EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000004573 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 46168 bases
Position: chr1:8779336-8825503
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000004417	Upf2	PF04050.14	2e-33	1	1
ENSMGAP00000004417	MIF4G	PF02854.19	1.1e-75	1	3
ENSMGAP00000004417	MIF4G	PF02854.19	1.1e-75	2	3
ENSMGAP00000004417	MIF4G	PF02854.19	1.1e-75	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000005134	UPF2-201	3798	-	ENSMGAP00000004417	1266 (aa)	-	G1MZF5

Gene Model

Click here to download ENSMGAG00000004573's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03013	RNA transport	KEGG
mgp03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000004573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000004573	UPF2	99	92.683	ENSG00000151461	UPF2	99	92.447	Homo_sapiens
ENSMGAG00000004573	UPF2	99	79.373	ENSAPOG00000015837	UPF2	99	78.695	Acanthochromis_polyacanthus
ENSMGAG00000004573	UPF2	99	93.470	ENSAMEG00000004586	UPF2	99	93.470	Ailuropoda_melanoleuca
ENSMGAG00000004573	UPF2	99	83.373	ENSACIG00000018078	UPF2	99	83.608	Amphilophus_citrinellus
ENSMGAG00000004573	UPF2	99	83.412	ENSAOCG00000016766	UPF2	99	83.634	Amphiprion_ocellaris
ENSMGAG00000004573	UPF2	99	83.438	ENSAPEG00000019084	UPF2	99	83.712	Amphiprion_percula
ENSMGAG00000004573	UPF2	99	83.138	ENSATEG00000021677	UPF2	99	83.294	Anabas_testudineus
ENSMGAG00000004573	UPF2	99	90.259	ENSAPLG00000010287	UPF2	90	93.745	Anas_platyrhynchos
ENSMGAG00000004573	UPF2	99	92.362	ENSACAG00000009259	UPF2	99	92.362	Anolis_carolinensis
ENSMGAG00000004573	UPF2	99	83.636	ENSANAG00000028451	UPF2	99	83.649	Aotus_nancymaae
ENSMGAG00000004573	UPF2	99	82.275	ENSACLG00000012696	UPF2	99	83.947	Astatotilapia_calliptera
ENSMGAG00000004573	UPF2	99	82.864	ENSAMXG00000013700	UPF2	99	82.759	Astyanax_mexicanus
ENSMGAG00000004573	UPF2	99	93.234	ENSBTAG00000000288	UPF2	99	98.889	Bos_taurus
ENSMGAG00000004573	UPF2	99	92.132	ENSCJAG00000020685	UPF2	99	92.132	Callithrix_jacchus
ENSMGAG00000004573	UPF2	99	93.627	ENSCAFG00000004839	UPF2	99	93.627	Canis_familiaris
ENSMGAG00000004573	UPF2	99	91.489	ENSCAFG00020005882	UPF2	98	92.885	Canis_lupus_dingo
ENSMGAG00000004573	UPF2	99	93.381	ENSCHIG00000020359	UPF2	99	93.381	Capra_hircus
ENSMGAG00000004573	UPF2	99	92.526	ENSTSYG00000000935	UPF2	97	97.143	Carlito_syrichta
ENSMGAG00000004573	UPF2	91	83.305	ENSCAPG00000016658	UPF2	94	83.003	Cavia_aperea
ENSMGAG00000004573	UPF2	99	89.778	ENSCPOG00000008809	UPF2	99	90.571	Cavia_porcellus
ENSMGAG00000004573	UPF2	99	85.208	ENSCCAG00000035991	UPF2	99	86.625	Cebus_capucinus
ENSMGAG00000004573	UPF2	99	92.846	ENSCATG00000032679	UPF2	99	92.846	Cercocebus_atys
ENSMGAG00000004573	UPF2	99	91.660	ENSCLAG00000011434	UPF2	99	92.447	Chinchilla_lanigera
ENSMGAG00000004573	UPF2	99	92.846	ENSCSAG00000013372	UPF2	99	92.846	Chlorocebus_sabaeus
ENSMGAG00000004573	UPF2	88	96.214	ENSCHOG00000000422	UPF2	89	96.214	Choloepus_hoffmanni
ENSMGAG00000004573	UPF2	99	92.829	ENSCPBG00000027823	UPF2	99	93.381	Chrysemys_picta_bellii
ENSMGAG00000004573	UPF2	78	49.355	ENSCSAVG00000007772	-	79	50.193	Ciona_savignyi
ENSMGAG00000004573	UPF2	99	86.875	ENSCANG00000040396	UPF2	99	87.490	Colobus_angolensis_palliatus
ENSMGAG00000004573	UPF2	99	93.386	ENSCGRG00001019347	Upf2	99	92.913	Cricetulus_griseus_chok1gshd
ENSMGAG00000004573	UPF2	99	93.386	ENSCGRG00000017993	Upf2	99	92.913	Cricetulus_griseus_crigri
ENSMGAG00000004573	UPF2	91	82.189	ENSCSEG00000003520	UPF2	99	79.256	Cynoglossus_semilaevis
ENSMGAG00000004573	UPF2	99	82.900	ENSCVAG00000006167	UPF2	99	82.859	Cyprinodon_variegatus
ENSMGAG00000004573	UPF2	99	93.155	ENSDNOG00000018160	UPF2	99	93.155	Dasypus_novemcinctus
ENSMGAG00000004573	UPF2	99	92.290	ENSDORG00000002478	Upf2	99	91.817	Dipodomys_ordii
ENSMGAG00000004573	UPF2	89	35.912	FBgn0029992	Upf2	73	39.651	Drosophila_melanogaster
ENSMGAG00000004573	UPF2	73	98.529	ENSETEG00000011583	-	66	98.529	Echinops_telfairi
ENSMGAG00000004573	UPF2	68	69.715	ENSEBUG00000012448	-	87	72.973	Eptatretus_burgeri
ENSMGAG00000004573	UPF2	99	91.654	ENSEASG00005019274	UPF2	99	95.046	Equus_asinus_asinus
ENSMGAG00000004573	UPF2	99	91.969	ENSECAG00000017022	UPF2	99	92.520	Equus_caballus
ENSMGAG00000004573	UPF2	78	91.026	ENSEEUG00000007819	UPF2	77	91.026	Erinaceus_europaeus
ENSMGAG00000004573	UPF2	100	83.137	ENSELUG00000012014	UPF2	100	83.294	Esox_lucius
ENSMGAG00000004573	UPF2	99	96.111	ENSFCAG00000005785	UPF2	99	93.627	Felis_catus
ENSMGAG00000004573	UPF2	99	96.302	ENSFALG00000001889	UPF2	98	96.302	Ficedula_albicollis
ENSMGAG00000004573	UPF2	99	90.873	ENSFDAG00000014348	UPF2	99	91.345	Fukomys_damarensis
ENSMGAG00000004573	UPF2	99	83.136	ENSFHEG00000009826	UPF2	99	83.017	Fundulus_heteroclitus
ENSMGAG00000004573	UPF2	91	84.201	ENSGMOG00000005557	UPF2	99	81.113	Gadus_morhua
ENSMGAG00000004573	UPF2	99	98.505	ENSGALG00000033772	UPF2	99	98.505	Gallus_gallus
ENSMGAG00000004573	UPF2	99	82.344	ENSGAFG00000020867	UPF2	99	82.316	Gambusia_affinis
ENSMGAG00000004573	UPF2	90	84.788	ENSGACG00000001080	UPF2	99	82.224	Gasterosteus_aculeatus
ENSMGAG00000004573	UPF2	99	94.099	ENSGAGG00000002700	UPF2	99	94.099	Gopherus_agassizii
ENSMGAG00000004573	UPF2	99	92.683	ENSGGOG00000001479	UPF2	99	92.447	Gorilla_gorilla
ENSMGAG00000004573	UPF2	99	82.275	ENSHBUG00000004249	UPF2	99	84.000	Haplochromis_burtoni
ENSMGAG00000004573	UPF2	99	81.353	ENSHGLG00000003822	-	99	80.803	Heterocephalus_glaber_female
ENSMGAG00000004573	UPF2	99	91.424	ENSHGLG00000015176	-	99	92.054	Heterocephalus_glaber_female
ENSMGAG00000004573	UPF2	87	93.890	ENSHGLG00100010036	UPF2	93	89.906	Heterocephalus_glaber_male
ENSMGAG00000004573	UPF2	99	80.874	ENSHCOG00000004025	UPF2	99	81.109	Hippocampus_comes
ENSMGAG00000004573	UPF2	99	82.017	ENSIPUG00000015524	UPF2	99	81.142	Ictalurus_punctatus
ENSMGAG00000004573	UPF2	99	92.762	ENSSTOG00000013075	UPF2	99	92.290	Ictidomys_tridecemlineatus
ENSMGAG00000004573	UPF2	99	91.581	ENSJJAG00000004913	Upf2	99	90.795	Jaculus_jaculus
ENSMGAG00000004573	UPF2	91	85.299	ENSKMAG00000001071	UPF2	99	82.585	Kryptolebias_marmoratus
ENSMGAG00000004573	UPF2	71	85.762	ENSLBEG00000000728	-	93	82.823	Labrus_bergylta
ENSMGAG00000004573	UPF2	91	85.861	ENSLBEG00000016394	-	99	83.503	Labrus_bergylta
ENSMGAG00000004573	UPF2	99	80.157	ENSLACG00000015945	UPF2	99	80.078	Latimeria_chalumnae
ENSMGAG00000004573	UPF2	99	86.245	ENSLOCG00000015698	UPF2	99	86.719	Lepisosteus_oculatus
ENSMGAG00000004573	UPF2	99	92.846	ENSMFAG00000043865	UPF2	99	92.846	Macaca_fascicularis
ENSMGAG00000004573	UPF2	99	92.846	ENSMMUG00000008241	UPF2	99	92.846	Macaca_mulatta
ENSMGAG00000004573	UPF2	80	91.910	ENSMNEG00000008062	UPF2	99	92.172	Macaca_nemestrina
ENSMGAG00000004573	UPF2	95	96.135	ENSMLEG00000036120	UPF2	99	96.368	Mandrillus_leucophaeus
ENSMGAG00000004573	UPF2	99	83.281	ENSMAMG00000018276	UPF2	99	83.216	Mastacembelus_armatus
ENSMGAG00000004573	UPF2	99	82.224	ENSMZEG00005021595	UPF2	99	83.947	Maylandia_zebra
ENSMGAG00000004573	UPF2	99	91.102	ENSMAUG00000016512	Upf2	99	90.630	Mesocricetus_auratus
ENSMGAG00000004573	UPF2	95	96.923	ENSMICG00000001716	UPF2	99	96.907	Microcebus_murinus
ENSMGAG00000004573	UPF2	99	91.496	ENSMOCG00000008263	Upf2	99	92.205	Microtus_ochrogaster
ENSMGAG00000004573	UPF2	90	83.755	ENSMMOG00000006528	UPF2	99	78.852	Mola_mola
ENSMGAG00000004573	UPF2	99	93.780	ENSMODG00000016794	UPF2	99	93.780	Monodelphis_domestica
ENSMGAG00000004573	UPF2	99	83.281	ENSMALG00000002663	UPF2	99	83.569	Monopterus_albus
ENSMGAG00000004573	UPF2	99	92.520	MGP_CAROLIEiJ_G0023157	Upf2	99	93.702	Mus_caroli
ENSMGAG00000004573	UPF2	99	93.071	ENSMUSG00000043241	Upf2	99	95.992	Mus_musculus
ENSMGAG00000004573	UPF2	99	92.756	MGP_PahariEiJ_G0019217	Upf2	99	95.802	Mus_pahari
ENSMGAG00000004573	UPF2	99	93.307	MGP_SPRETEiJ_G0024075	Upf2	99	95.992	Mus_spretus
ENSMGAG00000004573	UPF2	99	93.470	ENSMPUG00000001064	UPF2	99	93.470	Mustela_putorius_furo
ENSMGAG00000004573	UPF2	99	92.930	ENSMLUG00000000228	UPF2	99	92.852	Myotis_lucifugus
ENSMGAG00000004573	UPF2	99	82.224	ENSNBRG00000013629	UPF2	99	83.947	Neolamprologus_brichardi
ENSMGAG00000004573	UPF2	99	92.610	ENSNLEG00000012058	UPF2	99	92.610	Nomascus_leucogenys
ENSMGAG00000004573	UPF2	57	100.000	ENSMEUG00000002180	-	60	100.000	Notamacropus_eugenii
ENSMGAG00000004573	UPF2	77	98.592	ENSOPRG00000006801	-	77	98.592	Ochotona_princeps
ENSMGAG00000004573	UPF2	99	91.660	ENSODEG00000001290	UPF2	99	92.604	Octodon_degus
ENSMGAG00000004573	UPF2	99	82.224	ENSONIG00000017991	UPF2	99	83.947	Oreochromis_niloticus
ENSMGAG00000004573	UPF2	99	91.771	ENSOCUG00000006230	UPF2	99	92.241	Oryctolagus_cuniculus
ENSMGAG00000004573	UPF2	99	82.486	ENSORLG00000017189	UPF2	99	82.602	Oryzias_latipes
ENSMGAG00000004573	UPF2	99	82.486	ENSORLG00020005969	UPF2	99	82.680	Oryzias_latipes_hni
ENSMGAG00000004573	UPF2	99	82.486	ENSORLG00015005713	UPF2	99	82.680	Oryzias_latipes_hsok
ENSMGAG00000004573	UPF2	99	79.937	ENSOMEG00000023420	UPF2	98	80.126	Oryzias_melastigma
ENSMGAG00000004573	UPF2	99	93.234	ENSOGAG00000005796	UPF2	99	93.234	Otolemur_garnettii
ENSMGAG00000004573	UPF2	99	93.166	ENSOARG00000014587	UPF2	99	93.166	Ovis_aries
ENSMGAG00000004573	UPF2	99	89.045	ENSPPAG00000037953	UPF2	99	89.519	Pan_paniscus
ENSMGAG00000004573	UPF2	99	93.627	ENSPPRG00000000690	UPF2	99	93.627	Panthera_pardus
ENSMGAG00000004573	UPF2	99	93.627	ENSPTIG00000008867	UPF2	99	93.627	Panthera_tigris_altaica
ENSMGAG00000004573	UPF2	99	92.683	ENSPTRG00000002291	UPF2	99	92.447	Pan_troglodytes
ENSMGAG00000004573	UPF2	99	92.846	ENSPANG00000023399	UPF2	99	92.846	Papio_anubis
ENSMGAG00000004573	UPF2	99	82.864	ENSPKIG00000025502	UPF2	99	82.081	Paramormyrops_kingsleyae
ENSMGAG00000004573	UPF2	59	93.369	ENSPSIG00000015158	UPF2	95	93.369	Pelodiscus_sinensis
ENSMGAG00000004573	UPF2	99	81.560	ENSPMGG00000005259	UPF2	99	81.768	Periophthalmus_magnuspinnatus
ENSMGAG00000004573	UPF2	93	90.962	ENSPEMG00000015731	Upf2	99	90.962	Peromyscus_maniculatus_bairdii
ENSMGAG00000004573	UPF2	99	93.691	ENSPCIG00000006656	UPF2	99	93.691	Phascolarctos_cinereus
ENSMGAG00000004573	UPF2	99	82.381	ENSPFOG00000017118	UPF2	99	82.694	Poecilia_formosa
ENSMGAG00000004573	UPF2	99	82.422	ENSPLAG00000005094	UPF2	99	82.694	Poecilia_latipinna
ENSMGAG00000004573	UPF2	99	82.422	ENSPMEG00000017009	UPF2	99	82.694	Poecilia_mexicana
ENSMGAG00000004573	UPF2	99	82.431	ENSPREG00000021880	UPF2	99	83.019	Poecilia_reticulata
ENSMGAG00000004573	UPF2	66	94.139	ENSPPYG00000002089	-	99	94.139	Pongo_abelii
ENSMGAG00000004573	UPF2	99	79.528	ENSPCAG00000000684	UPF2	90	84.191	Procavia_capensis
ENSMGAG00000004573	UPF2	99	90.071	ENSPCOG00000021656	UPF2	99	89.835	Propithecus_coquereli
ENSMGAG00000004573	UPF2	99	86.006	ENSPVAG00000017286	UPF2	99	86.006	Pteropus_vampyrus
ENSMGAG00000004573	UPF2	99	79.765	ENSPNYG00000017096	UPF2	99	81.490	Pundamilia_nyererei
ENSMGAG00000004573	UPF2	99	83.178	ENSPNAG00000009357	UPF2	99	82.632	Pygocentrus_nattereri
ENSMGAG00000004573	UPF2	99	87.549	ENSRNOG00000023593	Upf2	99	98.876	Rattus_norvegicus
ENSMGAG00000004573	UPF2	99	91.489	ENSRBIG00000037780	UPF2	99	91.017	Rhinopithecus_bieti
ENSMGAG00000004573	UPF2	99	92.296	ENSRROG00000043547	UPF2	99	91.824	Rhinopithecus_roxellana
ENSMGAG00000004573	UPF2	99	91.496	ENSSBOG00000020012	UPF2	99	90.787	Saimiri_boliviensis_boliviensis
ENSMGAG00000004573	UPF2	99	83.125	ENSSFOG00015023788	upf2	99	83.594	Scleropages_formosus
ENSMGAG00000004573	UPF2	90	83.927	ENSSMAG00000007637	UPF2	99	80.031	Scophthalmus_maximus
ENSMGAG00000004573	UPF2	99	83.425	ENSSDUG00000017244	UPF2	99	83.555	Seriola_dumerili
ENSMGAG00000004573	UPF2	99	81.961	ENSSLDG00000016866	UPF2	99	81.604	Seriola_lalandi_dorsalis
ENSMGAG00000004573	UPF2	99	92.211	ENSSARG00000008615	UPF2	99	92.211	Sorex_araneus
ENSMGAG00000004573	UPF2	100	90.881	ENSSPUG00000014544	UPF2	99	90.881	Sphenodon_punctatus
ENSMGAG00000004573	UPF2	68	94.694	ENSSSCG00000011117	-	99	94.925	Sus_scrofa
ENSMGAG00000004573	UPF2	99	96.296	ENSTGUG00000002163	-	100	96.296	Taeniopygia_guttata
ENSMGAG00000004573	UPF2	99	82.109	ENSTRUG00000007519	UPF2	99	82.381	Takifugu_rubripes
ENSMGAG00000004573	UPF2	93	85.267	ENSTBEG00000012679	UPF2	93	84.759	Tupaia_belangeri
ENSMGAG00000004573	UPF2	99	91.503	ENSTTRG00000016388	UPF2	99	92.762	Tursiops_truncatus
ENSMGAG00000004573	UPF2	92	97.203	ENSUAMG00000023560	UPF2	98	100.000	Ursus_americanus
ENSMGAG00000004573	UPF2	99	93.548	ENSUMAG00000012953	UPF2	95	93.548	Ursus_maritimus
ENSMGAG00000004573	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMGAG00000004573	UPF2	99	93.627	ENSVVUG00000006166	UPF2	99	93.627	Vulpes_vulpes
ENSMGAG00000004573	UPF2	99	84.422	ENSXETG00000033103	UPF2	91	89.053	Xenopus_tropicalis
ENSMGAG00000004573	UPF2	99	81.911	ENSXCOG00000011604	UPF2	99	82.431	Xiphophorus_couchianus
ENSMGAG00000004573	UPF2	99	82.188	ENSXMAG00000017209	UPF2	99	82.381	Xiphophorus_maculatus