EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000005180 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 40189 bases
Position: chr23:4551033-4591221
Accession: 100549795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000005072	RRM_5	PF13893.6	9.6e-07	1	1
ENSMGAP00000018625	RRM_5	PF13893.6	1.9e-06	1	1
ENSMGAP00000005072	RRM_1	PF00076.22	5e-39	1	3
ENSMGAP00000005072	RRM_1	PF00076.22	5e-39	2	3
ENSMGAP00000005072	RRM_1	PF00076.22	5e-39	3	3
ENSMGAP00000018625	RRM_1	PF00076.22	6.1e-27	1	2
ENSMGAP00000018625	RRM_1	PF00076.22	6.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000005800	-	1659	XM_019622582	ENSMGAP00000005072	553 (aa)	XP_019478127	G1N0U0
ENSMGAT00000020381	-	891	-	ENSMGAP00000018625	297 (aa)	-	G3USF2

Gene Model

Click here to download ENSMGAG00000005180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000005180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000005180	-	100	96.633	ENSG00000065526	SPEN	99	96.296	Homo_sapiens
ENSMGAG00000005180	-	98	81.461	ENSAPOG00000009853	-	91	74.532	Acanthochromis_polyacanthus
ENSMGAG00000005180	-	85	92.460	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSMGAG00000005180	-	85	89.683	ENSGAFG00000015819	-	91	73.783	Gambusia_affinis
ENSMGAG00000005180	-	96	94.195	ENSMLUG00000010144	SPEN	100	94.195	Myotis_lucifugus
ENSMGAG00000005180	-	99	81.967	ENSONIG00000006573	-	99	82.514	Oreochromis_niloticus
ENSMGAG00000005180	-	100	99.327	ENSOANG00000004165	-	100	95.785	Ornithorhynchus_anatinus
ENSMGAG00000005180	-	99	78.859	ENSPKIG00000002617	SPEN	91	80.741	Paramormyrops_kingsleyae
ENSMGAG00000005180	-	99	82.149	ENSPFOG00000024806	-	99	82.149	Poecilia_formosa
ENSMGAG00000005180	-	85	89.683	ENSPMEG00000006764	-	91	73.408	Poecilia_mexicana
ENSMGAG00000005180	-	85	89.683	ENSPREG00000010399	-	91	73.783	Poecilia_reticulata
ENSMGAG00000005180	-	98	84.181	ENSPNAG00000020795	spen	86	77.820	Pygocentrus_nattereri
ENSMGAG00000005180	-	96	95.489	ENSSHAG00000004960	SPEN	100	95.489	Sarcophilus_harrisii
ENSMGAG00000005180	-	98	82.584	ENSSDUG00000003476	-	91	75.465	Seriola_dumerili
ENSMGAG00000005180	-	98	82.584	ENSSLDG00000012950	-	91	75.465	Seriola_lalandi_dorsalis
ENSMGAG00000005180	-	98	81.461	ENSSPAG00000006014	-	91	74.532	Stegastes_partitus
ENSMGAG00000005180	-	100	98.653	ENSTGUG00000002064	-	100	98.653	Taeniopygia_guttata
ENSMGAG00000005180	-	85	89.683	ENSXMAG00000021384	-	90	72.075	Xiphophorus_maculatus