EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000003674 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 13901 bases
Position: chr22:5510519-5524419
Accession: 15797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000003564	PABP	PF00658.18	1.9e-29	1	1
ENSMGAP00000003564	RRM_1	PF00076.22	2.6e-88	1	4
ENSMGAP00000003564	RRM_1	PF00076.22	2.6e-88	2	4
ENSMGAP00000003564	RRM_1	PF00076.22	2.6e-88	3	4
ENSMGAP00000003564	RRM_1	PF00076.22	2.6e-88	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000004268	PABPC1L-201	1878	-	ENSMGAP00000003564	626 (aa)	-	G1MXJ1

Gene Model

Click here to download ENSMGAG00000003674's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03013	RNA transport	KEGG
mgp03015	mRNA surveillance pathway	KEGG
mgp03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000003674	PABPC1L	62	33.735	ENSMGAG00000010928	ELAVL4	87	33.735
ENSMGAG00000003674	PABPC1L	58	35.165	ENSMGAG00000004551	CELF2	58	34.884
ENSMGAG00000003674	PABPC1L	56	31.739	ENSMGAG00000008147	-	81	31.739
ENSMGAG00000003674	PABPC1L	59	32.143	ENSMGAG00000001015	ELAVL1	99	35.870
ENSMGAG00000003674	PABPC1L	99	71.880	ENSMGAG00000012239	PABPC1	98	71.880
ENSMGAG00000003674	PABPC1L	58	36.508	ENSMGAG00000000653	SF3B4	57	36.508
ENSMGAG00000003674	PABPC1L	98	67.581	ENSMGAG00000005408	PABPC4	99	68.439

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003674	PABPC1L	98	74.880	ENSG00000101104	PABPC1L	98	83.025	Homo_sapiens
ENSMGAG00000003674	PABPC1L	99	70.353	ENSAPOG00000010842	pabpc1l	99	70.353	Acanthochromis_polyacanthus
ENSMGAG00000003674	PABPC1L	98	69.160	ENSAMEG00000004099	PABPC1L	100	70.308	Ailuropoda_melanoleuca
ENSMGAG00000003674	PABPC1L	98	77.561	ENSACIG00000021004	-	99	77.561	Amphilophus_citrinellus
ENSMGAG00000003674	PABPC1L	99	69.952	ENSAOCG00000006167	-	99	70.270	Amphiprion_ocellaris
ENSMGAG00000003674	PABPC1L	99	75.721	ENSAPEG00000010558	-	99	82.160	Amphiprion_percula
ENSMGAG00000003674	PABPC1L	99	72.480	ENSATEG00000007428	pabpc1l	99	72.480	Anabas_testudineus
ENSMGAG00000003674	PABPC1L	97	89.919	ENSAPLG00000008415	PABPC1L	99	89.694	Anas_platyrhynchos
ENSMGAG00000003674	PABPC1L	100	83.912	ENSACAG00000011841	PABPC1L	99	83.912	Anolis_carolinensis
ENSMGAG00000003674	PABPC1L	98	74.557	ENSANAG00000026826	PABPC1L	99	74.557	Aotus_nancymaae
ENSMGAG00000003674	PABPC1L	99	72.496	ENSACLG00000024791	pabpc1l	99	72.496	Astatotilapia_calliptera
ENSMGAG00000003674	PABPC1L	99	75.758	ENSAMXG00000013552	pabpc1l	99	75.758	Astyanax_mexicanus
ENSMGAG00000003674	PABPC1L	58	92.857	ENSBTAG00000055300	-	100	92.857	Bos_taurus
ENSMGAG00000003674	PABPC1L	65	70.714	ENSBTAG00000016849	PABPC1L	86	70.714	Bos_taurus
ENSMGAG00000003674	PABPC1L	98	75.040	ENSCJAG00000017628	PABPC1L	99	75.040	Callithrix_jacchus
ENSMGAG00000003674	PABPC1L	58	81.609	ENSCJAG00000038506	-	100	81.609	Callithrix_jacchus
ENSMGAG00000003674	PABPC1L	98	70.124	ENSCAFG00000009573	PABPC1L	100	70.124	Canis_familiaris
ENSMGAG00000003674	PABPC1L	98	74.718	ENSCAFG00020013828	PABPC1L	99	74.718	Canis_lupus_dingo
ENSMGAG00000003674	PABPC1L	97	73.856	ENSCHIG00000025759	PABPC1L	88	74.237	Capra_hircus
ENSMGAG00000003674	PABPC1L	98	74.272	ENSTSYG00000006645	PABPC1L	99	74.272	Carlito_syrichta
ENSMGAG00000003674	PABPC1L	97	69.091	ENSCAPG00000014519	PABPC1L	99	69.091	Cavia_aperea
ENSMGAG00000003674	PABPC1L	98	72.186	ENSCPOG00000013633	PABPC1L	99	72.186	Cavia_porcellus
ENSMGAG00000003674	PABPC1L	98	74.879	ENSCCAG00000023338	PABPC1L	99	74.879	Cebus_capucinus
ENSMGAG00000003674	PABPC1L	98	75.523	ENSCATG00000034065	PABPC1L	99	75.523	Cercocebus_atys
ENSMGAG00000003674	PABPC1L	98	72.364	ENSCLAG00000005298	PABPC1L	99	72.596	Chinchilla_lanigera
ENSMGAG00000003674	PABPC1L	98	75.201	ENSCSAG00000014242	PABPC1L	99	75.201	Chlorocebus_sabaeus
ENSMGAG00000003674	PABPC1L	56	83.582	ENSCPBG00000007810	-	96	83.582	Chrysemys_picta_bellii
ENSMGAG00000003674	PABPC1L	71	93.919	ENSCPBG00000017755	-	99	93.919	Chrysemys_picta_bellii
ENSMGAG00000003674	PABPC1L	97	51.594	ENSCING00000002796	-	97	51.594	Ciona_intestinalis
ENSMGAG00000003674	PABPC1L	99	58.552	ENSCSAVG00000004246	-	90	72.857	Ciona_savignyi
ENSMGAG00000003674	PABPC1L	99	57.704	ENSCSAVG00000003102	-	100	82.550	Ciona_savignyi
ENSMGAG00000003674	PABPC1L	98	71.111	ENSCANG00000037530	PABPC1L	99	71.111	Colobus_angolensis_palliatus
ENSMGAG00000003674	PABPC1L	99	66.614	ENSCGRG00001021938	Pabpc1l	99	66.614	Cricetulus_griseus_chok1gshd
ENSMGAG00000003674	PABPC1L	99	66.614	ENSCGRG00000007946	Pabpc1l	99	66.614	Cricetulus_griseus_crigri
ENSMGAG00000003674	PABPC1L	98	66.396	ENSCSEG00000021295	pabpc1l	99	66.396	Cynoglossus_semilaevis
ENSMGAG00000003674	PABPC1L	99	71.955	ENSCVAG00000015943	-	86	87.786	Cyprinodon_variegatus
ENSMGAG00000003674	PABPC1L	99	74.003	ENSDARG00000002597	pabpc1l	88	88.462	Danio_rerio
ENSMGAG00000003674	PABPC1L	98	76.661	ENSDNOG00000048450	PABPC1L	99	76.661	Dasypus_novemcinctus
ENSMGAG00000003674	PABPC1L	98	72.464	ENSDORG00000001067	Pabpc1l	99	72.464	Dipodomys_ordii
ENSMGAG00000003674	PABPC1L	94	82.927	ENSETEG00000009969	PABPC1L	72	82.927	Echinops_telfairi
ENSMGAG00000003674	PABPC1L	52	82.635	ENSEASG00005023407	-	67	82.635	Equus_asinus_asinus
ENSMGAG00000003674	PABPC1L	58	91.667	ENSEASG00005023408	-	100	91.667	Equus_asinus_asinus
ENSMGAG00000003674	PABPC1L	65	77.974	ENSECAG00000040139	-	81	77.974	Equus_caballus
ENSMGAG00000003674	PABPC1L	99	72.071	ENSEEUG00000005978	PABPC1L	99	72.303	Erinaceus_europaeus
ENSMGAG00000003674	PABPC1L	99	79.817	ENSELUG00000001811	pabpc1l	99	79.817	Esox_lucius
ENSMGAG00000003674	PABPC1L	98	75.523	ENSFCAG00000011692	PABPC1L	99	75.281	Felis_catus
ENSMGAG00000003674	PABPC1L	83	89.564	ENSFALG00000005372	PABPC1L	89	89.564	Ficedula_albicollis
ENSMGAG00000003674	PABPC1L	98	70.880	ENSFDAG00000008291	PABPC1L	99	70.880	Fukomys_damarensis
ENSMGAG00000003674	PABPC1L	99	72.596	ENSFHEG00000003398	pabpc1l	99	72.596	Fundulus_heteroclitus
ENSMGAG00000003674	PABPC1L	99	73.312	ENSGMOG00000004437	pabpc1l	99	73.312	Gadus_morhua
ENSMGAG00000003674	PABPC1L	99	98.104	ENSGALG00000004123	PABPC1L	98	99.516	Gallus_gallus
ENSMGAG00000003674	PABPC1L	99	68.533	ENSGAFG00000021057	pabpc1l	99	68.533	Gambusia_affinis
ENSMGAG00000003674	PABPC1L	99	70.860	ENSGACG00000002792	pabpc1l	100	70.860	Gasterosteus_aculeatus
ENSMGAG00000003674	PABPC1L	100	90.090	ENSGAGG00000000589	PABPC1L	99	89.100	Gopherus_agassizii
ENSMGAG00000003674	PABPC1L	98	74.880	ENSGGOG00000004584	PABPC1L	99	74.880	Gorilla_gorilla
ENSMGAG00000003674	PABPC1L	99	72.496	ENSHBUG00000006134	pabpc1l	99	72.496	Haplochromis_burtoni
ENSMGAG00000003674	PABPC1L	98	73.151	ENSHGLG00000008434	PABPC1L	99	73.151	Heterocephalus_glaber_female
ENSMGAG00000003674	PABPC1L	58	87.079	ENSHGLG00100019506	-	100	87.079	Heterocephalus_glaber_male
ENSMGAG00000003674	PABPC1L	98	73.151	ENSHGLG00100012151	PABPC1L	99	73.151	Heterocephalus_glaber_male
ENSMGAG00000003674	PABPC1L	98	69.983	ENSHCOG00000009270	pabpc1l	99	69.983	Hippocampus_comes
ENSMGAG00000003674	PABPC1L	58	62.644	ENSIPUG00000006760	-	88	62.644	Ictalurus_punctatus
ENSMGAG00000003674	PABPC1L	58	63.218	ENSIPUG00000006780	-	85	63.218	Ictalurus_punctatus
ENSMGAG00000003674	PABPC1L	99	76.789	ENSIPUG00000012602	pabpc1l	99	76.789	Ictalurus_punctatus
ENSMGAG00000003674	PABPC1L	98	74.110	ENSSTOG00000003739	PABPC1L	99	74.110	Ictidomys_tridecemlineatus
ENSMGAG00000003674	PABPC1L	98	58.824	ENSJJAG00000022406	Pabpc1l	99	58.824	Jaculus_jaculus
ENSMGAG00000003674	PABPC1L	99	71.865	ENSKMAG00000016847	pabpc1l	100	71.865	Kryptolebias_marmoratus
ENSMGAG00000003674	PABPC1L	99	70.588	ENSLBEG00000010084	pabpc1l	99	70.588	Labrus_bergylta
ENSMGAG00000003674	PABPC1L	99	75.545	ENSLACG00000005762	PABPC1L	99	78.821	Latimeria_chalumnae
ENSMGAG00000003674	PABPC1L	99	77.937	ENSLOCG00000007519	pabpc1l	99	77.937	Lepisosteus_oculatus
ENSMGAG00000003674	PABPC1L	98	74.441	ENSLAFG00000003553	PABPC1L	100	74.441	Loxodonta_africana
ENSMGAG00000003674	PABPC1L	98	75.523	ENSMFAG00000040365	PABPC1L	99	75.523	Macaca_fascicularis
ENSMGAG00000003674	PABPC1L	98	73.591	ENSMNEG00000032298	PABPC1L	99	73.591	Macaca_nemestrina
ENSMGAG00000003674	PABPC1L	98	75.523	ENSMLEG00000043139	PABPC1L	99	75.523	Mandrillus_leucophaeus
ENSMGAG00000003674	PABPC1L	96	72.397	ENSMAMG00000011854	pabpc1l	94	72.572	Mastacembelus_armatus
ENSMGAG00000003674	PABPC1L	99	72.496	ENSMZEG00005023713	pabpc1l	99	72.496	Maylandia_zebra
ENSMGAG00000003674	PABPC1L	99	65.924	ENSMOCG00000013186	Pabpc1l	99	65.924	Microtus_ochrogaster
ENSMGAG00000003674	PABPC1L	99	72.231	ENSMMOG00000020574	-	90	88.462	Mola_mola
ENSMGAG00000003674	PABPC1L	96	78.618	ENSMODG00000016198	PABPC1L	99	78.618	Monodelphis_domestica
ENSMGAG00000003674	PABPC1L	96	71.546	ENSMALG00000021622	pabpc1l	100	71.382	Monopterus_albus
ENSMGAG00000003674	PABPC1L	99	66.933	MGP_CAROLIEiJ_G0024627	Pabpc1l	99	66.933	Mus_caroli
ENSMGAG00000003674	PABPC1L	99	66.773	ENSMUSG00000054582	Pabpc1l	99	66.773	Mus_musculus
ENSMGAG00000003674	PABPC1L	99	67.572	MGP_PahariEiJ_G0026071	Pabpc1l	99	67.572	Mus_pahari
ENSMGAG00000003674	PABPC1L	99	66.933	MGP_SPRETEiJ_G0025549	Pabpc1l	99	66.933	Mus_spretus
ENSMGAG00000003674	PABPC1L	98	75.845	ENSMPUG00000017646	PABPC1L	99	75.602	Mustela_putorius_furo
ENSMGAG00000003674	PABPC1L	97	71.132	ENSMLUG00000006324	PABPC1L	98	71.132	Myotis_lucifugus
ENSMGAG00000003674	PABPC1L	98	68.371	ENSNGAG00000010458	Pabpc1l	99	68.371	Nannospalax_galili
ENSMGAG00000003674	PABPC1L	98	77.404	ENSNBRG00000016633	pabpc1l	99	77.404	Neolamprologus_brichardi
ENSMGAG00000003674	PABPC1L	89	73.070	ENSMEUG00000007905	-	89	73.070	Notamacropus_eugenii
ENSMGAG00000003674	PABPC1L	98	72.320	ENSOPRG00000011846	PABPC1L	99	72.320	Ochotona_princeps
ENSMGAG00000003674	PABPC1L	98	66.181	ENSODEG00000015482	PABPC1L	99	66.181	Octodon_degus
ENSMGAG00000003674	PABPC1L	57	80.000	ENSODEG00000002920	-	97	80.000	Octodon_degus
ENSMGAG00000003674	PABPC1L	99	72.655	ENSONIG00000017314	pabpc1l	99	72.655	Oreochromis_niloticus
ENSMGAG00000003674	PABPC1L	89	67.857	ENSOANG00000015793	-	100	67.857	Ornithorhynchus_anatinus
ENSMGAG00000003674	PABPC1L	98	70.154	ENSOCUG00000003005	PABPC1L	99	70.154	Oryctolagus_cuniculus
ENSMGAG00000003674	PABPC1L	97	76.334	ENSORLG00000010322	pabpc1l	99	76.334	Oryzias_latipes
ENSMGAG00000003674	PABPC1L	97	76.334	ENSORLG00020021193	pabpc1l	99	76.334	Oryzias_latipes_hni
ENSMGAG00000003674	PABPC1L	97	76.334	ENSORLG00015017018	pabpc1l	99	76.334	Oryzias_latipes_hsok
ENSMGAG00000003674	PABPC1L	99	68.389	ENSOMEG00000010789	pabpc1l	99	68.389	Oryzias_melastigma
ENSMGAG00000003674	PABPC1L	99	74.322	ENSOGAG00000032999	PABPC1L	99	74.322	Otolemur_garnettii
ENSMGAG00000003674	PABPC1L	98	74.519	ENSOARG00000004578	PABPC1L	99	74.519	Ovis_aries
ENSMGAG00000003674	PABPC1L	98	75.040	ENSPPAG00000039677	PABPC1L	99	75.040	Pan_paniscus
ENSMGAG00000003674	PABPC1L	62	73.765	ENSPPRG00000019327	-	98	73.765	Panthera_pardus
ENSMGAG00000003674	PABPC1L	97	75.285	ENSPTIG00000006524	PABPC1L	99	75.041	Panthera_tigris_altaica
ENSMGAG00000003674	PABPC1L	62	83.333	ENSPTRG00000013531	PABPC1L	98	83.333	Pan_troglodytes
ENSMGAG00000003674	PABPC1L	98	75.523	ENSPANG00000018788	PABPC1L	99	75.523	Papio_anubis
ENSMGAG00000003674	PABPC1L	52	85.496	ENSPKIG00000016810	-	93	85.496	Paramormyrops_kingsleyae
ENSMGAG00000003674	PABPC1L	99	76.565	ENSPKIG00000007322	pabpc1l	99	76.565	Paramormyrops_kingsleyae
ENSMGAG00000003674	PABPC1L	66	94.712	ENSPSIG00000013289	PABPC1L	98	94.712	Pelodiscus_sinensis
ENSMGAG00000003674	PABPC1L	62	87.121	ENSPMGG00000023117	pabpc1l	97	83.721	Periophthalmus_magnuspinnatus
ENSMGAG00000003674	PABPC1L	71	67.317	ENSPMGG00000023121	-	95	67.317	Periophthalmus_magnuspinnatus
ENSMGAG00000003674	PABPC1L	98	65.610	ENSPEMG00000020671	Pabpc1l	99	66.242	Peromyscus_maniculatus_bairdii
ENSMGAG00000003674	PABPC1L	99	73.718	ENSPFOG00000013241	pabpc1l	99	73.718	Poecilia_formosa
ENSMGAG00000003674	PABPC1L	99	72.496	ENSPLAG00000017490	-	99	72.496	Poecilia_latipinna
ENSMGAG00000003674	PABPC1L	52	89.231	ENSPLAG00000023686	-	92	89.231	Poecilia_latipinna
ENSMGAG00000003674	PABPC1L	99	72.727	ENSPMEG00000007677	pabpc1l	99	72.727	Poecilia_mexicana
ENSMGAG00000003674	PABPC1L	52	89.231	ENSPMEG00000009185	-	88	89.231	Poecilia_mexicana
ENSMGAG00000003674	PABPC1L	66	82.082	ENSPREG00000015886	pabpc1l	99	82.082	Poecilia_reticulata
ENSMGAG00000003674	PABPC1L	98	75.684	ENSPPYG00000011042	PABPC1L	99	75.684	Pongo_abelii
ENSMGAG00000003674	PABPC1L	60	93.750	ENSPCAG00000011787	-	75	93.750	Procavia_capensis
ENSMGAG00000003674	PABPC1L	99	75.602	ENSPCOG00000020630	PABPC1L	100	75.602	Propithecus_coquereli
ENSMGAG00000003674	PABPC1L	99	73.355	ENSPVAG00000012663	PABPC1L	99	73.355	Pteropus_vampyrus
ENSMGAG00000003674	PABPC1L	98	77.404	ENSPNYG00000004101	pabpc1l	99	77.404	Pundamilia_nyererei
ENSMGAG00000003674	PABPC1L	99	69.427	ENSPNAG00000021248	pabpc1l	99	69.427	Pygocentrus_nattereri
ENSMGAG00000003674	PABPC1L	99	66.296	ENSRNOG00000012750	Pabpc1l	99	66.296	Rattus_norvegicus
ENSMGAG00000003674	PABPC1L	98	75.649	ENSRBIG00000035381	PABPC1L	99	75.649	Rhinopithecus_bieti
ENSMGAG00000003674	PABPC1L	98	75.362	ENSRROG00000044498	PABPC1L	99	75.362	Rhinopithecus_roxellana
ENSMGAG00000003674	PABPC1L	98	74.718	ENSSBOG00000009532	-	99	74.718	Saimiri_boliviensis_boliviensis
ENSMGAG00000003674	PABPC1L	97	73.211	ENSSHAG00000011446	PABPC1L	100	73.211	Sarcophilus_harrisii
ENSMGAG00000003674	PABPC1L	98	77.724	ENSSFOG00015017304	pabpc1l	99	77.724	Scleropages_formosus
ENSMGAG00000003674	PABPC1L	98	77.551	ENSSMAG00000010516	pabpc1l	100	84.286	Scophthalmus_maximus
ENSMGAG00000003674	PABPC1L	99	72.524	ENSSDUG00000014743	pabpc1l	99	72.524	Seriola_dumerili
ENSMGAG00000003674	PABPC1L	97	77.885	ENSSLDG00000006981	pabpc1l	98	87.081	Seriola_lalandi_dorsalis
ENSMGAG00000003674	PABPC1L	100	84.700	ENSSPUG00000004233	PABPC1L	99	84.700	Sphenodon_punctatus
ENSMGAG00000003674	PABPC1L	99	66.074	ENSSPAG00000017137	pabpc1l	99	65.806	Stegastes_partitus
ENSMGAG00000003674	PABPC1L	99	74.038	ENSSSCG00000007382	PABPC1L	99	74.038	Sus_scrofa
ENSMGAG00000003674	PABPC1L	99	87.717	ENSTGUG00000005114	PABPC1L	100	87.717	Taeniopygia_guttata
ENSMGAG00000003674	PABPC1L	96	71.732	ENSTRUG00000011085	pabpc1l	97	71.732	Takifugu_rubripes
ENSMGAG00000003674	PABPC1L	99	69.793	ENSTNIG00000017903	pabpc1l	99	69.793	Tetraodon_nigroviridis
ENSMGAG00000003674	PABPC1L	93	84.247	ENSTBEG00000002851	PABPC1L	79	84.247	Tupaia_belangeri
ENSMGAG00000003674	PABPC1L	93	73.208	ENSTTRG00000007618	PABPC1L	97	73.208	Tursiops_truncatus
ENSMGAG00000003674	PABPC1L	98	74.188	ENSUAMG00000017682	PABPC1L	99	73.948	Ursus_americanus
ENSMGAG00000003674	PABPC1L	65	82.173	ENSUMAG00000025436	PABPC1L	94	79.310	Ursus_maritimus
ENSMGAG00000003674	PABPC1L	97	81.028	ENSVVUG00000018939	PABPC1L	98	81.028	Vulpes_vulpes
ENSMGAG00000003674	PABPC1L	99	77.070	ENSXETG00000022831	pabpc1l	99	77.070	Xenopus_tropicalis
ENSMGAG00000003674	PABPC1L	97	77.698	ENSXCOG00000005459	pabpc1l	99	84.397	Xiphophorus_couchianus
ENSMGAG00000003674	PABPC1L	99	72.178	ENSXMAG00000017135	pabpc1l	99	72.178	Xiphophorus_maculatus