EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000004976 (Gene tree)
Gene ID: -
Gene Symbol: LSM4
Alias: -
Full Name: LSM4 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 95854 bases
Position: chr30:3242071-3337924
Accession: 17259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000004844	LSM	PF01423.22	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000005566	LSM4-201	741	-	ENSMGAP00000004844	139 (aa)	-	G1N0C4

Gene Model

Click here to download ENSMGAG00000004976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000004976's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000004976	LSM4	99	89.855	ENSG00000130520	LSM4	99	82.734	Homo_sapiens
ENSMGAG00000004976	LSM4	71	97.959	ENSAPOG00000005643	lsm4	89	75.912	Acanthochromis_polyacanthus
ENSMGAG00000004976	LSM4	100	89.928	ENSAMEG00000011162	LSM4	95	82.857	Ailuropoda_melanoleuca
ENSMGAG00000004976	LSM4	71	97.959	ENSAOCG00000006414	lsm4	92	76.087	Amphiprion_ocellaris
ENSMGAG00000004976	LSM4	71	97.959	ENSAPEG00000006238	lsm4	89	77.612	Amphiprion_percula
ENSMGAG00000004976	LSM4	71	97.959	ENSATEG00000016559	lsm4	89	75.912	Anabas_testudineus
ENSMGAG00000004976	LSM4	99	89.855	ENSANAG00000034659	LSM4	99	82.734	Aotus_nancymaae
ENSMGAG00000004976	LSM4	96	80.714	ENSACLG00000022738	lsm4	94	77.143	Astatotilapia_calliptera
ENSMGAG00000004976	LSM4	96	88.060	ENSAMXG00000016932	lsm4	94	84.328	Astyanax_mexicanus
ENSMGAG00000004976	LSM4	100	89.928	ENSBTAG00000008578	LSM4	100	82.857	Bos_taurus
ENSMGAG00000004976	LSM4	59	76.829	WBGene00003078	lsm-4	67	76.829	Caenorhabditis_elegans
ENSMGAG00000004976	LSM4	99	89.855	ENSCJAG00000014171	LSM4	99	82.734	Callithrix_jacchus
ENSMGAG00000004976	LSM4	99	89.781	ENSCAFG00000014900	LSM4	90	82.609	Canis_familiaris
ENSMGAG00000004976	LSM4	99	89.855	ENSCAFG00020012137	LSM4	99	82.734	Canis_lupus_dingo
ENSMGAG00000004976	LSM4	100	89.928	ENSCHIG00000010928	LSM4	92	82.857	Capra_hircus
ENSMGAG00000004976	LSM4	99	89.130	ENSTSYG00000030906	LSM4	99	82.014	Carlito_syrichta
ENSMGAG00000004976	LSM4	99	88.406	ENSCAPG00000014140	LSM4	99	82.014	Cavia_aperea
ENSMGAG00000004976	LSM4	99	88.406	ENSCPOG00000024117	LSM4	99	82.014	Cavia_porcellus
ENSMGAG00000004976	LSM4	99	89.855	ENSCCAG00000036308	LSM4	99	82.734	Cebus_capucinus
ENSMGAG00000004976	LSM4	99	89.855	ENSCATG00000029311	LSM4	99	82.734	Cercocebus_atys
ENSMGAG00000004976	LSM4	99	86.957	ENSCLAG00000010828	LSM4	99	81.295	Chinchilla_lanigera
ENSMGAG00000004976	LSM4	99	89.855	ENSCSAG00000005370	LSM4	99	82.734	Chlorocebus_sabaeus
ENSMGAG00000004976	LSM4	99	98.551	ENSCPBG00000012925	LSM4	99	98.551	Chrysemys_picta_bellii
ENSMGAG00000004976	LSM4	62	91.860	ENSCING00000007519	-	93	74.419	Ciona_intestinalis
ENSMGAG00000004976	LSM4	62	91.860	ENSCSAVG00000008596	-	99	73.643	Ciona_savignyi
ENSMGAG00000004976	LSM4	99	89.855	ENSCANG00000043686	LSM4	99	82.734	Colobus_angolensis_palliatus
ENSMGAG00000004976	LSM4	99	87.681	ENSCGRG00001014436	Lsm4	99	80.576	Cricetulus_griseus_chok1gshd
ENSMGAG00000004976	LSM4	99	87.681	ENSCGRG00000009398	Lsm4	100	80.576	Cricetulus_griseus_crigri
ENSMGAG00000004976	LSM4	69	96.875	ENSCSEG00000016127	lsm4	94	79.259	Cynoglossus_semilaevis
ENSMGAG00000004976	LSM4	96	83.088	ENSCVAG00000010601	lsm4	94	78.676	Cyprinodon_variegatus
ENSMGAG00000004976	LSM4	86	79.508	ENSCVAG00000021828	lsm4	92	76.230	Cyprinodon_variegatus
ENSMGAG00000004976	LSM4	98	84.507	ENSDARG00000023852	lsm4	99	83.803	Danio_rerio
ENSMGAG00000004976	LSM4	99	88.406	ENSDORG00000024225	Lsm4	99	82.014	Dipodomys_ordii
ENSMGAG00000004976	LSM4	69	81.250	FBgn0032240	CG17768	56	87.356	Drosophila_melanogaster
ENSMGAG00000004976	LSM4	89	88.710	ENSETEG00000007762	-	100	80.800	Echinops_telfairi
ENSMGAG00000004976	LSM4	54	92.000	ENSEBUG00000003639	-	52	88.608	Eptatretus_burgeri
ENSMGAG00000004976	LSM4	99	89.855	ENSECAG00000010141	LSM4	56	82.734	Equus_caballus
ENSMGAG00000004976	LSM4	95	89.552	ENSELUG00000012821	lsm4	100	83.582	Esox_lucius
ENSMGAG00000004976	LSM4	99	89.855	ENSFCAG00000040580	LSM4	99	82.734	Felis_catus
ENSMGAG00000004976	LSM4	100	99.281	ENSFALG00000009478	LSM4	100	99.281	Ficedula_albicollis
ENSMGAG00000004976	LSM4	99	87.681	ENSFDAG00000010124	LSM4	100	82.014	Fukomys_damarensis
ENSMGAG00000004976	LSM4	70	98.969	ENSGMOG00000007729	lsm4	94	86.331	Gadus_morhua
ENSMGAG00000004976	LSM4	99	99.275	ENSGALG00000003385	LSM4	99	99.275	Gallus_gallus
ENSMGAG00000004976	LSM4	96	82.353	ENSGAFG00000004903	lsm4	91	72.951	Gambusia_affinis
ENSMGAG00000004976	LSM4	68	98.936	ENSGACG00000008140	lsm4	86	86.047	Gasterosteus_aculeatus
ENSMGAG00000004976	LSM4	99	98.551	ENSGAGG00000017812	LSM4	99	98.551	Gopherus_agassizii
ENSMGAG00000004976	LSM4	99	89.855	ENSGGOG00000012914	-	99	82.734	Gorilla_gorilla
ENSMGAG00000004976	LSM4	96	81.295	ENSHBUG00000008858	lsm4	61	95.370	Haplochromis_burtoni
ENSMGAG00000004976	LSM4	99	86.957	ENSHGLG00000006568	LSM4	99	82.014	Heterocephalus_glaber_female
ENSMGAG00000004976	LSM4	67	96.774	ENSHGLG00100007894	LSM4	100	96.774	Heterocephalus_glaber_male
ENSMGAG00000004976	LSM4	96	80.451	ENSHCOG00000008819	lsm4	94	78.519	Hippocampus_comes
ENSMGAG00000004976	LSM4	96	88.060	ENSIPUG00000005368	Lsm4	94	84.328	Ictalurus_punctatus
ENSMGAG00000004976	LSM4	99	89.855	ENSSTOG00000016494	LSM4	99	82.734	Ictidomys_tridecemlineatus
ENSMGAG00000004976	LSM4	99	87.681	ENSJJAG00000017420	Lsm4	99	81.295	Jaculus_jaculus
ENSMGAG00000004976	LSM4	61	98.824	ENSKMAG00000005073	lsm4	94	75.912	Kryptolebias_marmoratus
ENSMGAG00000004976	LSM4	71	97.959	ENSLBEG00000027930	lsm4	94	79.577	Labrus_bergylta
ENSMGAG00000004976	LSM4	96	96.296	ENSLACG00000015861	LSM4	96	96.296	Latimeria_chalumnae
ENSMGAG00000004976	LSM4	96	94.776	ENSLOCG00000002025	lsm4	94	94.776	Lepisosteus_oculatus
ENSMGAG00000004976	LSM4	100	89.928	ENSLAFG00000017459	LSM4	100	82.857	Loxodonta_africana
ENSMGAG00000004976	LSM4	99	89.855	ENSMFAG00000031194	LSM4	99	82.734	Macaca_fascicularis
ENSMGAG00000004976	LSM4	99	89.855	ENSMMUG00000004405	LSM4	99	82.734	Macaca_mulatta
ENSMGAG00000004976	LSM4	99	89.855	ENSMNEG00000042899	LSM4	99	82.734	Macaca_nemestrina
ENSMGAG00000004976	LSM4	99	89.855	ENSMLEG00000027948	LSM4	99	82.734	Mandrillus_leucophaeus
ENSMGAG00000004976	LSM4	96	81.955	ENSMAMG00000006190	lsm4	94	78.519	Mastacembelus_armatus
ENSMGAG00000004976	LSM4	96	81.295	ENSMZEG00005016420	lsm4	94	77.698	Maylandia_zebra
ENSMGAG00000004976	LSM4	99	89.130	ENSMICG00000000222	LSM4	99	82.014	Microcebus_murinus
ENSMGAG00000004976	LSM4	99	87.681	ENSMOCG00000020861	Lsm4	99	80.576	Microtus_ochrogaster
ENSMGAG00000004976	LSM4	89	91.129	ENSMODG00000015044	-	100	83.200	Monodelphis_domestica
ENSMGAG00000004976	LSM4	96	79.851	ENSMALG00000018159	lsm4	94	77.206	Monopterus_albus
ENSMGAG00000004976	LSM4	99	87.681	MGP_CAROLIEiJ_G0031158	Lsm4	99	80.576	Mus_caroli
ENSMGAG00000004976	LSM4	99	87.681	ENSMUSG00000031848	Lsm4	99	80.576	Mus_musculus
ENSMGAG00000004976	LSM4	99	87.681	MGP_PahariEiJ_G0021623	Lsm4	99	80.576	Mus_pahari
ENSMGAG00000004976	LSM4	99	87.681	MGP_SPRETEiJ_G0032276	Lsm4	99	80.576	Mus_spretus
ENSMGAG00000004976	LSM4	99	89.855	ENSMPUG00000015589	LSM4	99	82.734	Mustela_putorius_furo
ENSMGAG00000004976	LSM4	100	89.928	ENSMLUG00000004010	LSM4	100	82.857	Myotis_lucifugus
ENSMGAG00000004976	LSM4	99	87.681	ENSNGAG00000008644	Lsm4	100	79.851	Nannospalax_galili
ENSMGAG00000004976	LSM4	71	97.980	ENSNBRG00000022150	lsm4	54	100.000	Neolamprologus_brichardi
ENSMGAG00000004976	LSM4	89	87.097	ENSMEUG00000013229	LSM4	100	79.200	Notamacropus_eugenii
ENSMGAG00000004976	LSM4	89	82.400	ENSOPRG00000005575	LSM4	100	76.800	Ochotona_princeps
ENSMGAG00000004976	LSM4	99	63.768	ENSODEG00000011712	-	99	58.273	Octodon_degus
ENSMGAG00000004976	LSM4	99	87.681	ENSODEG00000020549	-	99	82.014	Octodon_degus
ENSMGAG00000004976	LSM4	99	78.261	ENSODEG00000004519	-	99	73.381	Octodon_degus
ENSMGAG00000004976	LSM4	96	80.714	ENSONIG00000012724	lsm4	94	77.143	Oreochromis_niloticus
ENSMGAG00000004976	LSM4	79	94.737	ENSOANG00000007434	LSM4	98	94.737	Ornithorhynchus_anatinus
ENSMGAG00000004976	LSM4	99	80.435	ENSORLG00000008391	lsm4	94	76.087	Oryzias_latipes
ENSMGAG00000004976	LSM4	99	80.435	ENSORLG00020014829	lsm4	94	76.087	Oryzias_latipes_hni
ENSMGAG00000004976	LSM4	99	80.435	ENSORLG00015010205	lsm4	94	76.087	Oryzias_latipes_hsok
ENSMGAG00000004976	LSM4	99	80.435	ENSOMEG00000003606	lsm4	94	76.087	Oryzias_melastigma
ENSMGAG00000004976	LSM4	72	97.000	ENSOGAG00000027992	LSM4	90	81.818	Otolemur_garnettii
ENSMGAG00000004976	LSM4	63	98.851	ENSOARG00000012553	LSM4	94	81.667	Ovis_aries
ENSMGAG00000004976	LSM4	99	89.855	ENSPPAG00000044045	-	99	82.734	Pan_paniscus
ENSMGAG00000004976	LSM4	99	89.855	ENSPPRG00000018264	LSM4	99	82.734	Panthera_pardus
ENSMGAG00000004976	LSM4	99	89.855	ENSPTIG00000006306	LSM4	100	82.734	Panthera_tigris_altaica
ENSMGAG00000004976	LSM4	99	89.855	ENSPTRG00000031470	LSM4	99	82.734	Pan_troglodytes
ENSMGAG00000004976	LSM4	99	89.855	ENSPANG00000014399	LSM4	99	82.734	Papio_anubis
ENSMGAG00000004976	LSM4	96	89.474	ENSPKIG00000006154	lsm4	94	84.962	Paramormyrops_kingsleyae
ENSMGAG00000004976	LSM4	99	97.826	ENSPSIG00000012358	LSM4	100	97.826	Pelodiscus_sinensis
ENSMGAG00000004976	LSM4	100	87.050	ENSPEMG00000001358	Lsm4	99	80.576	Peromyscus_maniculatus_bairdii
ENSMGAG00000004976	LSM4	96	83.088	ENSPFOG00000000570	lsm4	71	77.941	Poecilia_formosa
ENSMGAG00000004976	LSM4	96	86.765	ENSPLAG00000016267	lsm4	94	78.676	Poecilia_latipinna
ENSMGAG00000004976	LSM4	96	82.353	ENSPMEG00000016378	lsm4	94	77.941	Poecilia_mexicana
ENSMGAG00000004976	LSM4	71	97.959	ENSPREG00000011290	lsm4	71	78.676	Poecilia_reticulata
ENSMGAG00000004976	LSM4	99	89.855	ENSPPYG00000009736	LSM4	99	82.734	Pongo_abelii
ENSMGAG00000004976	LSM4	89	88.710	ENSPCAG00000008513	LSM4	100	80.800	Procavia_capensis
ENSMGAG00000004976	LSM4	99	89.130	ENSPCOG00000019837	LSM4	99	82.014	Propithecus_coquereli
ENSMGAG00000004976	LSM4	99	89.855	ENSPVAG00000015383	LSM4	99	82.734	Pteropus_vampyrus
ENSMGAG00000004976	LSM4	96	81.295	ENSPNYG00000016794	lsm4	94	77.698	Pundamilia_nyererei
ENSMGAG00000004976	LSM4	96	87.313	ENSPNAG00000016598	lsm4	99	82.836	Pygocentrus_nattereri
ENSMGAG00000004976	LSM4	99	87.681	ENSRNOG00000019572	Lsm4	99	80.576	Rattus_norvegicus
ENSMGAG00000004976	LSM4	99	89.855	ENSRBIG00000024717	LSM4	99	82.734	Rhinopithecus_bieti
ENSMGAG00000004976	LSM4	99	89.855	ENSRROG00000045706	LSM4	99	82.734	Rhinopithecus_roxellana
ENSMGAG00000004976	LSM4	59	40.217	YER112W	LSM4	51	39.583	Saccharomyces_cerevisiae
ENSMGAG00000004976	LSM4	90	88.800	ENSSBOG00000022455	LSM4	100	80.952	Saimiri_boliviensis_boliviensis
ENSMGAG00000004976	LSM4	99	95.683	ENSSHAG00000011559	LSM4	99	95.683	Sarcophilus_harrisii
ENSMGAG00000004976	LSM4	96	87.970	ENSSFOG00015021067	lsm4	94	83.459	Scleropages_formosus
ENSMGAG00000004976	LSM4	71	96.939	ENSSMAG00000021020	lsm4	92	75.000	Scophthalmus_maximus
ENSMGAG00000004976	LSM4	71	97.959	ENSSDUG00000009588	lsm4	81	76.087	Seriola_dumerili
ENSMGAG00000004976	LSM4	71	97.959	ENSSLDG00000006827	lsm4	81	76.087	Seriola_lalandi_dorsalis
ENSMGAG00000004976	LSM4	94	87.218	ENSSPUG00000010166	LSM4	57	100.000	Sphenodon_punctatus
ENSMGAG00000004976	LSM4	71	97.959	ENSSPAG00000011615	lsm4	87	77.612	Stegastes_partitus
ENSMGAG00000004976	LSM4	99	89.855	ENSSSCG00000034314	LSM4	99	82.734	Sus_scrofa
ENSMGAG00000004976	LSM4	96	80.882	ENSTRUG00000021737	lsm4	94	76.471	Takifugu_rubripes
ENSMGAG00000004976	LSM4	96	86.029	ENSTNIG00000010191	lsm4	94	83.088	Tetraodon_nigroviridis
ENSMGAG00000004976	LSM4	100	89.928	ENSUAMG00000000665	LSM4	100	82.857	Ursus_americanus
ENSMGAG00000004976	LSM4	99	89.855	ENSUMAG00000009013	LSM4	99	82.734	Ursus_maritimus
ENSMGAG00000004976	LSM4	100	89.209	ENSVVUG00000008136	LSM4	71	82.143	Vulpes_vulpes
ENSMGAG00000004976	LSM4	99	88.406	ENSXETG00000024933	lsm4	99	83.333	Xenopus_tropicalis
ENSMGAG00000004976	LSM4	96	82.353	ENSXMAG00000026672	lsm4	71	77.206	Xiphophorus_maculatus