EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMGAG00000005315 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Meleagris_gallopavo
Status
putative
Strand
Plus strand
Length
21618 bases
Position
chr21:5817879-5839496
Accession
100538396
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMGAP00000005244tRNA_anti-codonPF01336.252.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMGAT00000005976RPA1-2012752XM_010721720ENSMGAP00000005244616 (aa)XP_010720022G1N189
Gene Model
Click here to download ENSMGAG00000005315's gene model file
Pathways
Pathway IDPathway NameSource
mgp03030DNA replicationKEGG
mgp03420Nucleotide excision repairKEGG
mgp03430Mismatch repairKEGG
mgp03440Homologous recombinationKEGG
mgp03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000005315's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMGAG00000005315RPA19959.770ENSAPOG00000011658rpa19960.139Acanthochromis_polyacanthus
ENSMGAG00000005315RPA19360.991ENSAPOG00000019409RPA18360.991Acanthochromis_polyacanthus
ENSMGAG00000005315RPA19875.123ENSAMEG00000007706RPA19975.123Ailuropoda_melanoleuca
ENSMGAG00000005315RPA19556.271ENSACIG00000012881RPA110056.271Amphilophus_citrinellus
ENSMGAG00000005315RPA19556.218ENSACIG00000007277rpa19956.218Amphilophus_citrinellus
ENSMGAG00000005315RPA19861.755ENSAOCG00000023376rpa19961.872Amphiprion_ocellaris
ENSMGAG00000005315RPA19853.446ENSAOCG00000009003RPA19953.571Amphiprion_ocellaris
ENSMGAG00000005315RPA19852.719ENSAPEG00000019132RPA19953.030Amphiprion_percula
ENSMGAG00000005315RPA19861.589ENSAPEG00000008634rpa19961.698Amphiprion_percula
ENSMGAG00000005315RPA19854.391ENSATEG00000006443RPA19954.391Anabas_testudineus
ENSMGAG00000005315RPA19461.815ENSATEG00000022024rpa19961.815Anabas_testudineus
ENSMGAG00000005315RPA19779.970ENSAPLG00000012442RPA110079.970Anas_platyrhynchos
ENSMGAG00000005315RPA19965.696ENSACAG00000014490RPA19966.019Anolis_carolinensis
ENSMGAG00000005315RPA19873.510ENSANAG00000023456RPA110073.510Aotus_nancymaae
ENSMGAG00000005315RPA19362.762ENSACLG00000006640rpa19962.762Astatotilapia_calliptera
ENSMGAG00000005315RPA19855.243ENSACLG00000005223RPA19955.243Astatotilapia_calliptera
ENSMGAG00000005315RPA19860.396ENSAMXG00000008418rpa19960.526Astyanax_mexicanus
ENSMGAG00000005315RPA19975.041ENSBTAG00000009711RPA19975.041Bos_taurus
ENSMGAG00000005315RPA18030.382WBGene00017546rpa-17330.382Caenorhabditis_elegans
ENSMGAG00000005315RPA19873.597ENSCJAG00000001848RPA19973.607Callithrix_jacchus
ENSMGAG00000005315RPA19973.906ENSCAFG00000019249RPA19973.906Canis_familiaris
ENSMGAG00000005315RPA19973.906ENSCAFG00020009847RPA19973.906Canis_lupus_dingo
ENSMGAG00000005315RPA19974.230ENSCHIG00000026308RPA19974.230Capra_hircus
ENSMGAG00000005315RPA19874.959ENSTSYG00000003482-9974.959Carlito_syrichta
ENSMGAG00000005315RPA19873.443ENSCPOG00000000035RPA19973.443Cavia_porcellus
ENSMGAG00000005315RPA19861.827ENSCCAG00000010981RPA19961.990Cebus_capucinus
ENSMGAG00000005315RPA19874.671ENSCLAG00000005185-9974.671Chinchilla_lanigera
ENSMGAG00000005315RPA19870.492ENSCLAG00000015045-9970.492Chinchilla_lanigera
ENSMGAG00000005315RPA19862.153ENSCSAG00000013833RPA19962.153Chlorocebus_sabaeus
ENSMGAG00000005315RPA19573.005ENSCHOG00000013540-10073.005Choloepus_hoffmanni
ENSMGAG00000005315RPA17179.271ENSCHOG00000009454-10079.271Choloepus_hoffmanni
ENSMGAG00000005315RPA19984.691ENSCPBG00000020377RPA110085.166Chrysemys_picta_bellii
ENSMGAG00000005315RPA19841.157ENSCING00000023482-9841.157Ciona_intestinalis
ENSMGAG00000005315RPA19872.637ENSCANG00000030911RPA110072.637Colobus_angolensis_palliatus
ENSMGAG00000005315RPA19974.152ENSCGRG00001008197Rpa19974.152Cricetulus_griseus_chok1gshd
ENSMGAG00000005315RPA18173.870ENSCGRG00000000582Rpa19973.870Cricetulus_griseus_crigri
ENSMGAG00000005315RPA19858.361ENSCSEG00000013066rpa19958.361Cynoglossus_semilaevis
ENSMGAG00000005315RPA19852.412ENSCSEG00000012726RPA19853.425Cynoglossus_semilaevis
ENSMGAG00000005315RPA19862.459ENSCVAG00000019431rpa19962.653Cyprinodon_variegatus
ENSMGAG00000005315RPA19451.254ENSCVAG00000013446-9551.254Cyprinodon_variegatus
ENSMGAG00000005315RPA19960.065ENSDARG00000003938rpa19960.065Danio_rerio
ENSMGAG00000005315RPA19875.537ENSDNOG00000017218RPA19875.537Dasypus_novemcinctus
ENSMGAG00000005315RPA19874.262ENSDORG00000006199Rpa19974.262Dipodomys_ordii
ENSMGAG00000005315RPA19940.488FBgn0010173RpA-709841.424Drosophila_melanogaster
ENSMGAG00000005315RPA18173.684ENSETEG00000017608RPA18173.684Echinops_telfairi
ENSMGAG00000005315RPA19874.794ENSEASG00005009372RPA110073.544Equus_asinus_asinus
ENSMGAG00000005315RPA19875.246ENSECAG00000023886RPA19975.246Equus_caballus
ENSMGAG00000005315RPA16877.619ENSEEUG00000002186-6877.619Erinaceus_europaeus
ENSMGAG00000005315RPA19861.513ENSELUG00000021071rpa19861.678Esox_lucius
ENSMGAG00000005315RPA18856.192ENSELUG00000006136RPA19956.192Esox_lucius
ENSMGAG00000005315RPA19973.948ENSFCAG00000006306RPA19973.948Felis_catus
ENSMGAG00000005315RPA19991.028ENSFALG00000006575RPA19991.028Ficedula_albicollis
ENSMGAG00000005315RPA19874.262ENSFDAG00000007720RPA19974.262Fukomys_damarensis
ENSMGAG00000005315RPA19860.963ENSFHEG00000003580rpa19860.963Fundulus_heteroclitus
ENSMGAG00000005315RPA19956.486ENSGMOG00000010382rpa19956.486Gadus_morhua
ENSMGAG00000005315RPA19997.876ENSGALG00000003072RPA19997.876Gallus_gallus
ENSMGAG00000005315RPA19853.221ENSGAFG00000020953RPA19953.374Gambusia_affinis
ENSMGAG00000005315RPA19861.730ENSGAFG00000012916rpa19861.730Gambusia_affinis
ENSMGAG00000005315RPA19959.868ENSGACG00000010856rpa19959.704Gasterosteus_aculeatus
ENSMGAG00000005315RPA19984.365ENSGAGG00000013611RPA19984.365Gopherus_agassizii
ENSMGAG00000005315RPA19872.488ENSGGOG00000014186RPA19972.488Gorilla_gorilla
ENSMGAG00000005315RPA19651.342ENSHBUG00000009348RPA19951.342Haplochromis_burtoni
ENSMGAG00000005315RPA19861.983ENSHBUG00000017773rpa19961.983Haplochromis_burtoni
ENSMGAG00000005315RPA19873.684ENSHGLG00000008846RPA19973.849Heterocephalus_glaber_female
ENSMGAG00000005315RPA19873.684ENSHGLG00100017755-9973.849Heterocephalus_glaber_male
ENSMGAG00000005315RPA19862.829ENSHGLG00100002005-9962.787Heterocephalus_glaber_male
ENSMGAG00000005315RPA19868.852ENSHGLG00100000799-9968.852Heterocephalus_glaber_male
ENSMGAG00000005315RPA19956.956ENSHCOG00000001401rpa19957.447Hippocampus_comes
ENSMGAG00000005315RPA19444.274ENSHCOG00000000351RPA19344.274Hippocampus_comes
ENSMGAG00000005315RPA19860.393ENSIPUG00000004400rpa19960.556Ictalurus_punctatus
ENSMGAG00000005315RPA19769.622ENSSTOG00000022475RPA19869.622Ictidomys_tridecemlineatus
ENSMGAG00000005315RPA19574.363ENSJJAG00000000876Rpa19874.363Jaculus_jaculus
ENSMGAG00000005315RPA19859.446ENSKMAG00000005605rpa19959.935Kryptolebias_marmoratus
ENSMGAG00000005315RPA19854.262ENSKMAG00000000234RPA19954.262Kryptolebias_marmoratus
ENSMGAG00000005315RPA19860.561ENSLBEG00000021604rpa19960.561Labrus_bergylta
ENSMGAG00000005315RPA19962.609ENSLBEG00000002281RPA18462.609Labrus_bergylta
ENSMGAG00000005315RPA18064.343ENSLACG00000007210RPA19964.343Latimeria_chalumnae
ENSMGAG00000005315RPA19863.907ENSLOCG00000006397rpa19963.907Lepisosteus_oculatus
ENSMGAG00000005315RPA19874.715ENSLAFG00000015354RPA19874.715Loxodonta_africana
ENSMGAG00000005315RPA18274.506ENSMFAG00000036138-9974.506Macaca_fascicularis
ENSMGAG00000005315RPA19867.377ENSMMUG00000002442-9967.377Macaca_mulatta
ENSMGAG00000005315RPA19874.092ENSMMUG00000011604-10074.092Macaca_mulatta
ENSMGAG00000005315RPA19573.773ENSMNEG00000031632-9873.773Macaca_nemestrina
ENSMGAG00000005315RPA18771.822ENSMNEG00000029837-9871.822Macaca_nemestrina
ENSMGAG00000005315RPA19869.028ENSMLEG00000038768-10069.028Mandrillus_leucophaeus
ENSMGAG00000005315RPA19860.000ENSMAMG00000017993rpa19960.000Mastacembelus_armatus
ENSMGAG00000005315RPA19661.574ENSMAMG00000020097RPA18960.268Mastacembelus_armatus
ENSMGAG00000005315RPA19862.314ENSMZEG00005007551rpa19962.314Maylandia_zebra
ENSMGAG00000005315RPA19855.243ENSMZEG00005024731RPA19955.243Maylandia_zebra
ENSMGAG00000005315RPA19774.542ENSMAUG00000010474Rpa19974.542Mesocricetus_auratus
ENSMGAG00000005315RPA19874.262ENSMICG00000012867RPA19974.262Microcebus_murinus
ENSMGAG00000005315RPA19973.616ENSMOCG00000013019Rpa19973.616Microtus_ochrogaster
ENSMGAG00000005315RPA19661.630ENSMMOG00000014292rpa19961.630Mola_mola
ENSMGAG00000005315RPA19854.817ENSMMOG00000010868RPA19860.455Mola_mola
ENSMGAG00000005315RPA19976.634ENSMODG00000010549RPA19976.634Monodelphis_domestica
ENSMGAG00000005315RPA19860.797ENSMALG00000011453rpa19860.963Monopterus_albus
ENSMGAG00000005315RPA19460.173ENSMALG00000001208RPA18160.173Monopterus_albus
ENSMGAG00000005315RPA19973.096MGP_CAROLIEiJ_G0016734Rpa19973.096Mus_caroli
ENSMGAG00000005315RPA19971.268ENSMUSG00000000751Rpa19971.268Mus_musculus
ENSMGAG00000005315RPA19973.226MGP_PahariEiJ_G0017871Rpa19973.226Mus_pahari
ENSMGAG00000005315RPA19971.154MGP_SPRETEiJ_G0017577Rpa19971.154Mus_spretus
ENSMGAG00000005315RPA19975.041ENSMPUG00000013119RPA19975.041Mustela_putorius_furo
ENSMGAG00000005315RPA19972.186ENSMLUG00000006113RPA19972.186Myotis_lucifugus
ENSMGAG00000005315RPA19575.085ENSNGAG00000004522Rpa19475.085Nannospalax_galili
ENSMGAG00000005315RPA19854.153ENSNBRG00000009672RPA19754.153Neolamprologus_brichardi
ENSMGAG00000005315RPA19462.912ENSNBRG00000020595rpa19962.912Neolamprologus_brichardi
ENSMGAG00000005315RPA19873.279ENSNLEG00000017149RPA19973.443Nomascus_leucogenys
ENSMGAG00000005315RPA19866.003ENSMEUG00000006714RPA19966.003Notamacropus_eugenii
ENSMGAG00000005315RPA19573.746ENSODEG00000009038RPA19673.746Octodon_degus
ENSMGAG00000005315RPA19863.322ENSONIG00000013135rpa19863.322Oreochromis_niloticus
ENSMGAG00000005315RPA19777.280ENSOANG00000010880RPA19977.280Ornithorhynchus_anatinus
ENSMGAG00000005315RPA19971.716ENSOCUG00000001504RPA19971.716Oryctolagus_cuniculus
ENSMGAG00000005315RPA19852.696ENSORLG00000003368RPA19952.696Oryzias_latipes
ENSMGAG00000005315RPA19859.835ENSORLG00000004856rpa19959.835Oryzias_latipes
ENSMGAG00000005315RPA19859.835ENSORLG00020008980rpa19959.835Oryzias_latipes_hni
ENSMGAG00000005315RPA19851.437ENSORLG00020015284RPA19951.437Oryzias_latipes_hni
ENSMGAG00000005315RPA16861.905ENSORLG00015005867-9661.905Oryzias_latipes_hsok
ENSMGAG00000005315RPA19852.904ENSORLG00015020383RPA19952.904Oryzias_latipes_hsok
ENSMGAG00000005315RPA19859.835ENSORLG00015013982rpa19959.835Oryzias_latipes_hsok
ENSMGAG00000005315RPA19456.454ENSOMEG00000011040RPA19956.454Oryzias_melastigma
ENSMGAG00000005315RPA19858.775ENSOMEG00000004704rpa19958.775Oryzias_melastigma
ENSMGAG00000005315RPA19874.262ENSOGAG00000005581-9974.262Otolemur_garnettii
ENSMGAG00000005315RPA19371.326ENSOGAG00000029379-9976.720Otolemur_garnettii
ENSMGAG00000005315RPA19974.392ENSOARG00000014479RPA19974.392Ovis_aries
ENSMGAG00000005315RPA19873.770ENSPPAG00000039680RPA19973.934Pan_paniscus
ENSMGAG00000005315RPA19974.110ENSPPRG00000011807RPA19974.110Panthera_pardus
ENSMGAG00000005315RPA19974.272ENSPTIG00000007898RPA19974.272Panthera_tigris_altaica
ENSMGAG00000005315RPA19873.770ENSPTRG00000008539RPA19973.934Pan_troglodytes
ENSMGAG00000005315RPA19874.098ENSPANG00000024592RPA19974.098Papio_anubis
ENSMGAG00000005315RPA19459.758ENSPKIG00000008053rpa19460.445Paramormyrops_kingsleyae
ENSMGAG00000005315RPA19884.106ENSPSIG00000015617RPA110084.106Pelodiscus_sinensis
ENSMGAG00000005315RPA19353.899ENSPMGG00000000543RPA19954.690Periophthalmus_magnuspinnatus
ENSMGAG00000005315RPA19561.301ENSPMGG00000011589rpa19861.473Periophthalmus_magnuspinnatus
ENSMGAG00000005315RPA19973.779ENSPEMG00000021061Rpa19973.779Peromyscus_maniculatus_bairdii
ENSMGAG00000005315RPA19974.797ENSPCIG00000019049RPA19974.959Phascolarctos_cinereus
ENSMGAG00000005315RPA19861.398ENSPFOG00000003987rpa19861.398Poecilia_formosa
ENSMGAG00000005315RPA19860.797ENSPLAG00000004984rpa19860.797Poecilia_latipinna
ENSMGAG00000005315RPA19353.420ENSPLAG00000008844-9653.420Poecilia_latipinna
ENSMGAG00000005315RPA19861.398ENSPMEG00000020602rpa19961.053Poecilia_mexicana
ENSMGAG00000005315RPA19352.932ENSPMEG00000003627-9653.583Poecilia_mexicana
ENSMGAG00000005315RPA19255.282ENSPREG00000010174rpa19555.417Poecilia_reticulata
ENSMGAG00000005315RPA19851.267ENSPREG00000010119RPA19951.487Poecilia_reticulata
ENSMGAG00000005315RPA19873.770ENSPCOG00000001799RPA19973.770Propithecus_coquereli
ENSMGAG00000005315RPA19873.607ENSPVAG00000002149RPA19973.607Pteropus_vampyrus
ENSMGAG00000005315RPA19862.149ENSPNYG00000016316rpa19962.718Pundamilia_nyererei
ENSMGAG00000005315RPA19854.930ENSPNYG00000024165RPA19954.930Pundamilia_nyererei
ENSMGAG00000005315RPA19854.620ENSPNAG00000008599rpa19654.950Pygocentrus_nattereri
ENSMGAG00000005315RPA19776.812ENSRNOG00000003123Rpa19974.756Rattus_norvegicus
ENSMGAG00000005315RPA19874.262ENSRBIG00000036587RPA19974.262Rhinopithecus_bieti
ENSMGAG00000005315RPA19870.000ENSRROG00000043278RPA19970.000Rhinopithecus_roxellana
ENSMGAG00000005315RPA19633.059YAR007CRFA19733.059Saccharomyces_cerevisiae
ENSMGAG00000005315RPA19870.462ENSSBOG00000030233RPA19970.744Saimiri_boliviensis_boliviensis
ENSMGAG00000005315RPA19975.367ENSSHAG00000007969RPA19875.530Sarcophilus_harrisii
ENSMGAG00000005315RPA19861.960ENSSFOG00015005362rpa19161.960Scleropages_formosus
ENSMGAG00000005315RPA19851.756ENSSMAG00000019746RPA19951.756Scophthalmus_maximus
ENSMGAG00000005315RPA19860.992ENSSDUG00000011949rpa19960.992Seriola_dumerili
ENSMGAG00000005315RPA19851.403ENSSDUG00000016358RPA19952.226Seriola_dumerili
ENSMGAG00000005315RPA19064.965ENSSLDG00000020784RPA19949.188Seriola_lalandi_dorsalis
ENSMGAG00000005315RPA19860.992ENSSLDG00000011806rpa19960.992Seriola_lalandi_dorsalis
ENSMGAG00000005315RPA18785.294ENSSARG00000007506RPA18985.294Sorex_araneus
ENSMGAG00000005315RPA19878.607ENSSPUG00000007223RPA110078.607Sphenodon_punctatus
ENSMGAG00000005315RPA19860.992ENSSPAG00000009903rpa19960.992Stegastes_partitus
ENSMGAG00000005315RPA19757.262ENSSPAG00000011165RPA19857.262Stegastes_partitus
ENSMGAG00000005315RPA19875.166ENSSSCG00000017822RPA110075.166Sus_scrofa
ENSMGAG00000005315RPA19991.653ENSTGUG00000005775RPA19991.653Taeniopygia_guttata
ENSMGAG00000005315RPA19861.692ENSTRUG00000003616rpa19861.692Takifugu_rubripes
ENSMGAG00000005315RPA19855.086ENSTRUG00000000405RPA18761.050Takifugu_rubripes
ENSMGAG00000005315RPA19862.211ENSTNIG00000016199rpa19962.211Tetraodon_nigroviridis
ENSMGAG00000005315RPA17978.458ENSTBEG00000002709RPA18178.458Tupaia_belangeri
ENSMGAG00000005315RPA19975.122ENSTTRG00000001169RPA19975.122Tursiops_truncatus
ENSMGAG00000005315RPA19676.596ENSUAMG00000015676RPA19784.314Ursus_americanus
ENSMGAG00000005315RPA19974.430ENSUMAG00000009328RPA19974.430Ursus_maritimus
ENSMGAG00000005315RPA19973.214ENSVPAG00000009443RPA19973.214Vicugna_pacos
ENSMGAG00000005315RPA19973.906ENSVVUG00000021715RPA19973.906Vulpes_vulpes
ENSMGAG00000005315RPA19969.106ENSXETG00000013538rpa19969.268Xenopus_tropicalis
ENSMGAG00000005315RPA19555.575ENSXCOG00000009899-9955.575Xiphophorus_couchianus
ENSMGAG00000005315RPA19260.105ENSXCOG00000010068rpa19461.191Xiphophorus_couchianus
ENSMGAG00000005315RPA19658.884ENSXMAG00000010333RPA18958.884Xiphophorus_maculatus
ENSMGAG00000005315RPA19860.899ENSXMAG00000004102rpa19962.124Xiphophorus_maculatus

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