EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000003906 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 47860 bases
Position: chr20:3991212-4039071
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000003698	Ago_hook	PF10427.9	2.2e-17	1	1
ENSMGAP00000003698	RRM_1	PF00076.22	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000004404	TNRC6C-201	5622	-	ENSMGAP00000003698	1873 (aa)	-	G1MXT7

Gene Model

Click here to download ENSMGAG00000003906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000003906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000003906	TNRC6C	95	36.402	ENSMGAG00000012333	TNRC6B	98	36.423
ENSMGAG00000003906	TNRC6C	97	44.116	ENSMGAG00000006455	TNRC6A	94	43.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000003906	TNRC6C	100	80.775	ENSG00000078687	TNRC6C	100	90.526	Homo_sapiens
ENSMGAG00000003906	TNRC6C	64	66.071	ENSAPOG00000019749	tnrc6c1	93	67.500	Acanthochromis_polyacanthus
ENSMGAG00000003906	TNRC6C	94	80.643	ENSAMEG00000013756	TNRC6C	100	80.609	Ailuropoda_melanoleuca
ENSMGAG00000003906	TNRC6C	89	48.481	ENSACIG00000008075	tnrc6c1	98	49.897	Amphilophus_citrinellus
ENSMGAG00000003906	TNRC6C	62	65.476	ENSAOCG00000023968	tnrc6c1	93	67.143	Amphiprion_ocellaris
ENSMGAG00000003906	TNRC6C	64	64.885	ENSAPEG00000009020	tnrc6c1	93	67.925	Amphiprion_percula
ENSMGAG00000003906	TNRC6C	100	89.916	ENSAPLG00000005456	TNRC6C	100	89.916	Anas_platyrhynchos
ENSMGAG00000003906	TNRC6C	100	84.867	ENSACAG00000016198	TNRC6C	98	85.075	Anolis_carolinensis
ENSMGAG00000003906	TNRC6C	100	80.196	ENSANAG00000021554	TNRC6C	99	80.114	Aotus_nancymaae
ENSMGAG00000003906	TNRC6C	94	43.757	ENSACLG00000000424	tnrc6c1	99	48.195	Astatotilapia_calliptera
ENSMGAG00000003906	TNRC6C	96	82.637	ENSBTAG00000018658	TNRC6C	100	77.104	Bos_taurus
ENSMGAG00000003906	TNRC6C	100	80.093	ENSCJAG00000019431	TNRC6C	99	80.010	Callithrix_jacchus
ENSMGAG00000003906	TNRC6C	100	79.948	ENSCAFG00000005224	TNRC6C	99	79.969	Canis_familiaris
ENSMGAG00000003906	TNRC6C	100	79.514	ENSCAFG00020006661	TNRC6C	99	79.535	Canis_lupus_dingo
ENSMGAG00000003906	TNRC6C	100	76.819	ENSCHIG00000026004	TNRC6C	100	74.942	Capra_hircus
ENSMGAG00000003906	TNRC6C	90	80.493	ENSTSYG00000005403	TNRC6C	100	80.458	Carlito_syrichta
ENSMGAG00000003906	TNRC6C	99	72.581	ENSCAPG00000007307	TNRC6C	99	72.633	Cavia_aperea
ENSMGAG00000003906	TNRC6C	100	77.268	ENSCPOG00000000467	TNRC6C	100	77.212	Cavia_porcellus
ENSMGAG00000003906	TNRC6C	100	80.300	ENSCCAG00000030524	TNRC6C	100	79.897	Cebus_capucinus
ENSMGAG00000003906	TNRC6C	100	80.558	ENSCATG00000033135	TNRC6C	100	80.126	Cercocebus_atys
ENSMGAG00000003906	TNRC6C	100	78.676	ENSCLAG00000011139	TNRC6C	99	78.676	Chinchilla_lanigera
ENSMGAG00000003906	TNRC6C	100	80.893	ENSCSAG00000005167	TNRC6C	99	80.757	Chlorocebus_sabaeus
ENSMGAG00000003906	TNRC6C	72	79.225	ENSCHOG00000000088	TNRC6C	75	79.225	Choloepus_hoffmanni
ENSMGAG00000003906	TNRC6C	94	84.029	ENSCPBG00000027960	TNRC6C	100	84.122	Chrysemys_picta_bellii
ENSMGAG00000003906	TNRC6C	100	80.196	ENSCANG00000041771	TNRC6C	100	79.725	Colobus_angolensis_palliatus
ENSMGAG00000003906	TNRC6C	100	75.909	ENSCGRG00001022686	Tnrc6c	100	75.072	Cricetulus_griseus_chok1gshd
ENSMGAG00000003906	TNRC6C	100	76.330	ENSCGRG00000018041	Tnrc6c	93	83.012	Cricetulus_griseus_crigri
ENSMGAG00000003906	TNRC6C	90	73.180	ENSDARG00000076847	tnrc6c1	90	74.340	Danio_rerio
ENSMGAG00000003906	TNRC6C	100	78.557	ENSDNOG00000003247	TNRC6C	99	78.734	Dasypus_novemcinctus
ENSMGAG00000003906	TNRC6C	99	73.662	ENSDORG00000004558	Tnrc6c	100	73.766	Dipodomys_ordii
ENSMGAG00000003906	TNRC6C	84	74.699	ENSETEG00000005527	TNRC6C	90	74.699	Echinops_telfairi
ENSMGAG00000003906	TNRC6C	90	77.752	ENSEASG00005004799	TNRC6C	100	78.156	Equus_asinus_asinus
ENSMGAG00000003906	TNRC6C	100	79.522	ENSECAG00000012486	TNRC6C	99	79.439	Equus_caballus
ENSMGAG00000003906	TNRC6C	89	87.479	ENSEEUG00000010008	TNRC6C	96	87.479	Erinaceus_europaeus
ENSMGAG00000003906	TNRC6C	100	77.468	ENSFCAG00000028358	TNRC6C	99	77.543	Felis_catus
ENSMGAG00000003906	TNRC6C	90	86.338	ENSFALG00000000848	TNRC6C	100	86.572	Ficedula_albicollis
ENSMGAG00000003906	TNRC6C	93	78.331	ENSFDAG00000010368	TNRC6C	100	78.499	Fukomys_damarensis
ENSMGAG00000003906	TNRC6C	98	44.632	ENSFHEG00000002936	tnrc6c1	99	44.959	Fundulus_heteroclitus
ENSMGAG00000003906	TNRC6C	94	89.663	ENSGALG00000001725	TNRC6C	99	89.663	Gallus_gallus
ENSMGAG00000003906	TNRC6C	91	64.894	ENSGAFG00000019019	tnrc6c1	93	66.667	Gambusia_affinis
ENSMGAG00000003906	TNRC6C	63	64.982	ENSGACG00000012320	tnrc6c1	90	65.704	Gasterosteus_aculeatus
ENSMGAG00000003906	TNRC6C	94	85.011	ENSGAGG00000022043	TNRC6C	99	85.352	Gopherus_agassizii
ENSMGAG00000003906	TNRC6C	100	80.248	ENSGGOG00000011304	TNRC6C	100	79.553	Gorilla_gorilla
ENSMGAG00000003906	TNRC6C	91	67.376	ENSHBUG00000010846	tnrc6c1	93	67.730	Haplochromis_burtoni
ENSMGAG00000003906	TNRC6C	100	78.270	ENSHGLG00000004809	TNRC6C	99	78.426	Heterocephalus_glaber_female
ENSMGAG00000003906	TNRC6C	100	77.726	ENSHGLG00100012597	TNRC6C	99	77.882	Heterocephalus_glaber_male
ENSMGAG00000003906	TNRC6C	93	71.218	ENSIPUG00000000818	tnrc6c1	92	72.364	Ictalurus_punctatus
ENSMGAG00000003906	TNRC6C	100	77.282	ENSSTOG00000009101	TNRC6C	100	77.461	Ictidomys_tridecemlineatus
ENSMGAG00000003906	TNRC6C	100	75.583	ENSJJAG00000017055	Tnrc6c	93	83.012	Jaculus_jaculus
ENSMGAG00000003906	TNRC6C	80	66.415	ENSKMAG00000021023	tnrc6c1	90	68.284	Kryptolebias_marmoratus
ENSMGAG00000003906	TNRC6C	83	79.539	ENSLACG00000015283	TNRC6C	90	79.611	Latimeria_chalumnae
ENSMGAG00000003906	TNRC6C	50	64.415	ENSLOCG00000013377	tnrc6c1	93	75.564	Lepisosteus_oculatus
ENSMGAG00000003906	TNRC6C	100	78.553	ENSLAFG00000011122	TNRC6C	99	78.605	Loxodonta_africana
ENSMGAG00000003906	TNRC6C	100	80.662	ENSMFAG00000043943	TNRC6C	100	80.183	Macaca_fascicularis
ENSMGAG00000003906	TNRC6C	100	80.997	ENSMMUG00000011924	TNRC6C	100	78.621	Macaca_mulatta
ENSMGAG00000003906	TNRC6C	100	80.662	ENSMNEG00000030405	TNRC6C	99	80.527	Macaca_nemestrina
ENSMGAG00000003906	TNRC6C	100	80.662	ENSMLEG00000033436	TNRC6C	100	80.183	Mandrillus_leucophaeus
ENSMGAG00000003906	TNRC6C	85	49.554	ENSMAMG00000023613	tnrc6c1	93	67.384	Mastacembelus_armatus
ENSMGAG00000003906	TNRC6C	91	67.376	ENSMZEG00005010920	tnrc6c1	91	67.376	Maylandia_zebra
ENSMGAG00000003906	TNRC6C	90	75.989	ENSMAUG00000021618	Tnrc6c	100	75.989	Mesocricetus_auratus
ENSMGAG00000003906	TNRC6C	100	81.221	ENSMICG00000003952	TNRC6C	100	80.630	Microcebus_murinus
ENSMGAG00000003906	TNRC6C	100	77.686	ENSMOCG00000015879	Tnrc6c	100	77.728	Microtus_ochrogaster
ENSMGAG00000003906	TNRC6C	70	49.716	ENSMMOG00000005203	tnrc6c1	97	47.260	Mola_mola
ENSMGAG00000003906	TNRC6C	100	79.512	ENSMODG00000001785	TNRC6C	99	79.201	Monodelphis_domestica
ENSMGAG00000003906	TNRC6C	100	77.218	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	77.448	Mus_caroli
ENSMGAG00000003906	TNRC6C	100	76.803	ENSMUSG00000025571	Tnrc6c	94	83.398	Mus_musculus
ENSMGAG00000003906	TNRC6C	100	77.218	MGP_PahariEiJ_G0018593	Tnrc6c	100	77.392	Mus_pahari
ENSMGAG00000003906	TNRC6C	100	76.907	MGP_SPRETEiJ_G0018309	Tnrc6c	100	77.168	Mus_spretus
ENSMGAG00000003906	TNRC6C	100	77.535	ENSMPUG00000013348	TNRC6C	97	78.211	Mustela_putorius_furo
ENSMGAG00000003906	TNRC6C	100	74.151	ENSMLUG00000014431	TNRC6C	97	74.661	Myotis_lucifugus
ENSMGAG00000003906	TNRC6C	100	77.155	ENSNGAG00000012203	Tnrc6c	99	77.310	Nannospalax_galili
ENSMGAG00000003906	TNRC6C	87	67.376	ENSNBRG00000005344	tnrc6c1	93	67.376	Neolamprologus_brichardi
ENSMGAG00000003906	TNRC6C	99	78.468	ENSNLEG00000000047	TNRC6C	99	78.180	Nomascus_leucogenys
ENSMGAG00000003906	TNRC6C	83	86.224	ENSMEUG00000005104	TNRC6C	92	89.583	Notamacropus_eugenii
ENSMGAG00000003906	TNRC6C	90	78.341	ENSODEG00000012499	TNRC6C	100	78.514	Octodon_degus
ENSMGAG00000003906	TNRC6C	78	67.376	ENSONIG00000002210	tnrc6c1	90	67.730	Oreochromis_niloticus
ENSMGAG00000003906	TNRC6C	100	56.723	ENSOANG00000009758	-	94	85.328	Ornithorhynchus_anatinus
ENSMGAG00000003906	TNRC6C	50	73.283	ENSOCUG00000006122	TNRC6C	87	72.733	Oryctolagus_cuniculus
ENSMGAG00000003906	TNRC6C	87	65.950	ENSORLG00000009837	tnrc6c1	100	65.441	Oryzias_latipes
ENSMGAG00000003906	TNRC6C	50	53.783	ENSORLG00020016510	tnrc6c1	100	43.440	Oryzias_latipes_hni
ENSMGAG00000003906	TNRC6C	73	41.833	ENSORLG00015000171	tnrc6c1	95	43.860	Oryzias_latipes_hsok
ENSMGAG00000003906	TNRC6C	87	65.000	ENSOMEG00000000357	tnrc6c1	93	65.000	Oryzias_melastigma
ENSMGAG00000003906	TNRC6C	90	78.887	ENSOGAG00000007197	TNRC6C	100	78.739	Otolemur_garnettii
ENSMGAG00000003906	TNRC6C	96	74.865	ENSOARG00000006041	TNRC6C	97	74.946	Ovis_aries
ENSMGAG00000003906	TNRC6C	100	80.610	ENSPPAG00000027160	TNRC6C	100	80.069	Pan_paniscus
ENSMGAG00000003906	TNRC6C	100	77.468	ENSPPRG00000018881	TNRC6C	99	77.543	Panthera_pardus
ENSMGAG00000003906	TNRC6C	91	83.514	ENSPTIG00000008791	TNRC6C	86	83.554	Panthera_tigris_altaica
ENSMGAG00000003906	TNRC6C	100	80.662	ENSPTRG00000009699	TNRC6C	100	80.069	Pan_troglodytes
ENSMGAG00000003906	TNRC6C	100	80.662	ENSPANG00000019994	TNRC6C	99	80.527	Papio_anubis
ENSMGAG00000003906	TNRC6C	87	48.889	ENSPKIG00000005428	tnrc6c1	98	48.528	Paramormyrops_kingsleyae
ENSMGAG00000003906	TNRC6C	93	81.737	ENSPSIG00000018069	TNRC6C	100	82.073	Pelodiscus_sinensis
ENSMGAG00000003906	TNRC6C	56	47.068	ENSPMGG00000022911	tnrc6c1	97	61.633	Periophthalmus_magnuspinnatus
ENSMGAG00000003906	TNRC6C	100	77.063	ENSPEMG00000009785	Tnrc6c	99	77.374	Peromyscus_maniculatus_bairdii
ENSMGAG00000003906	TNRC6C	51	83.282	ENSPCIG00000017421	-	99	83.384	Phascolarctos_cinereus
ENSMGAG00000003906	TNRC6C	91	65.018	ENSPFOG00000012560	tnrc6c1	90	66.784	Poecilia_formosa
ENSMGAG00000003906	TNRC6C	80	65.018	ENSPLAG00000021055	tnrc6c1	90	66.784	Poecilia_latipinna
ENSMGAG00000003906	TNRC6C	100	81.049	ENSPPYG00000008679	TNRC6C	97	80.965	Pongo_abelii
ENSMGAG00000003906	TNRC6C	83	88.106	ENSPCAG00000012510	TNRC6C	91	88.462	Procavia_capensis
ENSMGAG00000003906	TNRC6C	90	80.963	ENSPCOG00000021451	TNRC6C	100	80.813	Propithecus_coquereli
ENSMGAG00000003906	TNRC6C	89	76.005	ENSPVAG00000002008	TNRC6C	96	76.256	Pteropus_vampyrus
ENSMGAG00000003906	TNRC6C	83	67.616	ENSPNYG00000014477	tnrc6c1	90	67.616	Pundamilia_nyererei
ENSMGAG00000003906	TNRC6C	90	76.481	ENSRNOG00000022395	Tnrc6c	100	76.711	Rattus_norvegicus
ENSMGAG00000003906	TNRC6C	100	80.558	ENSRBIG00000027777	TNRC6C	100	80.126	Rhinopithecus_bieti
ENSMGAG00000003906	TNRC6C	100	80.610	ENSRROG00000042912	TNRC6C	100	80.183	Rhinopithecus_roxellana
ENSMGAG00000003906	TNRC6C	100	79.990	ENSSBOG00000023981	TNRC6C	100	79.381	Saimiri_boliviensis_boliviensis
ENSMGAG00000003906	TNRC6C	87	64.748	ENSSMAG00000012761	tnrc6c1	93	67.266	Scophthalmus_maximus
ENSMGAG00000003906	TNRC6C	88	66.058	ENSSDUG00000002366	tnrc6c1	93	68.345	Seriola_dumerili
ENSMGAG00000003906	TNRC6C	78	66.187	ENSSLDG00000025613	tnrc6c1	90	68.345	Seriola_lalandi_dorsalis
ENSMGAG00000003906	TNRC6C	85	73.920	ENSSARG00000006816	TNRC6C	91	74.640	Sorex_araneus
ENSMGAG00000003906	TNRC6C	80	91.743	ENSSPUG00000007341	TNRC6C	98	91.743	Sphenodon_punctatus
ENSMGAG00000003906	TNRC6C	61	74.528	ENSSPAG00000014977	tnrc6c1	89	75.117	Stegastes_partitus
ENSMGAG00000003906	TNRC6C	90	72.779	ENSSSCG00000034373	TNRC6C	100	73.807	Sus_scrofa
ENSMGAG00000003906	TNRC6C	93	86.443	ENSTGUG00000007733	TNRC6C	100	86.611	Taeniopygia_guttata
ENSMGAG00000003906	TNRC6C	71	48.881	ENSTRUG00000011685	tnrc6c1	100	45.849	Takifugu_rubripes
ENSMGAG00000003906	TNRC6C	87	67.537	ENSTNIG00000005273	tnrc6c1	93	67.537	Tetraodon_nigroviridis
ENSMGAG00000003906	TNRC6C	58	76.969	ENSTBEG00000005046	TNRC6C	95	77.088	Tupaia_belangeri
ENSMGAG00000003906	TNRC6C	93	77.865	ENSTTRG00000010828	TNRC6C	99	77.921	Tursiops_truncatus
ENSMGAG00000003906	TNRC6C	99	77.749	ENSUMAG00000013614	TNRC6C	99	77.720	Ursus_maritimus
ENSMGAG00000003906	TNRC6C	90	78.168	ENSVVUG00000015268	TNRC6C	100	78.283	Vulpes_vulpes
ENSMGAG00000003906	TNRC6C	90	68.247	ENSXETG00000019470	tnrc6c	100	68.800	Xenopus_tropicalis
ENSMGAG00000003906	TNRC6C	91	67.176	ENSXMAG00000025971	tnrc6c1	93	68.679	Xiphophorus_maculatus