EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000004235 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4
Alias: CPSF30|NAR
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 5037 bases
Position: chr16:4660981-4666017
Accession: 2327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000004009	zf-CCCH	PF00642.24	3.9e-21	1	2
ENSMGAP00000004009	zf-CCCH	PF00642.24	3.9e-21	2	2
ENSMGAP00000004009	zf-CCHC	PF00098.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000004719	CPSF4-201	1706	-	ENSMGAP00000004009	209 (aa)	-	G1MYH9

Gene Model

Click here to download ENSMGAG00000004235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000004235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000004235	CPSF4	100	94.762	ENSG00000160917	CPSF4	100	99.107	Homo_sapiens
ENSMGAG00000004235	CPSF4	74	67.232	ENSAPOG00000004921	cpsf4	100	67.232	Acanthochromis_polyacanthus
ENSMGAG00000004235	CPSF4	100	82.979	ENSAMEG00000006252	CPSF4	87	84.255	Ailuropoda_melanoleuca
ENSMGAG00000004235	CPSF4	100	85.646	ENSACIG00000009248	cpsf4	86	85.646	Amphilophus_citrinellus
ENSMGAG00000004235	CPSF4	100	79.221	ENSAOCG00000019616	cpsf4	87	79.221	Amphiprion_ocellaris
ENSMGAG00000004235	CPSF4	100	79.221	ENSAPEG00000011679	cpsf4	87	79.221	Amphiprion_percula
ENSMGAG00000004235	CPSF4	100	84.038	ENSATEG00000007010	cpsf4	86	84.038	Anabas_testudineus
ENSMGAG00000004235	CPSF4	100	82.128	ENSACAG00000012941	CPSF4	78	84.681	Anolis_carolinensis
ENSMGAG00000004235	CPSF4	100	83.404	ENSANAG00000021360	CPSF4	87	84.681	Aotus_nancymaae
ENSMGAG00000004235	CPSF4	100	79.426	ENSACLG00000010374	cpsf4	87	77.922	Astatotilapia_calliptera
ENSMGAG00000004235	CPSF4	100	78.390	ENSAMXG00000031647	cpsf4	87	79.237	Astyanax_mexicanus
ENSMGAG00000004235	CPSF4	100	94.737	ENSBTAG00000002090	CPSF4	86	94.737	Bos_taurus
ENSMGAG00000004235	CPSF4	100	83.404	ENSCJAG00000015826	CPSF4	87	84.681	Callithrix_jacchus
ENSMGAG00000004235	CPSF4	100	82.979	ENSCAFG00000015036	CPSF4	87	85.106	Canis_familiaris
ENSMGAG00000004235	CPSF4	92	82.110	ENSCAFG00020014462	CPSF4	83	84.404	Canis_lupus_dingo
ENSMGAG00000004235	CPSF4	100	82.979	ENSCHIG00000014313	CPSF4	87	84.255	Capra_hircus
ENSMGAG00000004235	CPSF4	100	94.762	ENSTSYG00000005712	-	86	94.762	Carlito_syrichta
ENSMGAG00000004235	CPSF4	100	87.678	ENSTSYG00000008195	-	93	87.678	Carlito_syrichta
ENSMGAG00000004235	CPSF4	100	86.256	ENSTSYG00000014604	-	86	86.256	Carlito_syrichta
ENSMGAG00000004235	CPSF4	92	82.110	ENSCAPG00000013881	CPSF4	87	83.486	Cavia_aperea
ENSMGAG00000004235	CPSF4	100	94.286	ENSCPOG00000001783	CPSF4	86	94.286	Cavia_porcellus
ENSMGAG00000004235	CPSF4	100	83.404	ENSCCAG00000028291	CPSF4	87	84.681	Cebus_capucinus
ENSMGAG00000004235	CPSF4	100	89.048	ENSCATG00000038440	CPSF4	85	89.048	Cercocebus_atys
ENSMGAG00000004235	CPSF4	100	82.979	ENSCLAG00000007050	CPSF4	87	84.255	Chinchilla_lanigera
ENSMGAG00000004235	CPSF4	100	83.404	ENSCSAG00000017795	CPSF4	87	84.681	Chlorocebus_sabaeus
ENSMGAG00000004235	CPSF4	63	84.091	ENSCPBG00000010269	-	80	84.091	Chrysemys_picta_bellii
ENSMGAG00000004235	CPSF4	91	85.648	ENSCPBG00000020869	CPSF4	100	85.648	Chrysemys_picta_bellii
ENSMGAG00000004235	CPSF4	96	52.273	ENSCING00000021080	-	84	52.273	Ciona_intestinalis
ENSMGAG00000004235	CPSF4	95	49.799	ENSCSAVG00000011469	-	85	49.799	Ciona_savignyi
ENSMGAG00000004235	CPSF4	100	88.095	ENSCANG00000019384	CPSF4	85	88.095	Colobus_angolensis_palliatus
ENSMGAG00000004235	CPSF4	100	94.286	ENSCGRG00001024184	Cpsf4	86	94.286	Cricetulus_griseus_chok1gshd
ENSMGAG00000004235	CPSF4	100	82.979	ENSCGRG00000013892	Cpsf4	87	84.255	Cricetulus_griseus_crigri
ENSMGAG00000004235	CPSF4	100	77.922	ENSCSEG00000019055	cpsf4	87	77.922	Cynoglossus_semilaevis
ENSMGAG00000004235	CPSF4	100	78.788	ENSCVAG00000016528	cpsf4	87	78.788	Cyprinodon_variegatus
ENSMGAG00000004235	CPSF4	100	74.684	ENSDARG00000020217	cpsf4	87	77.215	Danio_rerio
ENSMGAG00000004235	CPSF4	100	83.404	ENSDNOG00000006344	CPSF4	87	84.681	Dasypus_novemcinctus
ENSMGAG00000004235	CPSF4	91	82.028	ENSDORG00000000742	Cpsf4	100	83.410	Dipodomys_ordii
ENSMGAG00000004235	CPSF4	100	52.830	FBgn0015621	Clp	87	53.585	Drosophila_melanogaster
ENSMGAG00000004235	CPSF4	73	100.000	ENSETEG00000002608	CPSF4	57	100.000	Echinops_telfairi
ENSMGAG00000004235	CPSF4	99	72.857	ENSEBUG00000012552	cpsf4	84	72.857	Eptatretus_burgeri
ENSMGAG00000004235	CPSF4	100	94.286	ENSEASG00005002487	CPSF4	86	94.286	Equus_asinus_asinus
ENSMGAG00000004235	CPSF4	100	82.979	ENSECAG00000007525	CPSF4	87	84.255	Equus_caballus
ENSMGAG00000004235	CPSF4	69	100.000	ENSEEUG00000002158	CPSF4	73	100.000	Erinaceus_europaeus
ENSMGAG00000004235	CPSF4	100	77.311	ENSELUG00000011481	cpsf4	88	77.311	Esox_lucius
ENSMGAG00000004235	CPSF4	100	82.979	ENSFCAG00000015070	CPSF4	87	84.255	Felis_catus
ENSMGAG00000004235	CPSF4	100	98.086	ENSFALG00000013799	CPSF4	86	98.086	Ficedula_albicollis
ENSMGAG00000004235	CPSF4	50	67.857	ENSFALG00000012906	-	73	67.857	Ficedula_albicollis
ENSMGAG00000004235	CPSF4	100	82.979	ENSFDAG00000014092	CPSF4	97	84.255	Fukomys_damarensis
ENSMGAG00000004235	CPSF4	100	77.922	ENSFHEG00000010880	cpsf4	87	77.922	Fundulus_heteroclitus
ENSMGAG00000004235	CPSF4	100	80.357	ENSGMOG00000002330	cpsf4	87	80.357	Gadus_morhua
ENSMGAG00000004235	CPSF4	75	39.888	ENSGALG00000004441	-	92	39.888	Gallus_gallus
ENSMGAG00000004235	CPSF4	100	99.522	ENSGALG00000004714	CPSF4	86	99.522	Gallus_gallus
ENSMGAG00000004235	CPSF4	100	78.261	ENSGAFG00000010580	cpsf4	87	78.261	Gambusia_affinis
ENSMGAG00000004235	CPSF4	100	81.818	ENSGACG00000007792	cpsf4	87	81.818	Gasterosteus_aculeatus
ENSMGAG00000004235	CPSF4	100	85.957	ENSGAGG00000021835	CPSF4	87	85.957	Gopherus_agassizii
ENSMGAG00000004235	CPSF4	71	79.054	ENSGAGG00000020579	-	81	79.054	Gopherus_agassizii
ENSMGAG00000004235	CPSF4	100	83.404	ENSGGOG00000015131	CPSF4	87	84.681	Gorilla_gorilla
ENSMGAG00000004235	CPSF4	100	77.922	ENSHBUG00000013699	cpsf4	87	77.922	Haplochromis_burtoni
ENSMGAG00000004235	CPSF4	100	81.857	ENSHGLG00000017150	CPSF4	87	83.122	Heterocephalus_glaber_female
ENSMGAG00000004235	CPSF4	99	80.508	ENSHGLG00100009215	-	100	81.780	Heterocephalus_glaber_male
ENSMGAG00000004235	CPSF4	100	55.024	ENSHGLG00100017302	-	80	55.024	Heterocephalus_glaber_male
ENSMGAG00000004235	CPSF4	100	77.056	ENSHCOG00000004397	cpsf4	87	77.056	Hippocampus_comes
ENSMGAG00000004235	CPSF4	100	76.371	ENSIPUG00000017147	cpsf4	87	78.481	Ictalurus_punctatus
ENSMGAG00000004235	CPSF4	100	94.737	ENSSTOG00000001688	CPSF4	86	94.737	Ictidomys_tridecemlineatus
ENSMGAG00000004235	CPSF4	100	82.979	ENSJJAG00000019426	Cpsf4	87	84.255	Jaculus_jaculus
ENSMGAG00000004235	CPSF4	100	77.056	ENSKMAG00000015642	cpsf4	87	77.056	Kryptolebias_marmoratus
ENSMGAG00000004235	CPSF4	100	63.981	ENSLACG00000018470	-	86	63.981	Latimeria_chalumnae
ENSMGAG00000004235	CPSF4	100	81.356	ENSLACG00000010938	CPSF4	87	81.356	Latimeria_chalumnae
ENSMGAG00000004235	CPSF4	100	79.574	ENSLOCG00000004814	cpsf4	87	83.404	Lepisosteus_oculatus
ENSMGAG00000004235	CPSF4	100	82.553	ENSLAFG00000000159	CPSF4	100	77.202	Loxodonta_africana
ENSMGAG00000004235	CPSF4	100	88.095	ENSMFAG00000001462	CPSF4	100	94.764	Macaca_fascicularis
ENSMGAG00000004235	CPSF4	100	83.404	ENSMMUG00000019191	CPSF4	87	84.681	Macaca_mulatta
ENSMGAG00000004235	CPSF4	100	88.095	ENSMNEG00000032306	CPSF4	85	88.095	Macaca_nemestrina
ENSMGAG00000004235	CPSF4	100	89.048	ENSMLEG00000034721	CPSF4	85	89.048	Mandrillus_leucophaeus
ENSMGAG00000004235	CPSF4	100	78.970	ENSMAMG00000006244	cpsf4	87	78.970	Mastacembelus_armatus
ENSMGAG00000004235	CPSF4	100	77.922	ENSMZEG00005007515	cpsf4	87	77.922	Maylandia_zebra
ENSMGAG00000004235	CPSF4	100	82.979	ENSMAUG00000021253	Cpsf4	87	84.255	Mesocricetus_auratus
ENSMGAG00000004235	CPSF4	100	82.979	ENSMICG00000017429	CPSF4	87	84.255	Microcebus_murinus
ENSMGAG00000004235	CPSF4	100	82.979	ENSMOCG00000014901	Cpsf4	87	84.255	Microtus_ochrogaster
ENSMGAG00000004235	CPSF4	100	78.879	ENSMMOG00000001813	cpsf4	87	78.879	Mola_mola
ENSMGAG00000004235	CPSF4	100	84.255	ENSMODG00000001367	CPSF4	87	85.957	Monodelphis_domestica
ENSMGAG00000004235	CPSF4	100	78.112	ENSMALG00000012611	cpsf4	87	78.112	Monopterus_albus
ENSMGAG00000004235	CPSF4	100	94.737	MGP_CAROLIEiJ_G0028012	Cpsf4	86	94.737	Mus_caroli
ENSMGAG00000004235	CPSF4	100	94.737	ENSMUSG00000029625	Cpsf4	86	94.737	Mus_musculus
ENSMGAG00000004235	CPSF4	100	94.737	MGP_PahariEiJ_G0024581	Cpsf4	86	94.737	Mus_pahari
ENSMGAG00000004235	CPSF4	100	94.737	MGP_SPRETEiJ_G0029013	Cpsf4	86	94.737	Mus_spretus
ENSMGAG00000004235	CPSF4	100	82.979	ENSMPUG00000016508	CPSF4	87	84.255	Mustela_putorius_furo
ENSMGAG00000004235	CPSF4	100	95.215	ENSMLUG00000010980	CPSF4	100	95.215	Myotis_lucifugus
ENSMGAG00000004235	CPSF4	100	83.404	ENSNGAG00000001567	Cpsf4	87	84.681	Nannospalax_galili
ENSMGAG00000004235	CPSF4	100	77.922	ENSNBRG00000003943	cpsf4	94	77.922	Neolamprologus_brichardi
ENSMGAG00000004235	CPSF4	100	94.762	ENSNLEG00000011074	CPSF4	86	94.762	Nomascus_leucogenys
ENSMGAG00000004235	CPSF4	100	84.255	ENSMEUG00000006955	CPSF4	87	85.957	Notamacropus_eugenii
ENSMGAG00000004235	CPSF4	100	82.979	ENSOPRG00000013663	CPSF4	87	84.255	Ochotona_princeps
ENSMGAG00000004235	CPSF4	100	66.960	ENSODEG00000009779	-	87	66.960	Octodon_degus
ENSMGAG00000004235	CPSF4	92	85.567	ENSODEG00000018283	-	78	85.567	Octodon_degus
ENSMGAG00000004235	CPSF4	100	82.979	ENSODEG00000011181	-	87	84.255	Octodon_degus
ENSMGAG00000004235	CPSF4	100	77.922	ENSONIG00000008495	cpsf4	87	77.922	Oreochromis_niloticus
ENSMGAG00000004235	CPSF4	100	85.897	ENSOANG00000007729	CPSF4	100	85.897	Ornithorhynchus_anatinus
ENSMGAG00000004235	CPSF4	92	53.540	ENSOANG00000009568	-	83	53.540	Ornithorhynchus_anatinus
ENSMGAG00000004235	CPSF4	100	82.553	ENSOCUG00000002437	CPSF4	61	83.830	Oryctolagus_cuniculus
ENSMGAG00000004235	CPSF4	100	77.922	ENSORLG00000022798	cpsf4	87	77.922	Oryzias_latipes
ENSMGAG00000004235	CPSF4	100	77.922	ENSORLG00020008548	cpsf4	87	77.922	Oryzias_latipes_hni
ENSMGAG00000004235	CPSF4	100	77.922	ENSORLG00015019575	cpsf4	87	77.922	Oryzias_latipes_hsok
ENSMGAG00000004235	CPSF4	100	77.056	ENSOMEG00000005176	cpsf4	87	77.056	Oryzias_melastigma
ENSMGAG00000004235	CPSF4	100	82.979	ENSOGAG00000010884	CPSF4	87	84.255	Otolemur_garnettii
ENSMGAG00000004235	CPSF4	100	73.222	ENSOARG00000018668	CPSF4	88	73.222	Ovis_aries
ENSMGAG00000004235	CPSF4	100	83.404	ENSPPAG00000043355	CPSF4	87	84.681	Pan_paniscus
ENSMGAG00000004235	CPSF4	100	82.979	ENSPPRG00000003134	CPSF4	87	84.255	Panthera_pardus
ENSMGAG00000004235	CPSF4	100	82.979	ENSPTIG00000005604	CPSF4	87	84.255	Panthera_tigris_altaica
ENSMGAG00000004235	CPSF4	100	83.404	ENSPTRG00000019453	CPSF4	87	84.681	Pan_troglodytes
ENSMGAG00000004235	CPSF4	100	88.095	ENSPANG00000023123	CPSF4	85	88.095	Papio_anubis
ENSMGAG00000004235	CPSF4	100	79.583	ENSPKIG00000014278	cpsf4	88	79.583	Paramormyrops_kingsleyae
ENSMGAG00000004235	CPSF4	91	85.185	ENSPSIG00000011229	CPSF4	100	85.185	Pelodiscus_sinensis
ENSMGAG00000004235	CPSF4	92	65.285	ENSPSIG00000018198	-	100	65.285	Pelodiscus_sinensis
ENSMGAG00000004235	CPSF4	92	85.417	ENSPMGG00000017735	cpsf4	81	85.417	Periophthalmus_magnuspinnatus
ENSMGAG00000004235	CPSF4	100	82.979	ENSPEMG00000004508	Cpsf4	87	84.255	Peromyscus_maniculatus_bairdii
ENSMGAG00000004235	CPSF4	100	84.255	ENSPCIG00000024776	CPSF4	87	85.957	Phascolarctos_cinereus
ENSMGAG00000004235	CPSF4	100	78.261	ENSPFOG00000014912	cpsf4	87	78.261	Poecilia_formosa
ENSMGAG00000004235	CPSF4	100	77.830	ENSPLAG00000009599	cpsf4	86	77.830	Poecilia_latipinna
ENSMGAG00000004235	CPSF4	100	78.261	ENSPMEG00000009790	cpsf4	87	78.261	Poecilia_mexicana
ENSMGAG00000004235	CPSF4	100	77.391	ENSPREG00000018166	cpsf4	87	77.391	Poecilia_reticulata
ENSMGAG00000004235	CPSF4	99	83.333	ENSPPYG00000017378	CPSF4	100	84.615	Pongo_abelii
ENSMGAG00000004235	CPSF4	100	82.128	ENSPCAG00000001892	CPSF4	87	83.404	Procavia_capensis
ENSMGAG00000004235	CPSF4	100	82.979	ENSPCOG00000012771	CPSF4	87	84.255	Propithecus_coquereli
ENSMGAG00000004235	CPSF4	91	82.028	ENSPVAG00000007531	CPSF4	81	83.410	Pteropus_vampyrus
ENSMGAG00000004235	CPSF4	100	77.922	ENSPNYG00000018559	cpsf4	87	77.922	Pundamilia_nyererei
ENSMGAG00000004235	CPSF4	100	78.390	ENSPNAG00000003736	cpsf4	87	80.085	Pygocentrus_nattereri
ENSMGAG00000004235	CPSF4	100	94.737	ENSRNOG00000000985	Cpsf4	86	94.737	Rattus_norvegicus
ENSMGAG00000004235	CPSF4	99	85.043	ENSRBIG00000033886	CPSF4	100	85.043	Rhinopithecus_bieti
ENSMGAG00000004235	CPSF4	100	94.762	ENSRROG00000040431	CPSF4	86	94.762	Rhinopithecus_roxellana
ENSMGAG00000004235	CPSF4	91	94.764	ENSSBOG00000020493	CPSF4	100	94.764	Saimiri_boliviensis_boliviensis
ENSMGAG00000004235	CPSF4	100	84.255	ENSSHAG00000011533	CPSF4	87	85.957	Sarcophilus_harrisii
ENSMGAG00000004235	CPSF4	100	81.405	ENSSFOG00015007883	cpsf4	88	81.405	Scleropages_formosus
ENSMGAG00000004235	CPSF4	100	85.915	ENSSMAG00000006374	cpsf4	86	85.915	Scophthalmus_maximus
ENSMGAG00000004235	CPSF4	100	78.017	ENSSDUG00000018887	cpsf4	87	78.017	Seriola_dumerili
ENSMGAG00000004235	CPSF4	100	78.017	ENSSLDG00000019078	cpsf4	87	78.017	Seriola_lalandi_dorsalis
ENSMGAG00000004235	CPSF4	99	83.333	ENSSARG00000012416	CPSF4	100	84.615	Sorex_araneus
ENSMGAG00000004235	CPSF4	95	63.366	ENSSPUG00000014803	-	82	63.366	Sphenodon_punctatus
ENSMGAG00000004235	CPSF4	100	86.383	ENSSPUG00000003549	CPSF4	87	86.383	Sphenodon_punctatus
ENSMGAG00000004235	CPSF4	100	86.603	ENSSPAG00000006174	cpsf4	86	86.603	Stegastes_partitus
ENSMGAG00000004235	CPSF4	100	94.286	ENSSSCG00000026896	CPSF4	86	94.286	Sus_scrofa
ENSMGAG00000004235	CPSF4	100	96.682	ENSTGUG00000007552	CPSF4	86	96.682	Taeniopygia_guttata
ENSMGAG00000004235	CPSF4	100	76.419	ENSTRUG00000024220	cpsf4	87	76.419	Takifugu_rubripes
ENSMGAG00000004235	CPSF4	100	76.856	ENSTNIG00000006265	cpsf4	87	76.856	Tetraodon_nigroviridis
ENSMGAG00000004235	CPSF4	99	74.786	ENSTBEG00000011406	CPSF4	100	75.214	Tupaia_belangeri
ENSMGAG00000004235	CPSF4	100	72.766	ENSTTRG00000003007	CPSF4	87	72.766	Tursiops_truncatus
ENSMGAG00000004235	CPSF4	92	91.667	ENSUAMG00000008051	CPSF4	72	94.118	Ursus_americanus
ENSMGAG00000004235	CPSF4	100	94.737	ENSUMAG00000009474	CPSF4	86	94.737	Ursus_maritimus
ENSMGAG00000004235	CPSF4	100	94.286	ENSVVUG00000008824	CPSF4	86	93.810	Vulpes_vulpes
ENSMGAG00000004235	CPSF4	99	61.111	ENSXETG00000004641	cpsf4l	86	61.111	Xenopus_tropicalis
ENSMGAG00000004235	CPSF4	100	77.959	ENSXETG00000009892	cpsf4	88	80.408	Xenopus_tropicalis
ENSMGAG00000004235	CPSF4	100	77.826	ENSXCOG00000016040	cpsf4	87	77.826	Xiphophorus_couchianus
ENSMGAG00000004235	CPSF4	100	78.261	ENSXMAG00000024670	cpsf4	87	78.261	Xiphophorus_maculatus