EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000004769 (Gene tree)
Gene ID: 100551124
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 17645 bases
Position: chr21:5744667-5762311
Accession: 100551124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000004718	RRM_4	PF10598.9	1.9e-48	1	1
ENSMGAP00000004718	U5_2-snRNA_bdg	PF10597.9	3.6e-74	1	1
ENSMGAP00000004718	PRO8NT	PF08082.11	3.6e-87	1	1
ENSMGAP00000004718	U6-snRNA_bdg	PF10596.9	8.9e-90	1	1
ENSMGAP00000004718	PROCN	PF08083.11	4.6e-237	1	1
ENSMGAP00000004718	PRP8_domainIV	PF12134.8	2.1e-130	1	1
ENSMGAP00000004718	PROCT	PF08084.11	3.9e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000005439	PRPF8-201	7008	XM_003211741	ENSMGAP00000004718	2335 (aa)	XP_003211789	G1N031

Gene Model

Click here to download ENSMGAG00000004769's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000004769's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000004769	PRPF8	100	99.443	ENSG00000174231	PRPF8	100	99.443	Homo_sapiens
ENSMGAG00000004769	PRPF8	100	97.861	ENSAPOG00000010079	prpf8	100	97.861	Acanthochromis_polyacanthus
ENSMGAG00000004769	PRPF8	100	99.443	ENSAMEG00000007940	PRPF8	100	99.443	Ailuropoda_melanoleuca
ENSMGAG00000004769	PRPF8	100	95.966	ENSACIG00000018280	prpf8	100	95.966	Amphilophus_citrinellus
ENSMGAG00000004769	PRPF8	100	97.861	ENSAOCG00000010725	prpf8	100	97.861	Amphiprion_ocellaris
ENSMGAG00000004769	PRPF8	100	97.861	ENSAPEG00000014397	prpf8	100	97.861	Amphiprion_percula
ENSMGAG00000004769	PRPF8	100	97.263	ENSATEG00000010062	prpf8	100	97.263	Anabas_testudineus
ENSMGAG00000004769	PRPF8	96	99.867	ENSAPLG00000010357	PRPF8	100	99.867	Anas_platyrhynchos
ENSMGAG00000004769	PRPF8	82	97.677	ENSACAG00000014784	PRPF8	99	97.677	Anolis_carolinensis
ENSMGAG00000004769	PRPF8	100	99.443	ENSANAG00000032629	PRPF8	100	99.443	Aotus_nancymaae
ENSMGAG00000004769	PRPF8	100	97.489	ENSACLG00000020858	prpf8	100	97.489	Astatotilapia_calliptera
ENSMGAG00000004769	PRPF8	100	97.901	ENSAMXG00000020291	prpf8	100	97.901	Astyanax_mexicanus
ENSMGAG00000004769	PRPF8	100	99.443	ENSBTAG00000011488	PRPF8	100	99.443	Bos_taurus
ENSMGAG00000004769	PRPF8	99	86.535	WBGene00004187	prp-8	99	86.621	Caenorhabditis_elegans
ENSMGAG00000004769	PRPF8	100	99.443	ENSCJAG00000001911	PRPF8	100	99.443	Callithrix_jacchus
ENSMGAG00000004769	PRPF8	100	99.443	ENSCAFG00000019221	PRPF8	100	99.443	Canis_familiaris
ENSMGAG00000004769	PRPF8	96	99.688	ENSCAFG00020009943	PRPF8	100	99.688	Canis_lupus_dingo
ENSMGAG00000004769	PRPF8	100	99.443	ENSCHIG00000017499	PRPF8	100	99.443	Capra_hircus
ENSMGAG00000004769	PRPF8	100	99.443	ENSTSYG00000014120	PRPF8	100	99.443	Carlito_syrichta
ENSMGAG00000004769	PRPF8	96	97.461	ENSCAPG00000009459	PRPF8	99	97.461	Cavia_aperea
ENSMGAG00000004769	PRPF8	100	99.443	ENSCPOG00000010379	PRPF8	100	99.443	Cavia_porcellus
ENSMGAG00000004769	PRPF8	100	99.443	ENSCCAG00000031983	-	100	99.443	Cebus_capucinus
ENSMGAG00000004769	PRPF8	100	99.443	ENSCATG00000038595	PRPF8	100	99.443	Cercocebus_atys
ENSMGAG00000004769	PRPF8	100	99.443	ENSCLAG00000004388	PRPF8	100	99.443	Chinchilla_lanigera
ENSMGAG00000004769	PRPF8	100	99.443	ENSCSAG00000013929	PRPF8	100	99.443	Chlorocebus_sabaeus
ENSMGAG00000004769	PRPF8	81	98.000	ENSCHOG00000008590	PRPF8	88	98.000	Choloepus_hoffmanni
ENSMGAG00000004769	PRPF8	100	99.786	ENSCPBG00000020409	PRPF8	100	99.786	Chrysemys_picta_bellii
ENSMGAG00000004769	PRPF8	99	92.993	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSMGAG00000004769	PRPF8	100	99.443	ENSCANG00000043088	PRPF8	100	99.443	Colobus_angolensis_palliatus
ENSMGAG00000004769	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSMGAG00000004769	PRPF8	100	97.777	ENSCSEG00000007905	prpf8	100	97.777	Cynoglossus_semilaevis
ENSMGAG00000004769	PRPF8	100	97.652	ENSDARG00000026180	prpf8	100	97.652	Danio_rerio
ENSMGAG00000004769	PRPF8	93	99.448	ENSDNOG00000018471	PRPF8	99	99.448	Dasypus_novemcinctus
ENSMGAG00000004769	PRPF8	84	98.652	ENSDORG00000006185	Prpf8	96	98.652	Dipodomys_ordii
ENSMGAG00000004769	PRPF8	99	91.624	FBgn0033688	Prp8	97	91.624	Drosophila_melanogaster
ENSMGAG00000004769	PRPF8	100	94.004	ENSETEG00000017592	PRPF8	100	94.004	Echinops_telfairi
ENSMGAG00000004769	PRPF8	99	93.763	ENSEBUG00000006548	prpf8	99	93.763	Eptatretus_burgeri
ENSMGAG00000004769	PRPF8	100	99.443	ENSEASG00005009514	PRPF8	100	99.443	Equus_asinus_asinus
ENSMGAG00000004769	PRPF8	97	99.692	ENSECAG00000021318	PRPF8	100	99.692	Equus_caballus
ENSMGAG00000004769	PRPF8	67	99.259	ENSEEUG00000012120	-	67	99.259	Erinaceus_europaeus
ENSMGAG00000004769	PRPF8	98	96.591	ENSELUG00000007120	prpf8	99	96.591	Esox_lucius
ENSMGAG00000004769	PRPF8	100	99.443	ENSFCAG00000006297	PRPF8	100	99.443	Felis_catus
ENSMGAG00000004769	PRPF8	100	99.914	ENSFALG00000006628	PRPF8	100	99.914	Ficedula_albicollis
ENSMGAG00000004769	PRPF8	100	99.443	ENSFDAG00000004711	PRPF8	100	99.443	Fukomys_damarensis
ENSMGAG00000004769	PRPF8	100	97.566	ENSFHEG00000021084	prpf8	100	97.566	Fundulus_heteroclitus
ENSMGAG00000004769	PRPF8	100	95.516	ENSGMOG00000002028	prpf8	99	95.516	Gadus_morhua
ENSMGAG00000004769	PRPF8	100	100.000	ENSGALG00000002943	PRPF8	100	100.000	Gallus_gallus
ENSMGAG00000004769	PRPF8	99	97.851	ENSGAFG00000010337	prpf8	99	97.851	Gambusia_affinis
ENSMGAG00000004769	PRPF8	100	97.730	ENSGACG00000008504	prpf8	100	97.730	Gasterosteus_aculeatus
ENSMGAG00000004769	PRPF8	100	99.700	ENSGAGG00000008350	PRPF8	100	99.700	Gopherus_agassizii
ENSMGAG00000004769	PRPF8	100	99.443	ENSGGOG00000005516	PRPF8	100	99.443	Gorilla_gorilla
ENSMGAG00000004769	PRPF8	100	97.773	ENSHBUG00000016192	prpf8	100	97.773	Haplochromis_burtoni
ENSMGAG00000004769	PRPF8	100	99.443	ENSHGLG00000012029	PRPF8	100	99.443	Heterocephalus_glaber_female
ENSMGAG00000004769	PRPF8	100	99.443	ENSHGLG00100016494	PRPF8	100	99.443	Heterocephalus_glaber_male
ENSMGAG00000004769	PRPF8	100	97.649	ENSHCOG00000016414	prpf8	100	97.649	Hippocampus_comes
ENSMGAG00000004769	PRPF8	100	97.733	ENSIPUG00000023230	prpf8	100	97.733	Ictalurus_punctatus
ENSMGAG00000004769	PRPF8	100	99.443	ENSSTOG00000005128	PRPF8	100	99.443	Ictidomys_tridecemlineatus
ENSMGAG00000004769	PRPF8	100	97.259	ENSJJAG00000021159	Prpf8	100	97.259	Jaculus_jaculus
ENSMGAG00000004769	PRPF8	99	97.979	ENSKMAG00000016118	prpf8	99	97.979	Kryptolebias_marmoratus
ENSMGAG00000004769	PRPF8	100	97.605	ENSLBEG00000026903	prpf8	100	97.605	Labrus_bergylta
ENSMGAG00000004769	PRPF8	95	96.072	ENSLACG00000010479	PRPF8	99	98.599	Latimeria_chalumnae
ENSMGAG00000004769	PRPF8	99	98.031	ENSLOCG00000005409	prpf8	99	98.031	Lepisosteus_oculatus
ENSMGAG00000004769	PRPF8	100	99.443	ENSLAFG00000015445	PRPF8	100	99.443	Loxodonta_africana
ENSMGAG00000004769	PRPF8	100	99.443	ENSMFAG00000039995	PRPF8	100	99.443	Macaca_fascicularis
ENSMGAG00000004769	PRPF8	100	99.443	ENSMMUG00000004820	PRPF8	100	99.443	Macaca_mulatta
ENSMGAG00000004769	PRPF8	100	99.443	ENSMNEG00000035713	PRPF8	100	99.443	Macaca_nemestrina
ENSMGAG00000004769	PRPF8	100	99.443	ENSMLEG00000037937	PRPF8	100	99.443	Mandrillus_leucophaeus
ENSMGAG00000004769	PRPF8	100	97.861	ENSMAMG00000008919	prpf8	100	97.861	Mastacembelus_armatus
ENSMGAG00000004769	PRPF8	100	97.489	ENSMZEG00005015073	prpf8	100	97.489	Maylandia_zebra
ENSMGAG00000004769	PRPF8	100	99.400	ENSMICG00000010320	PRPF8	100	99.400	Microcebus_murinus
ENSMGAG00000004769	PRPF8	100	99.400	ENSMOCG00000016838	Prpf8	100	99.400	Microtus_ochrogaster
ENSMGAG00000004769	PRPF8	100	97.348	ENSMMOG00000011887	prpf8	100	97.348	Mola_mola
ENSMGAG00000004769	PRPF8	100	99.443	ENSMODG00000010480	PRPF8	100	99.443	Monodelphis_domestica
ENSMGAG00000004769	PRPF8	97	97.621	ENSMALG00000003558	prpf8	100	97.621	Monopterus_albus
ENSMGAG00000004769	PRPF8	100	99.358	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.358	Mus_caroli
ENSMGAG00000004769	PRPF8	100	99.358	ENSMUSG00000020850	Prpf8	100	99.358	Mus_musculus
ENSMGAG00000004769	PRPF8	100	99.315	MGP_PahariEiJ_G0017877	Prpf8	100	99.315	Mus_pahari
ENSMGAG00000004769	PRPF8	100	99.358	MGP_SPRETEiJ_G0017583	Prpf8	100	99.358	Mus_spretus
ENSMGAG00000004769	PRPF8	100	99.443	ENSMPUG00000013227	PRPF8	100	99.443	Mustela_putorius_furo
ENSMGAG00000004769	PRPF8	100	99.230	ENSMLUG00000002666	PRPF8	100	99.230	Myotis_lucifugus
ENSMGAG00000004769	PRPF8	100	97.645	ENSNGAG00000005305	Prpf8	100	97.645	Nannospalax_galili
ENSMGAG00000004769	PRPF8	100	97.532	ENSNBRG00000013127	prpf8	100	97.532	Neolamprologus_brichardi
ENSMGAG00000004769	PRPF8	97	97.508	ENSNLEG00000000897	PRPF8	98	97.508	Nomascus_leucogenys
ENSMGAG00000004769	PRPF8	99	97.870	ENSMEUG00000015999	PRPF8	100	97.870	Notamacropus_eugenii
ENSMGAG00000004769	PRPF8	100	97.901	ENSOPRG00000003102	PRPF8	100	97.901	Ochotona_princeps
ENSMGAG00000004769	PRPF8	100	99.443	ENSODEG00000008468	PRPF8	100	99.443	Octodon_degus
ENSMGAG00000004769	PRPF8	100	97.447	ENSONIG00000008153	prpf8	100	97.447	Oreochromis_niloticus
ENSMGAG00000004769	PRPF8	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSMGAG00000004769	PRPF8	100	99.443	ENSOCUG00000000081	PRPF8	100	99.443	Oryctolagus_cuniculus
ENSMGAG00000004769	PRPF8	100	97.026	ENSORLG00000008036	prpf8	100	97.026	Oryzias_latipes
ENSMGAG00000004769	PRPF8	100	96.985	ENSORLG00020021070	prpf8	100	96.985	Oryzias_latipes_hni
ENSMGAG00000004769	PRPF8	100	97.026	ENSORLG00015002340	prpf8	100	97.026	Oryzias_latipes_hsok
ENSMGAG00000004769	PRPF8	100	95.582	ENSOMEG00000016866	prpf8	100	95.582	Oryzias_melastigma
ENSMGAG00000004769	PRPF8	100	99.316	ENSOARG00000013312	PRPF8	100	99.316	Ovis_aries
ENSMGAG00000004769	PRPF8	100	99.443	ENSPPAG00000042753	PRPF8	100	99.443	Pan_paniscus
ENSMGAG00000004769	PRPF8	100	99.443	ENSPPRG00000008746	PRPF8	100	99.443	Panthera_pardus
ENSMGAG00000004769	PRPF8	100	99.358	ENSPTIG00000019200	PRPF8	100	99.358	Panthera_tigris_altaica
ENSMGAG00000004769	PRPF8	100	99.443	ENSPTRG00000039576	PRPF8	100	99.443	Pan_troglodytes
ENSMGAG00000004769	PRPF8	99	99.696	ENSPANG00000024607	PRPF8	98	99.696	Papio_anubis
ENSMGAG00000004769	PRPF8	100	97.699	ENSPKIG00000011201	prpf8	100	97.699	Paramormyrops_kingsleyae
ENSMGAG00000004769	PRPF8	100	99.743	ENSPSIG00000013393	PRPF8	100	99.743	Pelodiscus_sinensis
ENSMGAG00000004769	PRPF8	100	99.400	ENSPEMG00000021699	Prpf8	100	99.400	Peromyscus_maniculatus_bairdii
ENSMGAG00000004769	PRPF8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSMGAG00000004769	PRPF8	100	99.443	ENSPCIG00000022603	PRPF8	100	99.688	Phascolarctos_cinereus
ENSMGAG00000004769	PRPF8	100	97.031	ENSPFOG00000007005	prpf8	100	97.031	Poecilia_formosa
ENSMGAG00000004769	PRPF8	100	96.488	ENSPLAG00000020777	prpf8	100	96.488	Poecilia_latipinna
ENSMGAG00000004769	PRPF8	100	97.031	ENSPMEG00000004051	prpf8	100	97.031	Poecilia_mexicana
ENSMGAG00000004769	PRPF8	100	97.901	ENSPREG00000021902	prpf8	100	97.901	Poecilia_reticulata
ENSMGAG00000004769	PRPF8	100	99.443	ENSPPYG00000007777	PRPF8	100	99.443	Pongo_abelii
ENSMGAG00000004769	PRPF8	90	99.010	ENSPCAG00000008938	PRPF8	90	99.010	Procavia_capensis
ENSMGAG00000004769	PRPF8	100	99.400	ENSPCOG00000015182	PRPF8	100	99.400	Propithecus_coquereli
ENSMGAG00000004769	PRPF8	93	99.446	ENSPVAG00000002134	PRPF8	93	99.446	Pteropus_vampyrus
ENSMGAG00000004769	PRPF8	100	97.773	ENSPNYG00000016356	prpf8	100	97.773	Pundamilia_nyererei
ENSMGAG00000004769	PRPF8	100	97.819	ENSPNAG00000009247	prpf8	100	97.819	Pygocentrus_nattereri
ENSMGAG00000004769	PRPF8	100	99.358	ENSRNOG00000003495	Prpf8	100	99.358	Rattus_norvegicus
ENSMGAG00000004769	PRPF8	100	99.443	ENSRBIG00000031219	PRPF8	100	99.443	Rhinopithecus_bieti
ENSMGAG00000004769	PRPF8	100	99.443	ENSRROG00000038014	PRPF8	100	99.443	Rhinopithecus_roxellana
ENSMGAG00000004769	PRPF8	99	62.559	YHR165C	PRP8	95	62.602	Saccharomyces_cerevisiae
ENSMGAG00000004769	PRPF8	100	99.443	ENSSBOG00000029717	PRPF8	100	99.443	Saimiri_boliviensis_boliviensis
ENSMGAG00000004769	PRPF8	100	99.400	ENSSHAG00000006167	PRPF8	100	99.400	Sarcophilus_harrisii
ENSMGAG00000004769	PRPF8	100	97.694	ENSSFOG00015013905	prpf8	100	97.694	Scleropages_formosus
ENSMGAG00000004769	PRPF8	100	97.648	ENSSMAG00000017736	prpf8	100	97.648	Scophthalmus_maximus
ENSMGAG00000004769	PRPF8	100	97.861	ENSSDUG00000003029	prpf8	100	97.861	Seriola_dumerili
ENSMGAG00000004769	PRPF8	68	98.874	ENSSLDG00000017096	prpf8	100	98.874	Seriola_lalandi_dorsalis
ENSMGAG00000004769	PRPF8	87	97.882	ENSSARG00000002892	PRPF8	87	97.882	Sorex_araneus
ENSMGAG00000004769	PRPF8	100	99.486	ENSSPUG00000007463	PRPF8	100	99.486	Sphenodon_punctatus
ENSMGAG00000004769	PRPF8	100	97.263	ENSSPAG00000015639	prpf8	100	97.263	Stegastes_partitus
ENSMGAG00000004769	PRPF8	100	99.443	ENSSSCG00000017817	PRPF8	100	99.443	Sus_scrofa
ENSMGAG00000004769	PRPF8	100	99.914	ENSTGUG00000005648	-	100	99.914	Taeniopygia_guttata
ENSMGAG00000004769	PRPF8	52	99.825	ENSTGUG00000015597	-	95	99.825	Taeniopygia_guttata
ENSMGAG00000004769	PRPF8	100	97.648	ENSTRUG00000015906	prpf8	100	97.648	Takifugu_rubripes
ENSMGAG00000004769	PRPF8	95	98.865	ENSTNIG00000003460	prpf8	99	98.865	Tetraodon_nigroviridis
ENSMGAG00000004769	PRPF8	93	99.796	ENSTBEG00000006431	PRPF8	93	99.796	Tupaia_belangeri
ENSMGAG00000004769	PRPF8	100	98.844	ENSTTRG00000006869	PRPF8	100	98.844	Tursiops_truncatus
ENSMGAG00000004769	PRPF8	54	98.500	ENSUAMG00000015644	-	96	98.500	Ursus_americanus
ENSMGAG00000004769	PRPF8	100	99.186	ENSUMAG00000009385	PRPF8	100	99.186	Ursus_maritimus
ENSMGAG00000004769	PRPF8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSMGAG00000004769	PRPF8	100	99.443	ENSVVUG00000021695	PRPF8	99	99.443	Vulpes_vulpes
ENSMGAG00000004769	PRPF8	100	98.673	ENSXETG00000022259	prpf8	100	98.673	Xenopus_tropicalis
ENSMGAG00000004769	PRPF8	100	97.523	ENSXCOG00000012775	prpf8	100	97.523	Xiphophorus_couchianus
ENSMGAG00000004769	PRPF8	100	97.566	ENSXMAG00000008505	prpf8	100	97.566	Xiphophorus_maculatus