EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000004990 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 12292 bases
Position: chr5:6534690-6546981
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000004938	CPSF_A	PF03178.15	6.5e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000005663	DDB1-201	3512	-	ENSMGAP00000004938	1074 (aa)	-	G1N0I8

Gene Model

Click here to download ENSMGAG00000004990's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03420	Nucleotide excision repair	KEGG
mgp04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000004990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000004990	DDB1	100	96.369	ENSG00000167986	DDB1	94	96.369	Homo_sapiens
ENSMGAG00000004990	DDB1	98	90.076	ENSAPOG00000005036	ddb1	93	90.560	Acanthochromis_polyacanthus
ENSMGAG00000004990	DDB1	100	96.462	ENSAMEG00000016518	DDB1	94	96.462	Ailuropoda_melanoleuca
ENSMGAG00000004990	DDB1	85	90.779	ENSACIG00000020624	ddb1	93	90.779	Amphilophus_citrinellus
ENSMGAG00000004990	DDB1	100	89.944	ENSAOCG00000003066	ddb1	94	89.944	Amphiprion_ocellaris
ENSMGAG00000004990	DDB1	100	90.037	ENSAPEG00000000092	ddb1	94	90.037	Amphiprion_percula
ENSMGAG00000004990	DDB1	94	90.755	ENSATEG00000020571	ddb1	91	90.755	Anabas_testudineus
ENSMGAG00000004990	DDB1	100	99.069	ENSAPLG00000007174	DDB1	95	99.069	Anas_platyrhynchos
ENSMGAG00000004990	DDB1	100	96.555	ENSACAG00000017758	DDB1	94	96.555	Anolis_carolinensis
ENSMGAG00000004990	DDB1	100	96.369	ENSANAG00000021878	DDB1	94	96.369	Aotus_nancymaae
ENSMGAG00000004990	DDB1	100	90.317	ENSACLG00000012401	ddb1	94	90.317	Astatotilapia_calliptera
ENSMGAG00000004990	DDB1	100	96.462	ENSBTAG00000021569	DDB1	88	96.462	Bos_taurus
ENSMGAG00000004990	DDB1	99	37.500	WBGene00010890	ddb-1	93	37.500	Caenorhabditis_elegans
ENSMGAG00000004990	DDB1	100	96.369	ENSCJAG00000019319	DDB1	94	96.369	Callithrix_jacchus
ENSMGAG00000004990	DDB1	100	96.462	ENSCAFG00000016264	DDB1	94	96.462	Canis_familiaris
ENSMGAG00000004990	DDB1	94	96.627	ENSCAFG00020012722	DDB1	93	96.627	Canis_lupus_dingo
ENSMGAG00000004990	DDB1	100	96.462	ENSCHIG00000014969	DDB1	94	96.462	Capra_hircus
ENSMGAG00000004990	DDB1	100	95.996	ENSTSYG00000008027	DDB1	94	95.996	Carlito_syrichta
ENSMGAG00000004990	DDB1	100	95.810	ENSCAPG00000010786	DDB1	96	95.810	Cavia_aperea
ENSMGAG00000004990	DDB1	100	95.810	ENSCPOG00000009956	DDB1	94	95.810	Cavia_porcellus
ENSMGAG00000004990	DDB1	100	96.369	ENSCCAG00000035883	DDB1	94	96.369	Cebus_capucinus
ENSMGAG00000004990	DDB1	100	93.831	ENSCATG00000044495	DDB1	94	93.831	Cercocebus_atys
ENSMGAG00000004990	DDB1	100	95.903	ENSCLAG00000004126	DDB1	94	95.903	Chinchilla_lanigera
ENSMGAG00000004990	DDB1	100	96.369	ENSCSAG00000006392	DDB1	94	96.369	Chlorocebus_sabaeus
ENSMGAG00000004990	DDB1	87	90.395	ENSCHOG00000011377	DDB1	83	90.395	Choloepus_hoffmanni
ENSMGAG00000004990	DDB1	100	97.579	ENSCPBG00000017728	DDB1	94	97.579	Chrysemys_picta_bellii
ENSMGAG00000004990	DDB1	100	61.142	ENSCING00000007437	-	94	61.142	Ciona_intestinalis
ENSMGAG00000004990	DDB1	100	60.147	ENSCSAVG00000004783	-	100	60.147	Ciona_savignyi
ENSMGAG00000004990	DDB1	100	96.369	ENSCANG00000019948	DDB1	94	96.369	Colobus_angolensis_palliatus
ENSMGAG00000004990	DDB1	100	96.462	ENSCGRG00001016599	Ddb1	94	96.462	Cricetulus_griseus_chok1gshd
ENSMGAG00000004990	DDB1	100	96.462	ENSCGRG00000013427	Ddb1	94	96.462	Cricetulus_griseus_crigri
ENSMGAG00000004990	DDB1	92	90.222	ENSCSEG00000012499	ddb1	91	89.712	Cynoglossus_semilaevis
ENSMGAG00000004990	DDB1	93	90.538	ENSCVAG00000019531	ddb1	93	90.538	Cyprinodon_variegatus
ENSMGAG00000004990	DDB1	100	87.535	ENSDARG00000074431	ddb1	94	87.662	Danio_rerio
ENSMGAG00000004990	DDB1	94	96.055	ENSDNOG00000014884	DDB1	92	96.055	Dasypus_novemcinctus
ENSMGAG00000004990	DDB1	83	96.053	ENSDORG00000000127	Ddb1	93	96.053	Dipodomys_ordii
ENSMGAG00000004990	DDB1	99	60.946	FBgn0260962	pic	94	60.946	Drosophila_melanogaster
ENSMGAG00000004990	DDB1	69	96.757	ENSETEG00000001053	-	65	96.757	Echinops_telfairi
ENSMGAG00000004990	DDB1	76	84.390	ENSEBUG00000014593	ddb1	90	84.390	Eptatretus_burgeri
ENSMGAG00000004990	DDB1	100	96.276	ENSEASG00005008184	DDB1	94	96.276	Equus_asinus_asinus
ENSMGAG00000004990	DDB1	100	96.369	ENSECAG00000012136	DDB1	94	96.369	Equus_caballus
ENSMGAG00000004990	DDB1	84	94.613	ENSEEUG00000003194	DDB1	79	94.613	Erinaceus_europaeus
ENSMGAG00000004990	DDB1	100	89.944	ENSELUG00000023868	ddb1	94	89.944	Esox_lucius
ENSMGAG00000004990	DDB1	100	96.462	ENSFCAG00000029716	DDB1	94	96.462	Felis_catus
ENSMGAG00000004990	DDB1	100	98.976	ENSFALG00000011981	DDB1	94	98.976	Ficedula_albicollis
ENSMGAG00000004990	DDB1	100	95.996	ENSFDAG00000005128	DDB1	94	95.996	Fukomys_damarensis
ENSMGAG00000004990	DDB1	91	90.698	ENSFHEG00000022133	ddb1	93	90.698	Fundulus_heteroclitus
ENSMGAG00000004990	DDB1	84	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSMGAG00000004990	DDB1	100	99.255	ENSGALG00000042333	DDB1	94	99.255	Gallus_gallus
ENSMGAG00000004990	DDB1	93	90.239	ENSGAFG00000013142	ddb1	93	90.239	Gambusia_affinis
ENSMGAG00000004990	DDB1	95	89.171	ENSGACG00000017182	ddb1	94	89.171	Gasterosteus_aculeatus
ENSMGAG00000004990	DDB1	100	97.672	ENSGAGG00000014124	DDB1	99	97.672	Gopherus_agassizii
ENSMGAG00000004990	DDB1	100	96.369	ENSGGOG00000004052	DDB1	94	96.369	Gorilla_gorilla
ENSMGAG00000004990	DDB1	100	90.317	ENSHBUG00000008873	ddb1	99	90.317	Haplochromis_burtoni
ENSMGAG00000004990	DDB1	100	95.996	ENSHGLG00000018430	DDB1	94	95.996	Heterocephalus_glaber_female
ENSMGAG00000004990	DDB1	100	94.879	ENSHGLG00100014475	DDB1	94	94.879	Heterocephalus_glaber_male
ENSMGAG00000004990	DDB1	94	89.703	ENSHCOG00000018670	ddb1	92	89.703	Hippocampus_comes
ENSMGAG00000004990	DDB1	100	89.479	ENSIPUG00000005612	DDB1	94	89.479	Ictalurus_punctatus
ENSMGAG00000004990	DDB1	100	96.369	ENSSTOG00000007552	DDB1	94	96.369	Ictidomys_tridecemlineatus
ENSMGAG00000004990	DDB1	100	96.369	ENSJJAG00000017769	Ddb1	94	96.369	Jaculus_jaculus
ENSMGAG00000004990	DDB1	93	90.339	ENSKMAG00000002315	ddb1	93	90.339	Kryptolebias_marmoratus
ENSMGAG00000004990	DDB1	85	90.560	ENSLBEG00000017065	ddb1	94	90.560	Labrus_bergylta
ENSMGAG00000004990	DDB1	100	93.855	ENSLACG00000017611	DDB1	94	93.855	Latimeria_chalumnae
ENSMGAG00000004990	DDB1	91	82.486	ENSLOCG00000000012	ddb1	93	82.486	Lepisosteus_oculatus
ENSMGAG00000004990	DDB1	100	96.182	ENSLAFG00000011513	DDB1	94	96.182	Loxodonta_africana
ENSMGAG00000004990	DDB1	100	96.369	ENSMFAG00000042035	DDB1	94	96.369	Macaca_fascicularis
ENSMGAG00000004990	DDB1	99	96.432	ENSMMUG00000002691	DDB1	94	96.432	Macaca_mulatta
ENSMGAG00000004990	DDB1	100	96.369	ENSMNEG00000031559	DDB1	94	96.369	Macaca_nemestrina
ENSMGAG00000004990	DDB1	100	96.369	ENSMLEG00000044136	DDB1	94	96.369	Mandrillus_leucophaeus
ENSMGAG00000004990	DDB1	100	90.410	ENSMAMG00000014372	ddb1	94	90.410	Mastacembelus_armatus
ENSMGAG00000004990	DDB1	100	90.223	ENSMZEG00005013835	ddb1	94	90.223	Maylandia_zebra
ENSMGAG00000004990	DDB1	100	96.462	ENSMAUG00000012926	Ddb1	94	96.462	Mesocricetus_auratus
ENSMGAG00000004990	DDB1	100	96.369	ENSMICG00000013703	DDB1	94	96.369	Microcebus_murinus
ENSMGAG00000004990	DDB1	100	96.462	ENSMOCG00000020499	Ddb1	94	96.462	Microtus_ochrogaster
ENSMGAG00000004990	DDB1	85	90.450	ENSMMOG00000001758	ddb1	93	90.450	Mola_mola
ENSMGAG00000004990	DDB1	89	95.670	ENSMODG00000020353	DDB1	94	87.708	Monodelphis_domestica
ENSMGAG00000004990	DDB1	100	90.317	ENSMALG00000014071	ddb1	94	90.317	Monopterus_albus
ENSMGAG00000004990	DDB1	100	96.462	MGP_CAROLIEiJ_G0022695	Ddb1	94	96.462	Mus_caroli
ENSMGAG00000004990	DDB1	100	96.369	ENSMUSG00000024740	Ddb1	94	96.369	Mus_musculus
ENSMGAG00000004990	DDB1	100	96.462	MGP_PahariEiJ_G0014189	Ddb1	94	96.462	Mus_pahari
ENSMGAG00000004990	DDB1	100	96.462	MGP_SPRETEiJ_G0023609	Ddb1	94	96.462	Mus_spretus
ENSMGAG00000004990	DDB1	100	93.110	ENSMPUG00000014200	DDB1	94	93.110	Mustela_putorius_furo
ENSMGAG00000004990	DDB1	100	96.369	ENSMLUG00000013232	DDB1	94	96.369	Myotis_lucifugus
ENSMGAG00000004990	DDB1	100	96.369	ENSNGAG00000009384	Ddb1	94	96.369	Nannospalax_galili
ENSMGAG00000004990	DDB1	100	90.410	ENSNBRG00000019581	ddb1	94	90.410	Neolamprologus_brichardi
ENSMGAG00000004990	DDB1	100	93.186	ENSNLEG00000002022	DDB1	94	93.186	Nomascus_leucogenys
ENSMGAG00000004990	DDB1	91	96.516	ENSMEUG00000001099	DDB1	88	96.516	Notamacropus_eugenii
ENSMGAG00000004990	DDB1	96	88.781	ENSOPRG00000008254	DDB1	90	88.781	Ochotona_princeps
ENSMGAG00000004990	DDB1	100	95.717	ENSODEG00000002419	DDB1	94	95.717	Octodon_degus
ENSMGAG00000004990	DDB1	100	90.317	ENSONIG00000005804	ddb1	94	90.317	Oreochromis_niloticus
ENSMGAG00000004990	DDB1	96	96.812	ENSOANG00000004897	DDB1	100	96.812	Ornithorhynchus_anatinus
ENSMGAG00000004990	DDB1	100	96.555	ENSOCUG00000001667	DDB1	94	96.555	Oryctolagus_cuniculus
ENSMGAG00000004990	DDB1	94	90.387	ENSORLG00000001399	ddb1	91	90.638	Oryzias_latipes
ENSMGAG00000004990	DDB1	94	90.387	ENSORLG00020001277	ddb1	90	90.387	Oryzias_latipes_hni
ENSMGAG00000004990	DDB1	95	89.784	ENSORLG00015002080	ddb1	93	89.784	Oryzias_latipes_hsok
ENSMGAG00000004990	DDB1	93	91.135	ENSOMEG00000006181	ddb1	91	91.135	Oryzias_melastigma
ENSMGAG00000004990	DDB1	100	96.369	ENSOGAG00000016103	DDB1	94	96.369	Otolemur_garnettii
ENSMGAG00000004990	DDB1	98	96.594	ENSOARG00000011716	DDB1	92	96.594	Ovis_aries
ENSMGAG00000004990	DDB1	100	96.369	ENSPPAG00000035343	DDB1	94	96.369	Pan_paniscus
ENSMGAG00000004990	DDB1	100	96.462	ENSPPRG00000013300	DDB1	94	96.462	Panthera_pardus
ENSMGAG00000004990	DDB1	100	96.462	ENSPTIG00000006909	DDB1	94	96.462	Panthera_tigris_altaica
ENSMGAG00000004990	DDB1	100	96.369	ENSPTRG00000003737	DDB1	94	96.369	Pan_troglodytes
ENSMGAG00000004990	DDB1	100	96.369	ENSPANG00000000242	DDB1	94	96.369	Papio_anubis
ENSMGAG00000004990	DDB1	95	89.314	ENSPKIG00000019213	ddb1	89	89.314	Paramormyrops_kingsleyae
ENSMGAG00000004990	DDB1	100	97.119	ENSPSIG00000013275	DDB1	95	97.119	Pelodiscus_sinensis
ENSMGAG00000004990	DDB1	85	90.450	ENSPMGG00000021179	ddb1	93	90.450	Periophthalmus_magnuspinnatus
ENSMGAG00000004990	DDB1	100	96.462	ENSPEMG00000012241	Ddb1	94	96.462	Peromyscus_maniculatus_bairdii
ENSMGAG00000004990	DDB1	90	86.481	ENSPMAG00000008479	ddb1	95	86.481	Petromyzon_marinus
ENSMGAG00000004990	DDB1	100	96.834	ENSPCIG00000002643	DDB1	94	96.834	Phascolarctos_cinereus
ENSMGAG00000004990	DDB1	100	89.944	ENSPFOG00000002768	ddb1	94	89.944	Poecilia_formosa
ENSMGAG00000004990	DDB1	100	89.665	ENSPLAG00000017227	ddb1	94	89.665	Poecilia_latipinna
ENSMGAG00000004990	DDB1	100	89.665	ENSPMEG00000011398	ddb1	94	89.665	Poecilia_mexicana
ENSMGAG00000004990	DDB1	94	90.258	ENSPREG00000004440	ddb1	91	90.258	Poecilia_reticulata
ENSMGAG00000004990	DDB1	100	91.659	ENSPPYG00000003193	DDB1	94	91.659	Pongo_abelii
ENSMGAG00000004990	DDB1	84	96.137	ENSPCAG00000011040	DDB1	79	96.137	Procavia_capensis
ENSMGAG00000004990	DDB1	100	95.167	ENSPCOG00000015176	DDB1	94	95.167	Propithecus_coquereli
ENSMGAG00000004990	DDB1	100	96.276	ENSPVAG00000003847	DDB1	94	96.276	Pteropus_vampyrus
ENSMGAG00000004990	DDB1	52	90.747	ENSPNYG00000010482	ddb1	100	90.747	Pundamilia_nyererei
ENSMGAG00000004990	DDB1	93	90.637	ENSPNAG00000006635	ddb1	91	90.637	Pygocentrus_nattereri
ENSMGAG00000004990	DDB1	100	96.369	ENSRNOG00000020715	Ddb1	94	96.369	Rattus_norvegicus
ENSMGAG00000004990	DDB1	100	96.369	ENSRBIG00000033611	DDB1	94	96.432	Rhinopithecus_bieti
ENSMGAG00000004990	DDB1	100	96.369	ENSRROG00000041407	DDB1	94	96.369	Rhinopithecus_roxellana
ENSMGAG00000004990	DDB1	100	96.462	ENSSBOG00000019775	DDB1	94	96.462	Saimiri_boliviensis_boliviensis
ENSMGAG00000004990	DDB1	99	95.247	ENSSHAG00000011600	DDB1	100	95.247	Sarcophilus_harrisii
ENSMGAG00000004990	DDB1	95	89.463	ENSSFOG00015011151	ddb1	92	89.463	Scleropages_formosus
ENSMGAG00000004990	DDB1	100	89.944	ENSSMAG00000009495	ddb1	94	89.944	Scophthalmus_maximus
ENSMGAG00000004990	DDB1	100	90.223	ENSSDUG00000004642	ddb1	94	90.223	Seriola_dumerili
ENSMGAG00000004990	DDB1	100	90.223	ENSSLDG00000015804	ddb1	94	90.223	Seriola_lalandi_dorsalis
ENSMGAG00000004990	DDB1	68	100.000	ENSSARG00000003290	-	66	100.000	Sorex_araneus
ENSMGAG00000004990	DDB1	100	97.486	ENSSPUG00000019338	DDB1	94	97.486	Sphenodon_punctatus
ENSMGAG00000004990	DDB1	94	90.557	ENSSPAG00000009888	ddb1	93	90.557	Stegastes_partitus
ENSMGAG00000004990	DDB1	100	95.624	ENSSSCG00000013094	DDB1	94	95.624	Sus_scrofa
ENSMGAG00000004990	DDB1	100	98.138	ENSTGUG00000006414	DDB1	94	98.138	Taeniopygia_guttata
ENSMGAG00000004990	DDB1	94	88.724	ENSTRUG00000016682	ddb1	93	88.724	Takifugu_rubripes
ENSMGAG00000004990	DDB1	93	84.677	ENSTNIG00000009565	ddb1	99	84.677	Tetraodon_nigroviridis
ENSMGAG00000004990	DDB1	94	91.287	ENSTTRG00000011055	DDB1	90	91.287	Tursiops_truncatus
ENSMGAG00000004990	DDB1	94	96.627	ENSUAMG00000017793	DDB1	88	96.627	Ursus_americanus
ENSMGAG00000004990	DDB1	94	96.627	ENSUMAG00000011788	DDB1	92	96.627	Ursus_maritimus
ENSMGAG00000004990	DDB1	91	93.333	ENSVPAG00000007963	DDB1	87	93.333	Vicugna_pacos
ENSMGAG00000004990	DDB1	100	96.462	ENSVVUG00000004987	DDB1	94	96.462	Vulpes_vulpes
ENSMGAG00000004990	DDB1	100	91.744	ENSXETG00000008820	ddb1	94	91.744	Xenopus_tropicalis
ENSMGAG00000004990	DDB1	85	90.121	ENSXCOG00000013956	ddb1	93	90.121	Xiphophorus_couchianus
ENSMGAG00000004990	DDB1	93	90.239	ENSXMAG00000000022	ddb1	93	90.239	Xiphophorus_maculatus