EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000003816 (Gene tree)
Gene ID: 100539189
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 14615 bases
Position: chr3:11900102-11914716
Accession: 100539189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000003623	RIO1	PF01163.22	2.8e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000004327	RIOK1-201	1732	XM_003204751	ENSMGAP00000003623	563 (aa)	XP_003204799	G1MXN3

Gene Model

Click here to download ENSMGAG00000003816's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000003816	RIOK1	50	44.483	ENSMGAG00000010079	RIOK3	56	44.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003816	RIOK1	100	75.088	ENSG00000124784	RIOK1	100	74.386	Homo_sapiens
ENSMGAG00000003816	RIOK1	57	66.562	ENSAPOG00000015632	riok1	99	68.421	Acanthochromis_polyacanthus
ENSMGAG00000003816	RIOK1	100	76.491	ENSAMEG00000017367	RIOK1	100	74.479	Ailuropoda_melanoleuca
ENSMGAG00000003816	RIOK1	88	71.862	ENSACIG00000003735	riok1	87	73.402	Amphilophus_citrinellus
ENSMGAG00000003816	RIOK1	99	66.429	ENSAOCG00000011818	riok1	100	67.082	Amphiprion_ocellaris
ENSMGAG00000003816	RIOK1	99	66.427	ENSAPEG00000001345	riok1	100	67.084	Amphiprion_percula
ENSMGAG00000003816	RIOK1	82	74.074	ENSATEG00000006594	riok1	99	73.856	Anabas_testudineus
ENSMGAG00000003816	RIOK1	84	94.068	ENSAPLG00000004196	RIOK1	100	94.068	Anas_platyrhynchos
ENSMGAG00000003816	RIOK1	100	76.720	ENSACAG00000000695	RIOK1	100	76.842	Anolis_carolinensis
ENSMGAG00000003816	RIOK1	100	66.667	ENSANAG00000023777	RIOK1	100	61.800	Aotus_nancymaae
ENSMGAG00000003816	RIOK1	98	68.705	ENSACLG00000015799	riok1	99	68.525	Astatotilapia_calliptera
ENSMGAG00000003816	RIOK1	99	71.080	ENSAMXG00000015286	riok1	99	70.157	Astyanax_mexicanus
ENSMGAG00000003816	RIOK1	100	74.868	ENSBTAG00000013821	RIOK1	100	72.902	Bos_taurus
ENSMGAG00000003816	RIOK1	78	46.785	WBGene00019698	riok-1	85	47.807	Caenorhabditis_elegans
ENSMGAG00000003816	RIOK1	100	75.439	ENSCJAG00000042960	RIOK1	100	70.458	Callithrix_jacchus
ENSMGAG00000003816	RIOK1	100	76.316	ENSCAFG00000009563	RIOK1	100	75.263	Canis_familiaris
ENSMGAG00000003816	RIOK1	97	73.370	ENSCAFG00020013233	RIOK1	88	78.659	Canis_lupus_dingo
ENSMGAG00000003816	RIOK1	100	75.614	ENSCHIG00000001534	RIOK1	100	73.298	Capra_hircus
ENSMGAG00000003816	RIOK1	66	79.045	ENSTSYG00000011368	RIOK1	100	78.852	Carlito_syrichta
ENSMGAG00000003816	RIOK1	79	79.556	ENSCAPG00000008489	RIOK1	100	78.879	Cavia_aperea
ENSMGAG00000003816	RIOK1	98	73.741	ENSCPOG00000009882	RIOK1	100	70.101	Cavia_porcellus
ENSMGAG00000003816	RIOK1	100	75.176	ENSCCAG00000024061	RIOK1	100	70.628	Cebus_capucinus
ENSMGAG00000003816	RIOK1	100	75.614	ENSCATG00000001548	RIOK1	100	69.949	Cercocebus_atys
ENSMGAG00000003816	RIOK1	100	75.220	ENSCLAG00000003522	RIOK1	100	74.171	Chinchilla_lanigera
ENSMGAG00000003816	RIOK1	94	73.783	ENSCSAG00000007396	RIOK1	90	72.244	Chlorocebus_sabaeus
ENSMGAG00000003816	RIOK1	85	65.312	ENSCHOG00000001873	RIOK1	85	66.875	Choloepus_hoffmanni
ENSMGAG00000003816	RIOK1	94	79.434	ENSCPBG00000008685	RIOK1	91	79.434	Chrysemys_picta_bellii
ENSMGAG00000003816	RIOK1	100	75.439	ENSCANG00000032919	RIOK1	100	69.949	Colobus_angolensis_palliatus
ENSMGAG00000003816	RIOK1	100	71.678	ENSCGRG00001018868	Riok1	100	69.217	Cricetulus_griseus_chok1gshd
ENSMGAG00000003816	RIOK1	100	71.678	ENSCGRG00000008015	Riok1	100	69.217	Cricetulus_griseus_crigri
ENSMGAG00000003816	RIOK1	88	50.600	ENSCSEG00000015014	riok1	86	51.837	Cynoglossus_semilaevis
ENSMGAG00000003816	RIOK1	57	65.528	ENSCVAG00000011291	riok1	99	65.528	Cyprinodon_variegatus
ENSMGAG00000003816	RIOK1	99	68.806	ENSDARG00000016399	riok1	100	68.449	Danio_rerio
ENSMGAG00000003816	RIOK1	100	75.958	ENSDNOG00000015813	RIOK1	100	75.087	Dasypus_novemcinctus
ENSMGAG00000003816	RIOK1	100	74.301	ENSDORG00000008530	Riok1	100	74.126	Dipodomys_ordii
ENSMGAG00000003816	RIOK1	77	53.437	FBgn0036187	RIOK1	82	51.509	Drosophila_melanogaster
ENSMGAG00000003816	RIOK1	100	74.296	ENSETEG00000020273	RIOK1	100	73.814	Echinops_telfairi
ENSMGAG00000003816	RIOK1	98	64.464	ENSEBUG00000013672	riok1	98	64.464	Eptatretus_burgeri
ENSMGAG00000003816	RIOK1	94	74.859	ENSEASG00005012032	RIOK1	86	78.484	Equus_asinus_asinus
ENSMGAG00000003816	RIOK1	100	75.571	ENSECAG00000009007	RIOK1	100	74.301	Equus_caballus
ENSMGAG00000003816	RIOK1	75	69.882	ENSEEUG00000007123	RIOK1	91	71.250	Erinaceus_europaeus
ENSMGAG00000003816	RIOK1	99	68.571	ENSELUG00000017029	riok1	99	68.515	Esox_lucius
ENSMGAG00000003816	RIOK1	100	74.781	ENSFCAG00000027290	RIOK1	100	73.438	Felis_catus
ENSMGAG00000003816	RIOK1	100	86.396	ENSFALG00000013244	RIOK1	100	86.972	Ficedula_albicollis
ENSMGAG00000003816	RIOK1	100	74.386	ENSFDAG00000019139	RIOK1	100	73.333	Fukomys_damarensis
ENSMGAG00000003816	RIOK1	67	78.684	ENSFHEG00000021419	riok1	98	69.518	Fundulus_heteroclitus
ENSMGAG00000003816	RIOK1	73	72.330	ENSGMOG00000018668	riok1	94	73.201	Gadus_morhua
ENSMGAG00000003816	RIOK1	57	94.769	ENSGALG00000012795	RIOK1	100	97.266	Gallus_gallus
ENSMGAG00000003816	RIOK1	84	62.579	ENSGAFG00000004091	riok1	79	62.422	Gambusia_affinis
ENSMGAG00000003816	RIOK1	85	72.083	ENSGACG00000002496	riok1	94	72.279	Gasterosteus_aculeatus
ENSMGAG00000003816	RIOK1	82	82.112	ENSGAGG00000002262	RIOK1	98	82.112	Gopherus_agassizii
ENSMGAG00000003816	RIOK1	89	74.815	ENSGGOG00000011037	RIOK1	100	76.296	Gorilla_gorilla
ENSMGAG00000003816	RIOK1	100	73.498	ENSHGLG00000008699	RIOK1	100	72.566	Heterocephalus_glaber_female
ENSMGAG00000003816	RIOK1	100	73.675	ENSHGLG00100008188	RIOK1	100	72.743	Heterocephalus_glaber_male
ENSMGAG00000003816	RIOK1	88	69.261	ENSHCOG00000013275	riok1	88	71.368	Hippocampus_comes
ENSMGAG00000003816	RIOK1	99	69.596	ENSIPUG00000003290	riok1	100	69.136	Ictalurus_punctatus
ENSMGAG00000003816	RIOK1	100	73.473	ENSSTOG00000009289	RIOK1	100	73.739	Ictidomys_tridecemlineatus
ENSMGAG00000003816	RIOK1	100	74.868	ENSJJAG00000015152	Riok1	100	74.074	Jaculus_jaculus
ENSMGAG00000003816	RIOK1	69	76.350	ENSKMAG00000019378	riok1	99	76.350	Kryptolebias_marmoratus
ENSMGAG00000003816	RIOK1	88	72.379	ENSLBEG00000016650	riok1	86	73.211	Labrus_bergylta
ENSMGAG00000003816	RIOK1	100	66.608	ENSLACG00000000300	RIOK1	100	65.112	Latimeria_chalumnae
ENSMGAG00000003816	RIOK1	100	72.743	ENSLOCG00000011728	riok1	100	72.566	Lepisosteus_oculatus
ENSMGAG00000003816	RIOK1	100	75.704	ENSLAFG00000005504	RIOK1	100	74.911	Loxodonta_africana
ENSMGAG00000003816	RIOK1	100	75.088	ENSMFAG00000029990	RIOK1	100	69.440	Macaca_fascicularis
ENSMGAG00000003816	RIOK1	100	74.912	ENSMMUG00000015577	RIOK1	100	69.270	Macaca_mulatta
ENSMGAG00000003816	RIOK1	100	72.105	ENSMNEG00000034396	RIOK1	99	71.340	Macaca_nemestrina
ENSMGAG00000003816	RIOK1	100	75.614	ENSMLEG00000026327	RIOK1	100	69.949	Mandrillus_leucophaeus
ENSMGAG00000003816	RIOK1	98	68.036	ENSMAMG00000019557	riok1	99	65.854	Mastacembelus_armatus
ENSMGAG00000003816	RIOK1	98	68.402	ENSMZEG00005019482	riok1	99	68.223	Maylandia_zebra
ENSMGAG00000003816	RIOK1	100	72.056	ENSMAUG00000012751	Riok1	100	69.739	Mesocricetus_auratus
ENSMGAG00000003816	RIOK1	100	75.528	ENSMICG00000044301	RIOK1	84	71.017	Microcebus_murinus
ENSMGAG00000003816	RIOK1	100	70.351	ENSMOCG00000017032	Riok1	100	69.947	Microtus_ochrogaster
ENSMGAG00000003816	RIOK1	84	63.905	ENSMMOG00000020598	riok1	87	64.300	Mola_mola
ENSMGAG00000003816	RIOK1	100	72.964	ENSMODG00000009964	RIOK1	100	74.120	Monodelphis_domestica
ENSMGAG00000003816	RIOK1	88	65.385	ENSMALG00000019982	riok1	89	67.653	Monopterus_albus
ENSMGAG00000003816	RIOK1	100	71.479	MGP_CAROLIEiJ_G0018439	Riok1	100	70.246	Mus_caroli
ENSMGAG00000003816	RIOK1	100	71.178	ENSMUSG00000021428	Riok1	100	69.894	Mus_musculus
ENSMGAG00000003816	RIOK1	100	70.537	MGP_PahariEiJ_G0019507	Riok1	100	69.894	Mus_pahari
ENSMGAG00000003816	RIOK1	100	70.979	MGP_SPRETEiJ_G0019319	Riok1	100	69.894	Mus_spretus
ENSMGAG00000003816	RIOK1	100	76.532	ENSMPUG00000000570	RIOK1	100	75.657	Mustela_putorius_furo
ENSMGAG00000003816	RIOK1	100	74.561	ENSMLUG00000015312	RIOK1	100	73.124	Myotis_lucifugus
ENSMGAG00000003816	RIOK1	100	74.564	ENSNGAG00000021734	Riok1	100	71.795	Nannospalax_galili
ENSMGAG00000003816	RIOK1	70	80.556	ENSNBRG00000017489	riok1	76	80.556	Neolamprologus_brichardi
ENSMGAG00000003816	RIOK1	100	66.031	ENSNLEG00000011621	RIOK1	100	64.177	Nomascus_leucogenys
ENSMGAG00000003816	RIOK1	84	52.643	ENSMEUG00000006679	-	84	52.643	Notamacropus_eugenii
ENSMGAG00000003816	RIOK1	66	78.706	ENSOPRG00000009524	RIOK1	100	78.706	Ochotona_princeps
ENSMGAG00000003816	RIOK1	71	62.439	ENSODEG00000005663	RIOK1	100	66.089	Octodon_degus
ENSMGAG00000003816	RIOK1	98	69.801	ENSONIG00000014010	riok1	98	69.259	Oreochromis_niloticus
ENSMGAG00000003816	RIOK1	82	82.543	ENSOANG00000012553	RIOK1	100	82.543	Ornithorhynchus_anatinus
ENSMGAG00000003816	RIOK1	100	73.252	ENSOCUG00000011824	RIOK1	100	73.427	Oryctolagus_cuniculus
ENSMGAG00000003816	RIOK1	98	67.754	ENSORLG00000008221	riok1	99	67.509	Oryzias_latipes
ENSMGAG00000003816	RIOK1	98	65.580	ENSORLG00020013838	riok1	70	66.304	Oryzias_latipes_hni
ENSMGAG00000003816	RIOK1	98	67.509	ENSORLG00015009817	riok1	98	68.231	Oryzias_latipes_hsok
ENSMGAG00000003816	RIOK1	98	67.504	ENSOMEG00000002758	riok1	88	67.690	Oryzias_melastigma
ENSMGAG00000003816	RIOK1	100	67.418	ENSOGAG00000010192	RIOK1	100	66.894	Otolemur_garnettii
ENSMGAG00000003816	RIOK1	100	74.216	ENSOARG00000017747	RIOK1	100	73.647	Ovis_aries
ENSMGAG00000003816	RIOK1	100	66.318	ENSPPAG00000016349	RIOK1	100	74.923	Pan_paniscus
ENSMGAG00000003816	RIOK1	100	74.781	ENSPPRG00000001932	RIOK1	100	73.785	Panthera_pardus
ENSMGAG00000003816	RIOK1	100	74.956	ENSPTIG00000018545	RIOK1	100	73.958	Panthera_tigris_altaica
ENSMGAG00000003816	RIOK1	100	74.737	ENSPTRG00000017700	RIOK1	100	74.035	Pan_troglodytes
ENSMGAG00000003816	RIOK1	100	75.439	ENSPANG00000016522	RIOK1	100	69.779	Papio_anubis
ENSMGAG00000003816	RIOK1	99	70.442	ENSPKIG00000006442	riok1	100	70.945	Paramormyrops_kingsleyae
ENSMGAG00000003816	RIOK1	100	80.600	ENSPSIG00000006488	RIOK1	99	80.944	Pelodiscus_sinensis
ENSMGAG00000003816	RIOK1	73	70.388	ENSPMGG00000017807	riok1	96	68.056	Periophthalmus_magnuspinnatus
ENSMGAG00000003816	RIOK1	87	77.846	ENSPEMG00000017844	Riok1	100	69.844	Peromyscus_maniculatus_bairdii
ENSMGAG00000003816	RIOK1	57	80.374	ENSPMAG00000006351	riok1	77	79.630	Petromyzon_marinus
ENSMGAG00000003816	RIOK1	94	75.283	ENSPCIG00000012653	RIOK1	88	77.374	Phascolarctos_cinereus
ENSMGAG00000003816	RIOK1	98	64.685	ENSPFOG00000011532	riok1	87	71.279	Poecilia_formosa
ENSMGAG00000003816	RIOK1	98	65.045	ENSPLAG00000001341	riok1	99	64.685	Poecilia_latipinna
ENSMGAG00000003816	RIOK1	98	64.685	ENSPMEG00000007710	riok1	89	71.488	Poecilia_mexicana
ENSMGAG00000003816	RIOK1	98	64.865	ENSPREG00000009237	riok1	99	64.144	Poecilia_reticulata
ENSMGAG00000003816	RIOK1	100	75.614	ENSPPYG00000016207	RIOK1	100	75.439	Pongo_abelii
ENSMGAG00000003816	RIOK1	100	65.845	ENSPCAG00000007892	RIOK1	100	64.789	Procavia_capensis
ENSMGAG00000003816	RIOK1	100	75.087	ENSPVAG00000014091	RIOK1	100	75.000	Pteropus_vampyrus
ENSMGAG00000003816	RIOK1	57	72.136	ENSPNYG00000004465	riok1	100	72.136	Pundamilia_nyererei
ENSMGAG00000003816	RIOK1	100	70.087	ENSPNAG00000015435	riok1	100	70.087	Pygocentrus_nattereri
ENSMGAG00000003816	RIOK1	100	71.754	ENSRNOG00000014049	Riok1	100	77.778	Rattus_norvegicus
ENSMGAG00000003816	RIOK1	100	75.263	ENSRBIG00000036685	RIOK1	100	69.779	Rhinopithecus_bieti
ENSMGAG00000003816	RIOK1	100	75.439	ENSRROG00000036611	RIOK1	100	69.949	Rhinopithecus_roxellana
ENSMGAG00000003816	RIOK1	63	40.369	YOR119C	RIO1	96	37.552	Saccharomyces_cerevisiae
ENSMGAG00000003816	RIOK1	100	75.260	ENSSBOG00000012588	RIOK1	100	75.263	Saimiri_boliviensis_boliviensis
ENSMGAG00000003816	RIOK1	85	78.054	ENSSHAG00000003091	RIOK1	93	78.054	Sarcophilus_harrisii
ENSMGAG00000003816	RIOK1	87	75.659	ENSSFOG00015001035	riok1	99	70.916	Scleropages_formosus
ENSMGAG00000003816	RIOK1	57	66.049	ENSSDUG00000007291	riok1	100	66.358	Seriola_dumerili
ENSMGAG00000003816	RIOK1	98	68.116	ENSSLDG00000017657	riok1	99	66.252	Seriola_lalandi_dorsalis
ENSMGAG00000003816	RIOK1	85	71.694	ENSSPUG00000007624	RIOK1	83	70.928	Sphenodon_punctatus
ENSMGAG00000003816	RIOK1	99	67.986	ENSSPAG00000022710	riok1	100	66.257	Stegastes_partitus
ENSMGAG00000003816	RIOK1	100	73.944	ENSSSCG00000001024	RIOK1	100	73.063	Sus_scrofa
ENSMGAG00000003816	RIOK1	100	86.140	ENSTGUG00000002331	RIOK1	100	86.491	Taeniopygia_guttata
ENSMGAG00000003816	RIOK1	77	62.014	ENSTRUG00000002854	riok1	95	65.306	Takifugu_rubripes
ENSMGAG00000003816	RIOK1	52	64.966	ENSTRUG00000001575	-	100	64.286	Takifugu_rubripes
ENSMGAG00000003816	RIOK1	98	60.714	ENSTNIG00000003078	riok1	87	65.226	Tetraodon_nigroviridis
ENSMGAG00000003816	RIOK1	100	73.124	ENSTBEG00000016730	RIOK1	100	72.028	Tupaia_belangeri
ENSMGAG00000003816	RIOK1	69	86.375	ENSTTRG00000017335	RIOK1	81	86.375	Tursiops_truncatus
ENSMGAG00000003816	RIOK1	90	77.495	ENSUAMG00000003721	RIOK1	87	78.252	Ursus_americanus
ENSMGAG00000003816	RIOK1	100	76.140	ENSUMAG00000018461	RIOK1	100	74.132	Ursus_maritimus
ENSMGAG00000003816	RIOK1	60	84.874	ENSVPAG00000010813	-	63	84.874	Vicugna_pacos
ENSMGAG00000003816	RIOK1	100	75.965	ENSVVUG00000005018	RIOK1	100	75.088	Vulpes_vulpes
ENSMGAG00000003816	RIOK1	88	74.343	ENSXETG00000020436	riok1	87	75.258	Xenopus_tropicalis
ENSMGAG00000003816	RIOK1	84	67.161	ENSXCOG00000000245	riok1	100	67.585	Xiphophorus_couchianus
ENSMGAG00000003816	RIOK1	84	65.481	ENSXMAG00000014572	riok1	78	74.564	Xiphophorus_maculatus