	HTATSF1	98	61.343	ENSLBEG00000001154	htatsf1	94	62.125	Labrus_bergylta
ENSMGAG00000003558	HTATSF1	98	67.221	ENSLACG00000015989	HTATSF1	92	67.221	Latimeria_chalumnae
ENSMGAG00000003558	HTATSF1	96	44.622	ENSLOCG00000015118	htatsf1	93	43.341	Lepisosteus_oculatus
ENSMGAG00000003558	HTATSF1	82	72.881	ENSLAFG00000014307	HTATSF1	51	71.751	Loxodonta_africana
ENSMGAG00000003558	HTATSF1	98	60.698	ENSMAMG00000021225	htatsf1	94	60.698	Mastacembelus_armatus
ENSMGAG00000003558	HTATSF1	97	61.894	ENSMZEG00005000485	htatsf1	93	62.037	Maylandia_zebra
ENSMGAG00000003558	HTATSF1	97	61.111	ENSMMOG00000011013	htatsf1	93	61.021	Mola_mola
ENSMGAG00000003558	HTATSF1	97	70.991	ENSMODG00000014087	-	90	70.991	Monodelphis_domestica
ENSMGAG00000003558	HTATSF1	52	77.027	ENSMODG00000000199	-	80	76.098	Monodelphis_domestica
ENSMGAG00000003558	HTATSF1	99	61.224	ENSMALG00000019977	htatsf1	95	60.998	Monopterus_albus
ENSMGAG00000003558	HTATSF1	97	61.894	ENSNBRG00000003818	htatsf1	93	61.982	Neolamprologus_brichardi
ENSMGAG00000003558	HTATSF1	85	76.503	ENSMEUG00000004133	-	84	77.437	Notamacropus_eugenii
ENSMGAG00000003558	HTATSF1	97	61.894	ENSONIG00000008638	htatsf1	93	62.037	Oreochromis_niloticus
ENSMGAG00000003558	HTATSF1	96	78.102	ENSOANG00000011674	-	99	78.102	Ornithorhynchus_anatinus
ENSMGAG00000003558	HTATSF1	97	62.937	ENSORLG00000002356	htatsf1	93	64.019	Oryzias_latipes
ENSMGAG00000003558	HTATSF1	97	64.569	ENSORLG00020017818	htatsf1	90	64.569	Oryzias_latipes_hni
ENSMGAG00000003558	HTATSF1	97	63.573	ENSORLG00015002268	htatsf1	93	63.109	Oryzias_latipes_hsok
ENSMGAG00000003558	HTATSF1	99	64.073	ENSOMEG00000007564	htatsf1	95	64.073	Oryzias_melastigma
ENSMGAG00000003558	HTATSF1	97	62.053	ENSPKIG00000024852	htatsf1	93	62.053	Paramormyrops_kingsleyae
ENSMGAG00000003558	HTATSF1	82	82.436	ENSPSIG00000010192	HTATSF1	99	82.436	Pelodiscus_sinensis
ENSMGAG00000003558	HTATSF1	98	62.529	ENSPMGG00000006172	htatsf1	94	62.529	Periophthalmus_magnuspinnatus
ENSMGAG00000003558	HTATSF1	97	67.626	ENSPCIG00000018896	-	92	67.626	Phascolarctos_cinereus
ENSMGAG00000003558	HTATSF1	90	74.160	ENSPCIG00000030173	-	79	78.977	Phascolarctos_cinereus
ENSMGAG00000003558	HTATSF1	99	62.759	ENSPFOG00000007871	htatsf1	92	61.697	Poecilia_formosa
ENSMGAG00000003558	HTATSF1	99	61.098	ENSPLAG00000007532	htatsf1	95	61.009	Poecilia_latipinna
ENSMGAG00000003558	HTATSF1	99	63.218	ENSPMEG00000000352	htatsf1	95	62.156	Poecilia_mexicana
ENSMGAG00000003558	HTATSF1	99	63.073	ENSPREG00000007811	htatsf1	95	61.785	Poecilia_reticulata
ENSMGAG00000003558	HTATSF1	97	61.894	ENSPNYG00000016693	htatsf1	93	62.037	Pundamilia_nyererei
ENSMGAG00000003558	HTATSF1	97	62.415	ENSPNAG00000006166	htatsf1	94	63.098	Pygocentrus_nattereri
ENSMGAG00000003558	HTATSF1	53	32.099	YNL286W	-	80	31.799	Saccharomyces_cerevisiae
ENSMGAG00000003558	HTATSF1	85	76.164	ENSSHAG00000006440	-	90	77.119	Sarcophilus_harrisii
ENSMGAG00000003558	HTATSF1	98	71.496	ENSSHAG00000018908	-	90	71.496	Sarcophilus_harrisii
ENSMGAG00000003558	HTATSF1	97	60.690	ENSSFOG00015012002	htatsf1	93	61.098	Scleropages_formosus
ENSMGAG00000003558	HTATSF1	97	61.215	ENSSMAG00000002970	htatsf1	93	61.215	Scophthalmus_maximus
ENSMGAG00000003558	HTATSF1	77	67.251	ENSSDUG00000020002	htatsf1	80	66.864	Seriola_dumerili
ENSMGAG00000003558	HTATSF1	97	61.449	ENSSLDG00000016880	htatsf1	93	61.449	Seriola_lalandi_dorsalis
ENSMGAG00000003558	HTATSF1	90	65.722	ENSSARG00000005193	HTATSF1	52	65.722	Sorex_araneus
ENSMGAG00000003558	HTATSF1	99	75.410	ENSSPUG00000014767	HTATSF1	94	75.410	Sphenodon_punctatus
ENSMGAG00000003558	HTATSF1	97	59.813	ENSSPAG00000000732	htatsf1	93	59.813	Stegastes_partitus
ENSMGAG00000003558	HTATSF1	82	72.805	ENSSSCG00000023062	HTATSF1	62	62.500	Sus_scrofa
ENSMGAG00000003558	HTATSF1	99	91.549	ENSTGUG00000002099	HTATSF1	94	91.549	Taeniopygia_guttata
ENSMGAG00000003558	HTATSF1	98	62.558	ENSTRUG00000013383	htatsf1	93	62.558	Takifugu_rubripes
ENSMGAG00000003558	HTATSF1	98	62.356	ENSTNIG00000016140	htatsf1	93	62.356	Tetraodon_nigroviridis
ENSMGAG00000003558	HTATSF1	77	72.340	ENSTTRG00000002269	HTATSF1	54	72.340	Tursiops_truncatus
ENSMGAG00000003558	HTATSF1	99	65.187	ENSXETG00000019749	htatsf1	80	65.187	Xenopus_tropicalis
ENSMGAG00000003558	HTATSF1	99	58.824	ENSXCOG00000006912	htatsf1	95	57.952	Xiphophorus_couchianus
ENSMGAG00000003558	HTATSF1	99	64.637	ENSXMAG00000000490	htatsf1	94	63.700	Xiphophorus_maculatus