EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000004139 (Gene tree)
Gene ID: -
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 5914 bases
Position: chr9:4704338-4710251
Accession: 2484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000003936	RRM_1	PF00076.22	9.4e-11	1	1
ENSMGAP00000018245	RRM_1	PF00076.22	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000019797	CSTF2-202	1469	-	ENSMGAP00000018245	426 (aa)	-	G3URE1
ENSMGAT00000004646	CSTF2-201	1961	-	ENSMGAP00000003936	591 (aa)	-	G1MYC3

Gene Model

Click here to download ENSMGAG00000004139's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000004139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000004139	CSTF2	100	85.259	ENSG00000101811	CSTF2	84	86.243	Homo_sapiens
ENSMGAG00000004139	CSTF2	74	86.207	ENSAPOG00000005630	cstf2	86	70.732	Acanthochromis_polyacanthus
ENSMGAG00000004139	CSTF2	100	83.665	ENSAMEG00000002082	CSTF2	93	66.401	Ailuropoda_melanoleuca
ENSMGAG00000004139	CSTF2	100	55.675	ENSACIG00000012852	cstf2	82	84.615	Amphilophus_citrinellus
ENSMGAG00000004139	CSTF2	74	86.207	ENSAOCG00000020905	cstf2	86	70.732	Amphiprion_ocellaris
ENSMGAG00000004139	CSTF2	74	86.207	ENSAPEG00000006526	cstf2	86	70.732	Amphiprion_percula
ENSMGAG00000004139	CSTF2	78	69.512	ENSATEG00000018186	cstf2	90	67.857	Anabas_testudineus
ENSMGAG00000004139	CSTF2	100	97.638	ENSAPLG00000007255	CSTF2	80	90.756	Anas_platyrhynchos
ENSMGAG00000004139	CSTF2	100	84.064	ENSANAG00000022342	CSTF2	93	68.885	Aotus_nancymaae
ENSMGAG00000004139	CSTF2	76	77.143	ENSACLG00000000779	cstf2	81	77.143	Astatotilapia_calliptera
ENSMGAG00000004139	CSTF2	76	86.000	ENSAMXG00000021477	cstf2	84	100.000	Astyanax_mexicanus
ENSMGAG00000004139	CSTF2	100	81.673	ENSBTAG00000003547	CSTF2	93	68.289	Bos_taurus
ENSMGAG00000004139	CSTF2	100	84.064	ENSCJAG00000004422	CSTF2	90	79.157	Callithrix_jacchus
ENSMGAG00000004139	CSTF2	88	90.541	ENSCAFG00000017551	CSTF2	90	76.957	Canis_familiaris
ENSMGAG00000004139	CSTF2	100	82.869	ENSCAFG00020007619	CSTF2	90	76.957	Canis_lupus_dingo
ENSMGAG00000004139	CSTF2	100	82.072	ENSCHIG00000016994	CSTF2	93	68.456	Capra_hircus
ENSMGAG00000004139	CSTF2	100	84.861	ENSTSYG00000006529	CSTF2	93	87.838	Carlito_syrichta
ENSMGAG00000004139	CSTF2	100	84.861	ENSCPOG00000015255	CSTF2	93	89.189	Cavia_porcellus
ENSMGAG00000004139	CSTF2	100	84.064	ENSCCAG00000032975	CSTF2	93	68.885	Cebus_capucinus
ENSMGAG00000004139	CSTF2	100	84.462	ENSCATG00000022835	CSTF2	93	69.295	Cercocebus_atys
ENSMGAG00000004139	CSTF2	100	84.462	ENSCLAG00000001904	CSTF2	85	94.194	Chinchilla_lanigera
ENSMGAG00000004139	CSTF2	100	84.462	ENSCSAG00000010360	CSTF2	93	66.989	Chlorocebus_sabaeus
ENSMGAG00000004139	CSTF2	54	95.522	ENSCHOG00000012803	CSTF2	59	92.754	Choloepus_hoffmanni
ENSMGAG00000004139	CSTF2	99	93.281	ENSCPBG00000014293	CSTF2	93	76.070	Chrysemys_picta_bellii
ENSMGAG00000004139	CSTF2	100	84.462	ENSCANG00000030612	CSTF2	93	69.295	Colobus_angolensis_palliatus
ENSMGAG00000004139	CSTF2	99	67.219	ENSCGRG00001023023	Cstf2	93	67.550	Cricetulus_griseus_chok1gshd
ENSMGAG00000004139	CSTF2	100	65.577	ENSCGRG00000003897	Cstf2	93	66.391	Cricetulus_griseus_crigri
ENSMGAG00000004139	CSTF2	100	60.465	ENSCVAG00000005731	cstf2	86	68.293	Cyprinodon_variegatus
ENSMGAG00000004139	CSTF2	63	100.000	ENSDARG00000090788	cstf2	83	100.000	Danio_rerio
ENSMGAG00000004139	CSTF2	99	67.559	ENSDORG00000007195	Cstf2	85	94.805	Dipodomys_ordii
ENSMGAG00000004139	CSTF2	77	89.189	ENSETEG00000004931	CSTF2	62	89.189	Echinops_telfairi
ENSMGAG00000004139	CSTF2	100	83.665	ENSEASG00005001216	CSTF2	93	67.532	Equus_asinus_asinus
ENSMGAG00000004139	CSTF2	100	83.665	ENSECAG00000009325	CSTF2	93	69.799	Equus_caballus
ENSMGAG00000004139	CSTF2	100	82.869	ENSFCAG00000007000	CSTF2	93	68.552	Felis_catus
ENSMGAG00000004139	CSTF2	100	95.720	ENSFALG00000003859	CSTF2	86	88.406	Ficedula_albicollis
ENSMGAG00000004139	CSTF2	100	84.861	ENSFDAG00000002416	CSTF2	93	89.189	Fukomys_damarensis
ENSMGAG00000004139	CSTF2	100	58.750	ENSFHEG00000017065	cstf2	79	87.805	Fundulus_heteroclitus
ENSMGAG00000004139	CSTF2	100	98.372	ENSGALG00000006760	CSTF2	91	98.780	Gallus_gallus
ENSMGAG00000004139	CSTF2	50	79.535	ENSGAFG00000020027	cstf2	90	71.951	Gambusia_affinis
ENSMGAG00000004139	CSTF2	87	86.538	ENSGACG00000017326	cstf2	91	86.538	Gasterosteus_aculeatus
ENSMGAG00000004139	CSTF2	99	76.461	ENSGAGG00000006037	CSTF2	93	78.211	Gopherus_agassizii
ENSMGAG00000004139	CSTF2	100	85.259	ENSGGOG00000022267	CSTF2	93	69.631	Gorilla_gorilla
ENSMGAG00000004139	CSTF2	76	77.143	ENSHBUG00000016183	cstf2	81	77.143	Haplochromis_burtoni
ENSMGAG00000004139	CSTF2	100	56.546	ENSHGLG00000013455	-	92	56.357	Heterocephalus_glaber_female
ENSMGAG00000004139	CSTF2	88	89.189	ENSHGLG00000000659	-	93	89.189	Heterocephalus_glaber_female
ENSMGAG00000004139	CSTF2	100	56.546	ENSHGLG00100015391	-	92	56.357	Heterocephalus_glaber_male
ENSMGAG00000004139	CSTF2	88	89.189	ENSHGLG00100001130	-	93	89.189	Heterocephalus_glaber_male
ENSMGAG00000004139	CSTF2	84	85.455	ENSHCOG00000005157	cstf2	87	85.965	Hippocampus_comes
ENSMGAG00000004139	CSTF2	100	60.086	ENSIPUG00000017839	cstf2	85	85.714	Ictalurus_punctatus
ENSMGAG00000004139	CSTF2	89	80.952	ENSSTOG00000023445	CSTF2	85	94.194	Ictidomys_tridecemlineatus
ENSMGAG00000004139	CSTF2	99	69.295	ENSJJAG00000020507	Cstf2	85	94.194	Jaculus_jaculus
ENSMGAG00000004139	CSTF2	61	100.000	ENSLBEG00000028720	cstf2	78	100.000	Labrus_bergylta
ENSMGAG00000004139	CSTF2	99	78.261	ENSLACG00000015927	CSTF2	93	58.399	Latimeria_chalumnae
ENSMGAG00000004139	CSTF2	87	83.077	ENSLOCG00000015300	cstf2	86	83.077	Lepisosteus_oculatus
ENSMGAG00000004139	CSTF2	89	98.333	ENSLAFG00000000474	CSTF2	93	98.333	Loxodonta_africana
ENSMGAG00000004139	CSTF2	100	84.462	ENSMFAG00000043888	CSTF2	93	69.295	Macaca_fascicularis
ENSMGAG00000004139	CSTF2	99	69.218	ENSMMUG00000013008	CSTF2	94	69.218	Macaca_mulatta
ENSMGAG00000004139	CSTF2	100	84.462	ENSMNEG00000041824	CSTF2	93	69.218	Macaca_nemestrina
ENSMGAG00000004139	CSTF2	100	84.462	ENSMLEG00000036870	CSTF2	93	69.295	Mandrillus_leucophaeus
ENSMGAG00000004139	CSTF2	99	58.599	ENSMAMG00000020364	cstf2	92	69.620	Mastacembelus_armatus
ENSMGAG00000004139	CSTF2	76	77.143	ENSMZEG00005007200	cstf2	84	77.143	Maylandia_zebra
ENSMGAG00000004139	CSTF2	99	67.384	ENSMAUG00000000965	Cstf2	93	68.543	Mesocricetus_auratus
ENSMGAG00000004139	CSTF2	100	86.454	ENSMICG00000014121	CSTF2	93	70.134	Microcebus_murinus
ENSMGAG00000004139	CSTF2	88	90.541	ENSMOCG00000008081	Cstf2	93	90.541	Microtus_ochrogaster
ENSMGAG00000004139	CSTF2	68	89.474	ENSMMOG00000000538	cstf2	81	90.000	Mola_mola
ENSMGAG00000004139	CSTF2	100	84.064	ENSMODG00000011785	CSTF2	93	70.081	Monodelphis_domestica
ENSMGAG00000004139	CSTF2	99	83.665	MGP_CAROLIEiJ_G0033383	Cstf2	86	93.038	Mus_caroli
ENSMGAG00000004139	CSTF2	99	67.384	ENSMUSG00000031256	Cstf2	86	93.038	Mus_musculus
ENSMGAG00000004139	CSTF2	99	83.665	MGP_PahariEiJ_G0031923	Cstf2	92	75.107	Mus_pahari
ENSMGAG00000004139	CSTF2	99	83.267	MGP_SPRETEiJ_G0034548	Cstf2	86	93.038	Mus_spretus
ENSMGAG00000004139	CSTF2	100	83.267	ENSMPUG00000002339	CSTF2	93	63.988	Mustela_putorius_furo
ENSMGAG00000004139	CSTF2	100	82.470	ENSMLUG00000004598	CSTF2	92	62.940	Myotis_lucifugus
ENSMGAG00000004139	CSTF2	99	69.231	ENSNGAG00000021985	Cstf2	93	70.401	Nannospalax_galili
ENSMGAG00000004139	CSTF2	67	91.176	ENSNBRG00000021694	cstf2	88	91.667	Neolamprologus_brichardi
ENSMGAG00000004139	CSTF2	100	84.861	ENSNLEG00000007510	CSTF2	93	69.463	Nomascus_leucogenys
ENSMGAG00000004139	CSTF2	86	90.000	ENSMEUG00000014025	-	99	90.000	Notamacropus_eugenii
ENSMGAG00000004139	CSTF2	100	62.214	ENSMEUG00000007875	-	93	66.047	Notamacropus_eugenii
ENSMGAG00000004139	CSTF2	85	98.214	ENSMEUG00000011186	-	92	91.429	Notamacropus_eugenii
ENSMGAG00000004139	CSTF2	83	88.571	ENSOPRG00000003106	CSTF2	75	100.000	Ochotona_princeps
ENSMGAG00000004139	CSTF2	88	89.189	ENSODEG00000002059	CSTF2	93	89.189	Octodon_degus
ENSMGAG00000004139	CSTF2	100	50.995	ENSONIG00000002631	cstf2	94	51.835	Oreochromis_niloticus
ENSMGAG00000004139	CSTF2	99	69.516	ENSOANG00000004208	CSTF2	96	72.419	Ornithorhynchus_anatinus
ENSMGAG00000004139	CSTF2	88	87.838	ENSOCUG00000010468	CSTF2	93	87.838	Oryctolagus_cuniculus
ENSMGAG00000004139	CSTF2	73	85.714	ENSORLG00000001380	cstf2	84	70.000	Oryzias_latipes
ENSMGAG00000004139	CSTF2	73	85.714	ENSORLG00020021917	cstf2	84	70.000	Oryzias_latipes_hni
ENSMGAG00000004139	CSTF2	73	85.714	ENSORLG00015011996	cstf2	84	70.000	Oryzias_latipes_hsok
ENSMGAG00000004139	CSTF2	99	61.087	ENSOMEG00000015507	cstf2	90	58.879	Oryzias_melastigma
ENSMGAG00000004139	CSTF2	100	84.462	ENSOGAG00000011192	CSTF2	93	63.553	Otolemur_garnettii
ENSMGAG00000004139	CSTF2	100	82.072	ENSOARG00000001022	CSTF2	93	68.456	Ovis_aries
ENSMGAG00000004139	CSTF2	100	85.259	ENSPPAG00000031804	CSTF2	93	69.631	Pan_paniscus
ENSMGAG00000004139	CSTF2	100	82.869	ENSPPRG00000022492	CSTF2	93	68.552	Panthera_pardus
ENSMGAG00000004139	CSTF2	100	82.072	ENSPTIG00000009922	CSTF2	93	68.220	Panthera_tigris_altaica
ENSMGAG00000004139	CSTF2	100	85.259	ENSPTRG00000022090	CSTF2	93	69.631	Pan_troglodytes
ENSMGAG00000004139	CSTF2	100	84.462	ENSPANG00000002303	CSTF2	93	69.295	Papio_anubis
ENSMGAG00000004139	CSTF2	85	91.228	ENSPKIG00000005033	cstf2	83	90.566	Paramormyrops_kingsleyae
ENSMGAG00000004139	CSTF2	85	82.759	ENSPMGG00000006534	cstf2	89	82.759	Periophthalmus_magnuspinnatus
ENSMGAG00000004139	CSTF2	99	66.722	ENSPEMG00000019415	Cstf2	93	68.046	Peromyscus_maniculatus_bairdii
ENSMGAG00000004139	CSTF2	88	98.214	ENSPCIG00000002989	CSTF2	84	91.429	Phascolarctos_cinereus
ENSMGAG00000004139	CSTF2	78	70.732	ENSPLAG00000011176	cstf2	86	70.732	Poecilia_latipinna
ENSMGAG00000004139	CSTF2	50	80.000	ENSPMEG00000017743	cstf2	86	70.732	Poecilia_mexicana
ENSMGAG00000004139	CSTF2	86	81.429	ENSPREG00000011481	cstf2	91	70.732	Poecilia_reticulata
ENSMGAG00000004139	CSTF2	100	84.861	ENSPPYG00000020541	CSTF2	93	67.150	Pongo_abelii
ENSMGAG00000004139	CSTF2	100	84.861	ENSPCOG00000027744	CSTF2	80	78.242	Propithecus_coquereli
ENSMGAG00000004139	CSTF2	78	89.189	ENSPVAG00000008342	CSTF2	85	62.991	Pteropus_vampyrus
ENSMGAG00000004139	CSTF2	100	60.560	ENSPNAG00000018887	cstf2	85	86.000	Pygocentrus_nattereri
ENSMGAG00000004139	CSTF2	99	67.446	ENSRNOG00000048025	Cstf2	92	72.199	Rattus_norvegicus
ENSMGAG00000004139	CSTF2	87	89.189	ENSRBIG00000030745	CSTF2	92	89.189	Rhinopithecus_bieti
ENSMGAG00000004139	CSTF2	100	84.462	ENSRROG00000045042	CSTF2	93	69.295	Rhinopithecus_roxellana
ENSMGAG00000004139	CSTF2	100	84.064	ENSSBOG00000021649	CSTF2	93	68.719	Saimiri_boliviensis_boliviensis
ENSMGAG00000004139	CSTF2	100	84.861	ENSSHAG00000003681	CSTF2	88	91.429	Sarcophilus_harrisii
ENSMGAG00000004139	CSTF2	74	85.484	ENSSFOG00015006348	cstf2	88	75.949	Scleropages_formosus
ENSMGAG00000004139	CSTF2	83	86.792	ENSSMAG00000013463	cstf2	89	69.620	Scophthalmus_maximus
ENSMGAG00000004139	CSTF2	100	82.517	ENSSPUG00000005288	-	91	92.405	Sphenodon_punctatus
ENSMGAG00000004139	CSTF2	100	82.470	ENSSSCG00000012486	CSTF2	91	89.189	Sus_scrofa
ENSMGAG00000004139	CSTF2	90	98.780	ENSTGUG00000002253	CSTF2	93	98.780	Taeniopygia_guttata
ENSMGAG00000004139	CSTF2	100	57.026	ENSTNIG00000016860	cstf2	88	70.370	Tetraodon_nigroviridis
ENSMGAG00000004139	CSTF2	99	69.463	ENSTTRG00000013556	CSTF2	93	69.463	Tursiops_truncatus
ENSMGAG00000004139	CSTF2	100	83.665	ENSUAMG00000026605	CSTF2	93	69.616	Ursus_americanus
ENSMGAG00000004139	CSTF2	99	83.267	ENSUMAG00000012417	CSTF2	90	90.541	Ursus_maritimus
ENSMGAG00000004139	CSTF2	79	80.303	ENSVPAG00000006466	CSTF2	64	81.788	Vicugna_pacos
ENSMGAG00000004139	CSTF2	88	90.541	ENSVVUG00000004717	CSTF2	93	69.463	Vulpes_vulpes
ENSMGAG00000004139	CSTF2	100	76.259	ENSXETG00000009642	cstf2	92	78.409	Xenopus_tropicalis
ENSMGAG00000004139	CSTF2	63	96.296	ENSXCOG00000016436	cstf2	79	96.296	Xiphophorus_couchianus
ENSMGAG00000004139	CSTF2	85	81.159	ENSXMAG00000013524	cstf2	90	69.512	Xiphophorus_maculatus