EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000005337 (Gene tree)
Gene ID: -
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 2509 bases
Position: chr13:8202305-8204813
Accession: 30081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000005250	UPF0086	PF01868.16	7.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000005982	POP4-201	920	-	ENSMGAP00000005250	224 (aa)	-	G1N193

Gene Model

Click here to download ENSMGAG00000005337's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG
mgp03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000005337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000005337	POP4	97	69.725	ENSG00000105171	POP4	100	81.250	Homo_sapiens
ENSMGAG00000005337	POP4	98	67.273	ENSAMEG00000018329	-	100	67.273	Ailuropoda_melanoleuca
ENSMGAG00000005337	POP4	92	62.201	ENSAMEG00000003172	-	94	62.201	Ailuropoda_melanoleuca
ENSMGAG00000005337	POP4	95	60.377	ENSACIG00000008358	pop4	96	60.891	Amphilophus_citrinellus
ENSMGAG00000005337	POP4	89	60.396	ENSAOCG00000010116	pop4	98	59.406	Amphiprion_ocellaris
ENSMGAG00000005337	POP4	95	58.411	ENSAPEG00000002829	pop4	90	57.477	Amphiprion_percula
ENSMGAG00000005337	POP4	95	58.879	ENSATEG00000013028	pop4	96	57.944	Anabas_testudineus
ENSMGAG00000005337	POP4	90	87.624	ENSAPLG00000014051	POP4	98	87.624	Anas_platyrhynchos
ENSMGAG00000005337	POP4	96	69.444	ENSANAG00000020295	POP4	98	69.444	Aotus_nancymaae
ENSMGAG00000005337	POP4	99	58.371	ENSACLG00000000526	pop4	100	58.371	Astatotilapia_calliptera
ENSMGAG00000005337	POP4	98	58.447	ENSAMXG00000002899	pop4	99	58.447	Astyanax_mexicanus
ENSMGAG00000005337	POP4	98	71.233	ENSBTAG00000002223	POP4	99	71.233	Bos_taurus
ENSMGAG00000005337	POP4	96	68.203	ENSCJAG00000046750	POP4	98	75.141	Callithrix_jacchus
ENSMGAG00000005337	POP4	81	72.527	ENSCAFG00000007630	POP4	100	72.527	Canis_familiaris
ENSMGAG00000005337	POP4	98	71.233	ENSCHIG00000016743	POP4	99	71.233	Capra_hircus
ENSMGAG00000005337	POP4	97	67.890	ENSTSYG00000003488	POP4	99	67.890	Carlito_syrichta
ENSMGAG00000005337	POP4	97	48.387	ENSCAPG00000011105	POP4	100	48.387	Cavia_aperea
ENSMGAG00000005337	POP4	97	66.514	ENSCPOG00000002992	POP4	99	66.514	Cavia_porcellus
ENSMGAG00000005337	POP4	96	60.648	ENSCCAG00000034244	-	98	60.648	Cebus_capucinus
ENSMGAG00000005337	POP4	96	69.444	ENSCCAG00000020285	-	98	69.444	Cebus_capucinus
ENSMGAG00000005337	POP4	97	69.266	ENSCATG00000036022	POP4	100	79.167	Cercocebus_atys
ENSMGAG00000005337	POP4	98	66.667	ENSCLAG00000013162	POP4	99	67.431	Chinchilla_lanigera
ENSMGAG00000005337	POP4	97	70.183	ENSCSAG00000004868	POP4	100	70.183	Chlorocebus_sabaeus
ENSMGAG00000005337	POP4	96	50.463	ENSCHOG00000002071	POP4	100	50.230	Choloepus_hoffmanni
ENSMGAG00000005337	POP4	97	81.651	ENSCPBG00000016132	POP4	99	81.651	Chrysemys_picta_bellii
ENSMGAG00000005337	POP4	54	37.398	ENSCING00000023871	-	72	35.461	Ciona_intestinalis
ENSMGAG00000005337	POP4	90	72.277	ENSCANG00000005924	POP4	100	72.277	Colobus_angolensis_palliatus
ENSMGAG00000005337	POP4	97	68.349	ENSCGRG00001017185	Pop4	99	66.514	Cricetulus_griseus_chok1gshd
ENSMGAG00000005337	POP4	97	68.349	ENSCGRG00000008155	Pop4	99	66.514	Cricetulus_griseus_crigri
ENSMGAG00000005337	POP4	98	51.131	ENSCSEG00000002946	pop4	100	50.679	Cynoglossus_semilaevis
ENSMGAG00000005337	POP4	96	42.273	ENSCVAG00000018602	POP4	94	42.273	Cyprinodon_variegatus
ENSMGAG00000005337	POP4	97	58.371	ENSDARG00000101472	pop4	99	58.525	Danio_rerio
ENSMGAG00000005337	POP4	97	70.046	ENSDNOG00000047663	POP4	87	70.046	Dasypus_novemcinctus
ENSMGAG00000005337	POP4	77	62.209	ENSDORG00000008577	Pop4	100	62.209	Dipodomys_ordii
ENSMGAG00000005337	POP4	86	30.693	FBgn0035831	CG8038	71	34.932	Drosophila_melanogaster
ENSMGAG00000005337	POP4	97	56.682	ENSETEG00000003607	POP4	100	56.682	Echinops_telfairi
ENSMGAG00000005337	POP4	98	42.727	ENSEBUG00000008575	pop4	99	42.273	Eptatretus_burgeri
ENSMGAG00000005337	POP4	90	45.327	ENSEBUG00000010447	pop4	82	45.238	Eptatretus_burgeri
ENSMGAG00000005337	POP4	98	39.655	ENSEBUG00000004305	pop4	99	39.224	Eptatretus_burgeri
ENSMGAG00000005337	POP4	97	73.077	ENSECAG00000020206	POP4	77	73.077	Equus_caballus
ENSMGAG00000005337	POP4	88	52.792	ENSEEUG00000013109	POP4	99	52.792	Erinaceus_europaeus
ENSMGAG00000005337	POP4	97	57.339	ENSELUG00000019812	pop4	99	56.881	Esox_lucius
ENSMGAG00000005337	POP4	97	68.807	ENSFCAG00000001619	POP4	99	68.807	Felis_catus
ENSMGAG00000005337	POP4	98	80.822	ENSFALG00000000206	POP4	98	80.822	Ficedula_albicollis
ENSMGAG00000005337	POP4	98	67.123	ENSFDAG00000017859	POP4	99	67.123	Fukomys_damarensis
ENSMGAG00000005337	POP4	96	51.376	ENSFHEG00000012745	pop4	98	50.459	Fundulus_heteroclitus
ENSMGAG00000005337	POP4	89	57.214	ENSGMOG00000000335	pop4	99	56.219	Gadus_morhua
ENSMGAG00000005337	POP4	100	94.222	ENSGALG00000041972	POP4	95	94.222	Gallus_gallus
ENSMGAG00000005337	POP4	76	51.149	ENSGAFG00000003571	pop4	96	50.575	Gambusia_affinis
ENSMGAG00000005337	POP4	95	57.407	ENSGACG00000014510	pop4	94	63.006	Gasterosteus_aculeatus
ENSMGAG00000005337	POP4	97	82.028	ENSGAGG00000024544	POP4	78	82.028	Gopherus_agassizii
ENSMGAG00000005337	POP4	97	70.183	ENSGGOG00000038346	POP4	99	70.183	Gorilla_gorilla
ENSMGAG00000005337	POP4	99	57.466	ENSHBUG00000021821	pop4	100	57.466	Haplochromis_burtoni
ENSMGAG00000005337	POP4	97	67.890	ENSHGLG00000015798	POP4	99	67.890	Heterocephalus_glaber_female
ENSMGAG00000005337	POP4	97	67.742	ENSHGLG00100009737	POP4	99	67.742	Heterocephalus_glaber_male
ENSMGAG00000005337	POP4	99	57.014	ENSHCOG00000020937	pop4	100	57.014	Hippocampus_comes
ENSMGAG00000005337	POP4	97	57.339	ENSIPUG00000013652	pop4	99	57.339	Ictalurus_punctatus
ENSMGAG00000005337	POP4	97	67.890	ENSSTOG00000011016	POP4	99	67.890	Ictidomys_tridecemlineatus
ENSMGAG00000005337	POP4	97	68.807	ENSJJAG00000013376	Pop4	99	68.807	Jaculus_jaculus
ENSMGAG00000005337	POP4	96	60.550	ENSKMAG00000012250	pop4	98	59.633	Kryptolebias_marmoratus
ENSMGAG00000005337	POP4	95	51.869	ENSLBEG00000018846	-	100	49.776	Labrus_bergylta
ENSMGAG00000005337	POP4	95	51.869	ENSLBEG00000014139	pop4	100	49.776	Labrus_bergylta
ENSMGAG00000005337	POP4	98	68.493	ENSLACG00000008581	POP4	99	68.493	Latimeria_chalumnae
ENSMGAG00000005337	POP4	97	69.124	ENSLOCG00000005597	pop4	99	69.124	Lepisosteus_oculatus
ENSMGAG00000005337	POP4	97	68.664	ENSLAFG00000000084	POP4	99	68.664	Loxodonta_africana
ENSMGAG00000005337	POP4	97	69.725	ENSMFAG00000029606	POP4	99	69.725	Macaca_fascicularis
ENSMGAG00000005337	POP4	97	68.636	ENSMMUG00000017424	POP4	99	69.406	Macaca_mulatta
ENSMGAG00000005337	POP4	97	68.636	ENSMNEG00000031374	POP4	99	69.406	Macaca_nemestrina
ENSMGAG00000005337	POP4	97	70.183	ENSMLEG00000043454	POP4	99	70.183	Mandrillus_leucophaeus
ENSMGAG00000005337	POP4	95	58.411	ENSMAMG00000011716	pop4	96	57.477	Mastacembelus_armatus
ENSMGAG00000005337	POP4	99	58.371	ENSMZEG00005002360	pop4	100	58.371	Maylandia_zebra
ENSMGAG00000005337	POP4	97	66.055	ENSMAUG00000020110	Pop4	99	66.055	Mesocricetus_auratus
ENSMGAG00000005337	POP4	97	66.514	ENSMICG00000035730	POP4	98	66.514	Microcebus_murinus
ENSMGAG00000005337	POP4	95	56.604	ENSMMOG00000015321	pop4	99	54.545	Mola_mola
ENSMGAG00000005337	POP4	96	71.759	ENSMODG00000029406	POP4	94	71.759	Monodelphis_domestica
ENSMGAG00000005337	POP4	95	59.434	ENSMALG00000012571	pop4	100	57.014	Monopterus_albus
ENSMGAG00000005337	POP4	97	65.297	MGP_CAROLIEiJ_G0029600	Pop4	99	65.753	Mus_caroli
ENSMGAG00000005337	POP4	97	64.840	ENSMUSG00000030423	Pop4	99	64.840	Mus_musculus
ENSMGAG00000005337	POP4	97	66.055	MGP_SPRETEiJ_G0030699	Pop4	99	64.679	Mus_spretus
ENSMGAG00000005337	POP4	97	58.257	ENSMPUG00000008063	-	99	58.257	Mustela_putorius_furo
ENSMGAG00000005337	POP4	97	68.807	ENSMPUG00000008041	-	99	68.807	Mustela_putorius_furo
ENSMGAG00000005337	POP4	98	55.656	ENSMLUG00000010774	POP4	100	55.656	Myotis_lucifugus
ENSMGAG00000005337	POP4	56	77.600	ENSMEUG00000003636	-	100	77.600	Notamacropus_eugenii
ENSMGAG00000005337	POP4	88	71.717	ENSOPRG00000004736	POP4	99	71.717	Ochotona_princeps
ENSMGAG00000005337	POP4	100	64.732	ENSODEG00000013025	POP4	98	68.599	Octodon_degus
ENSMGAG00000005337	POP4	98	58.636	ENSONIG00000003458	pop4	98	58.636	Oreochromis_niloticus
ENSMGAG00000005337	POP4	97	68.807	ENSOCUG00000015974	POP4	99	68.807	Oryctolagus_cuniculus
ENSMGAG00000005337	POP4	95	58.411	ENSORLG00000020317	pop4	96	57.477	Oryzias_latipes
ENSMGAG00000005337	POP4	95	57.944	ENSORLG00015011624	pop4	96	57.009	Oryzias_latipes_hsok
ENSMGAG00000005337	POP4	95	57.944	ENSOMEG00000002538	pop4	96	57.009	Oryzias_melastigma
ENSMGAG00000005337	POP4	98	67.580	ENSOGAG00000011168	POP4	99	67.580	Otolemur_garnettii
ENSMGAG00000005337	POP4	98	70.909	ENSOARG00000004041	POP4	99	70.909	Ovis_aries
ENSMGAG00000005337	POP4	97	69.725	ENSPPAG00000040372	POP4	99	69.725	Pan_paniscus
ENSMGAG00000005337	POP4	97	68.807	ENSPPRG00000010502	POP4	99	68.807	Panthera_pardus
ENSMGAG00000005337	POP4	97	68.807	ENSPTIG00000016598	POP4	99	68.807	Panthera_tigris_altaica
ENSMGAG00000005337	POP4	97	69.725	ENSPTRG00000010779	POP4	99	69.725	Pan_troglodytes
ENSMGAG00000005337	POP4	97	69.725	ENSPANG00000008546	POP4	99	69.725	Papio_anubis
ENSMGAG00000005337	POP4	89	66.169	ENSPKIG00000004468	pop4	88	66.169	Paramormyrops_kingsleyae
ENSMGAG00000005337	POP4	98	82.648	ENSPSIG00000015690	POP4	100	84.653	Pelodiscus_sinensis
ENSMGAG00000005337	POP4	89	57.561	ENSPMGG00000008608	pop4	98	57.561	Periophthalmus_magnuspinnatus
ENSMGAG00000005337	POP4	97	55.505	ENSPEMG00000019982	-	100	55.505	Peromyscus_maniculatus_bairdii
ENSMGAG00000005337	POP4	97	66.972	ENSPEMG00000014034	-	94	70.297	Peromyscus_maniculatus_bairdii
ENSMGAG00000005337	POP4	81	51.010	ENSPMAG00000006265	pop4	100	50.000	Petromyzon_marinus
ENSMGAG00000005337	POP4	97	73.733	ENSPCIG00000024738	POP4	94	73.733	Phascolarctos_cinereus
ENSMGAG00000005337	POP4	96	55.760	ENSPFOG00000000925	pop4	98	55.760	Poecilia_formosa
ENSMGAG00000005337	POP4	96	55.300	ENSPLAG00000003161	pop4	98	55.300	Poecilia_latipinna
ENSMGAG00000005337	POP4	96	55.760	ENSPMEG00000002475	pop4	98	55.760	Poecilia_mexicana
ENSMGAG00000005337	POP4	96	56.221	ENSPREG00000022403	pop4	92	55.760	Poecilia_reticulata
ENSMGAG00000005337	POP4	97	69.266	ENSPPYG00000009805	POP4	99	69.266	Pongo_abelii
ENSMGAG00000005337	POP4	96	66.667	ENSPCAG00000007737	POP4	99	66.359	Procavia_capensis
ENSMGAG00000005337	POP4	97	68.349	ENSPCOG00000018055	POP4	99	68.349	Propithecus_coquereli
ENSMGAG00000005337	POP4	97	67.890	ENSPVAG00000006069	POP4	99	67.890	Pteropus_vampyrus
ENSMGAG00000005337	POP4	99	58.371	ENSPNYG00000020038	pop4	100	58.371	Pundamilia_nyererei
ENSMGAG00000005337	POP4	97	57.143	ENSPNAG00000005591	pop4	99	57.143	Pygocentrus_nattereri
ENSMGAG00000005337	POP4	97	67.273	ENSRNOG00000027646	Pop4	99	67.123	Rattus_norvegicus
ENSMGAG00000005337	POP4	78	65.714	ENSRBIG00000044769	POP4	89	70.290	Rhinopithecus_bieti
ENSMGAG00000005337	POP4	97	69.266	ENSRROG00000028903	POP4	99	69.266	Rhinopithecus_roxellana
ENSMGAG00000005337	POP4	56	32.374	YBR257W	-	50	32.374	Saccharomyces_cerevisiae
ENSMGAG00000005337	POP4	97	69.266	ENSSBOG00000032445	POP4	99	69.266	Saimiri_boliviensis_boliviensis
ENSMGAG00000005337	POP4	97	72.018	ENSSHAG00000016888	POP4	99	72.018	Sarcophilus_harrisii
ENSMGAG00000005337	POP4	95	61.972	ENSSFOG00015014556	pop4	95	60.377	Scleropages_formosus
ENSMGAG00000005337	POP4	95	57.944	ENSSMAG00000016611	pop4	95	59.606	Scophthalmus_maximus
ENSMGAG00000005337	POP4	95	57.477	ENSSDUG00000019865	pop4	86	56.542	Seriola_dumerili
ENSMGAG00000005337	POP4	95	57.477	ENSSLDG00000001763	pop4	96	56.542	Seriola_lalandi_dorsalis
ENSMGAG00000005337	POP4	97	68.664	ENSSARG00000004748	POP4	100	68.664	Sorex_araneus
ENSMGAG00000005337	POP4	95	60.280	ENSSPAG00000014364	pop4	98	57.727	Stegastes_partitus
ENSMGAG00000005337	POP4	97	69.725	ENSSSCG00000002854	POP4	99	69.725	Sus_scrofa
ENSMGAG00000005337	POP4	89	86.000	ENSTGUG00000008953	POP4	100	86.000	Taeniopygia_guttata
ENSMGAG00000005337	POP4	90	60.591	ENSTNIG00000006401	pop4	100	60.591	Tetraodon_nigroviridis
ENSMGAG00000005337	POP4	97	67.123	ENSTBEG00000002194	POP4	99	67.580	Tupaia_belangeri
ENSMGAG00000005337	POP4	97	71.101	ENSTTRG00000005882	POP4	99	71.101	Tursiops_truncatus
ENSMGAG00000005337	POP4	97	67.431	ENSUAMG00000003049	-	99	67.431	Ursus_americanus
ENSMGAG00000005337	POP4	97	67.431	ENSUMAG00000007522	-	99	67.431	Ursus_maritimus
ENSMGAG00000005337	POP4	95	67.281	ENSVVUG00000016876	-	76	67.281	Vulpes_vulpes
ENSMGAG00000005337	POP4	96	68.519	ENSXETG00000017598	pop4	98	66.667	Xenopus_tropicalis
ENSMGAG00000005337	POP4	96	55.251	ENSXCOG00000017695	pop4	92	54.795	Xiphophorus_couchianus
ENSMGAG00000005337	POP4	96	55.251	ENSXMAG00000013862	pop4	92	54.795	Xiphophorus_maculatus