EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMGAG00000005408 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Meleagris_gallopavo
Status
putative
Strand
Minus strand
Length
5854 bases
Position
chr25:5249655-5255508
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMGAP00000005354PABPPF00658.182.3e-3211
ENSMGAP00000005354RRM_5PF13893.63.1e-0812
ENSMGAP00000005354RRM_5PF13893.63.1e-0822
ENSMGAP00000005354RRM_1PF00076.225.2e-7013
ENSMGAP00000005354RRM_1PF00076.225.2e-7023
ENSMGAP00000005354RRM_1PF00076.225.2e-7033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMGAT00000006087PABPC4-2011764-ENSMGAP00000005354587 (aa)-G1N1H0
Gene Model
Click here to download ENSMGAG00000005408's gene model file
Pathways
Pathway IDPathway NameSource
mgp03013RNA transportKEGG
mgp03015mRNA surveillance pathwayKEGG
mgp03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000005408's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMGAG00000005408PABPC45232.857ENSMGAG00000008147-8130.483
ENSMGAG00000005408PABPC49975.552ENSMGAG00000012239PABPC19775.726
ENSMGAG00000005408PABPC45333.673ENSMGAG00000001015ELAVL19934.146
ENSMGAG00000005408PABPC45635.526ENSMGAG00000008606RBFOX15335.366
ENSMGAG00000005408PABPC49968.439ENSMGAG00000003674PABPC1L9867.581
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMGAG00000005408PABPC410087.905ENSG00000090621PABPC498100.000Homo_sapiens
ENSMGAG00000005408PABPC49982.253ENSAPOG00000001161pabpc49882.770Acanthochromis_polyacanthus
ENSMGAG00000005408PABPC49951.370ENSAMEG00000015083-8950.856Ailuropoda_melanoleuca
ENSMGAG00000005408PABPC410087.248ENSAMEG00000011535-9987.248Ailuropoda_melanoleuca
ENSMGAG00000005408PABPC410083.446ENSACIG00000023343pabpc49884.122Amphilophus_citrinellus
ENSMGAG00000005408PABPC49982.935ENSAOCG00000021529pabpc49882.939Amphiprion_ocellaris
ENSMGAG00000005408PABPC49982.935ENSAPEG00000019196pabpc49882.939Amphiprion_percula
ENSMGAG00000005408PABPC49983.135ENSATEG00000007402pabpc49883.305Anabas_testudineus
ENSMGAG00000005408PABPC410094.208ENSAPLG00000009729-10094.208Anas_platyrhynchos
ENSMGAG00000005408PABPC49991.034ENSACAG00000002544PABPC410091.034Anolis_carolinensis
ENSMGAG00000005408PABPC410087.905ENSANAG00000025079PABPC49987.905Aotus_nancymaae
ENSMGAG00000005408PABPC410082.939ENSACLG00000019558pabpc49883.615Astatotilapia_calliptera
ENSMGAG00000005408PABPC410077.119ENSAMXG00000018779pabpc49877.665Astyanax_mexicanus
ENSMGAG00000005408PABPC45191.346ENSBTAG00000048536-8691.346Bos_taurus
ENSMGAG00000005408PABPC410086.248ENSBTAG00000017125PABPC49986.418Bos_taurus
ENSMGAG00000005408PABPC46878.486ENSCJAG00000045953-9678.486Callithrix_jacchus
ENSMGAG00000005408PABPC410087.734ENSCJAG00000002512-9987.734Callithrix_jacchus
ENSMGAG00000005408PABPC410088.075ENSCAFG00000003081PABPC49988.075Canis_familiaris
ENSMGAG00000005408PABPC410087.248ENSCAFG00020004161PABPC49987.248Canis_lupus_dingo
ENSMGAG00000005408PABPC49968.718ENSCHIG00000023385-9868.718Capra_hircus
ENSMGAG00000005408PABPC410087.248ENSCHIG00000019398-9987.248Capra_hircus
ENSMGAG00000005408PABPC410087.905ENSTSYG00000006532PABPC49987.905Carlito_syrichta
ENSMGAG00000005408PABPC410087.564ENSCAPG00000015984PABPC49987.564Cavia_aperea
ENSMGAG00000005408PABPC410087.905ENSCPOG00000009552PABPC49987.905Cavia_porcellus
ENSMGAG00000005408PABPC410087.734ENSCCAG00000037306PABPC49987.734Cebus_capucinus
ENSMGAG00000005408PABPC410087.905ENSCATG00000042164PABPC49987.905Cercocebus_atys
ENSMGAG00000005408PABPC410087.564ENSCLAG00000011899PABPC49987.564Chinchilla_lanigera
ENSMGAG00000005408PABPC410087.081ENSCSAG00000001135PABPC49987.081Chlorocebus_sabaeus
ENSMGAG00000005408PABPC48291.557ENSCHOG00000005327PABPC48191.557Choloepus_hoffmanni
ENSMGAG00000005408PABPC410093.356ENSCPBG00000001038PABPC49993.356Chrysemys_picta_bellii
ENSMGAG00000005408PABPC410087.734ENSCANG00000034177PABPC49987.734Colobus_angolensis_palliatus
ENSMGAG00000005408PABPC49985.520ENSCGRG00001018166Pabpc49984.833Cricetulus_griseus_chok1gshd
ENSMGAG00000005408PABPC49986.034ENSCGRG00000009777Pabpc410083.615Cricetulus_griseus_crigri
ENSMGAG00000005408PABPC49981.895ENSCSEG00000000130pabpc49882.741Cynoglossus_semilaevis
ENSMGAG00000005408PABPC410082.601ENSCVAG00000019246pabpc49983.277Cyprinodon_variegatus
ENSMGAG00000005408PABPC49983.986ENSDARG00000059259pabpc49984.071Danio_rerio
ENSMGAG00000005408PABPC49987.931ENSDNOG00000018444-9987.931Dasypus_novemcinctus
ENSMGAG00000005408PABPC410086.905ENSDORG00000011581Pabpc49986.905Dipodomys_ordii
ENSMGAG00000005408PABPC410083.773ENSETEG00000018453-7483.976Echinops_telfairi
ENSMGAG00000005408PABPC49757.672ENSETEG00000009172-9957.672Echinops_telfairi
ENSMGAG00000005408PABPC49773.438ENSEBUG00000013782pabpc49972.835Eptatretus_burgeri
ENSMGAG00000005408PABPC49973.846ENSEBUG00000000992pabpc49873.208Eptatretus_burgeri
ENSMGAG00000005408PABPC410088.075ENSEASG00005014119PABPC49987.248Equus_asinus_asinus
ENSMGAG00000005408PABPC410088.075ENSECAG00000009396PABPC49987.248Equus_caballus
ENSMGAG00000005408PABPC49885.274ENSEEUG00000002962PABPC49984.899Erinaceus_europaeus
ENSMGAG00000005408PABPC49982.624ENSELUG00000003195pabpc49883.108Esox_lucius
ENSMGAG00000005408PABPC410088.075ENSFCAG00000015254-9988.075Felis_catus
ENSMGAG00000005408PABPC410093.186ENSFALG00000000543PABPC49993.186Ficedula_albicollis
ENSMGAG00000005408PABPC410086.577ENSFDAG00000020016-9986.745Fukomys_damarensis
ENSMGAG00000005408PABPC49957.531ENSFDAG00000010581-10054.855Fukomys_damarensis
ENSMGAG00000005408PABPC410082.601ENSFHEG00000007548pabpc49883.277Fundulus_heteroclitus
ENSMGAG00000005408PABPC410080.743ENSGMOG00000019025pabpc49881.619Gadus_morhua
ENSMGAG00000005408PABPC410095.400ENSGALG00000003800PABPC49995.400Gallus_gallus
ENSMGAG00000005408PABPC410093.247ENSGAFG00000018195pabpc49897.600Gambusia_affinis
ENSMGAG00000005408PABPC49980.912ENSGACG00000007179pabpc49882.264Gasterosteus_aculeatus
ENSMGAG00000005408PABPC410093.186ENSGAGG00000001888PABPC49993.186Gopherus_agassizii
ENSMGAG00000005408PABPC410087.905ENSGGOG00000004002PABPC49987.905Gorilla_gorilla
ENSMGAG00000005408PABPC410082.770ENSHBUG00000020206pabpc49883.446Haplochromis_burtoni
ENSMGAG00000005408PABPC410087.734ENSHGLG00000011162PABPC49987.734Heterocephalus_glaber_female
ENSMGAG00000005408PABPC410087.734ENSHGLG00100001580PABPC49987.734Heterocephalus_glaber_male
ENSMGAG00000005408PABPC49982.542ENSHCOG00000012694pabpc49883.220Hippocampus_comes
ENSMGAG00000005408PABPC49881.379ENSIPUG00000016620pabpc49981.757Ictalurus_punctatus
ENSMGAG00000005408PABPC410086.905ENSSTOG00000010416PABPC49986.905Ictidomys_tridecemlineatus
ENSMGAG00000005408PABPC410084.694ENSJJAG00000007781Pabpc49984.694Jaculus_jaculus
ENSMGAG00000005408PABPC410081.956ENSKMAG00000013597pabpc49882.293Kryptolebias_marmoratus
ENSMGAG00000005408PABPC410081.619ENSLBEG00000013654pabpc49881.250Labrus_bergylta
ENSMGAG00000005408PABPC410089.002ENSLACG00000011907PABPC49989.002Latimeria_chalumnae
ENSMGAG00000005408PABPC410085.522ENSLOCG00000001877pabpc49986.364Lepisosteus_oculatus
ENSMGAG00000005408PABPC410087.248ENSLAFG00000000151PABPC49987.248Loxodonta_africana
ENSMGAG00000005408PABPC410087.905ENSMFAG00000041481PABPC49987.905Macaca_fascicularis
ENSMGAG00000005408PABPC410087.081ENSMMUG00000007497PABPC49987.081Macaca_mulatta
ENSMGAG00000005408PABPC410087.734ENSMNEG00000043054PABPC49987.734Macaca_nemestrina
ENSMGAG00000005408PABPC410087.905ENSMLEG00000040716PABPC49987.905Mandrillus_leucophaeus
ENSMGAG00000005408PABPC49982.594ENSMAMG00000010025pabpc49882.939Mastacembelus_armatus
ENSMGAG00000005408PABPC410082.770ENSMZEG00005006141pabpc49883.446Maylandia_zebra
ENSMGAG00000005408PABPC46484.615ENSMAUG00000001295-9784.615Mesocricetus_auratus
ENSMGAG00000005408PABPC45382.500ENSMAUG00000004089-9079.839Mesocricetus_auratus
ENSMGAG00000005408PABPC46594.792ENSMAUG00000019763-6590.404Mesocricetus_auratus
ENSMGAG00000005408PABPC49971.864ENSMICG00000036729-9985.922Microcebus_murinus
ENSMGAG00000005408PABPC48884.971ENSMICG00000016633-9790.171Microcebus_murinus
ENSMGAG00000005408PABPC49987.629ENSMOCG00000006763Pabpc49986.242Microtus_ochrogaster
ENSMGAG00000005408PABPC410076.667ENSMMOG00000002363pabpc49881.145Mola_mola
ENSMGAG00000005408PABPC410089.527ENSMODG00000017657-9989.527Monodelphis_domestica
ENSMGAG00000005408PABPC45476.415ENSMODG00000018051-8976.415Monodelphis_domestica
ENSMGAG00000005408PABPC49982.823ENSMALG00000011017pabpc49882.828Monopterus_albus
ENSMGAG00000005408PABPC410086.409MGP_CAROLIEiJ_G0026435-10098.077Mus_caroli
ENSMGAG00000005408PABPC49975.601MGP_CAROLIEiJ_G0024864-9975.601Mus_caroli
ENSMGAG00000005408PABPC410087.223ENSMUSG00000011257Pabpc49897.115Mus_musculus
ENSMGAG00000005408PABPC410086.242MGP_PahariEiJ_G0028765Pabpc410098.077Mus_pahari
ENSMGAG00000005408PABPC410072.006MGP_SPRETEiJ_G0027415Pabpc410097.115Mus_spretus
ENSMGAG00000005408PABPC49649.120ENSMPUG00000006836-9248.239Mustela_putorius_furo
ENSMGAG00000005408PABPC410087.248ENSMPUG00000014414-9987.248Mustela_putorius_furo
ENSMGAG00000005408PABPC410086.542ENSMLUG00000012068PABPC49986.542Myotis_lucifugus
ENSMGAG00000005408PABPC410086.905ENSNGAG00000018292Pabpc49986.905Nannospalax_galili
ENSMGAG00000005408PABPC45591.071ENSNBRG00000010047-7291.071Neolamprologus_brichardi
ENSMGAG00000005408PABPC45597.386ENSNBRG00000009708pabpc49897.386Neolamprologus_brichardi
ENSMGAG00000005408PABPC410087.905ENSNLEG00000011928PABPC49987.905Nomascus_leucogenys
ENSMGAG00000005408PABPC48092.875ENSOPRG00000011984PABPC48592.875Ochotona_princeps
ENSMGAG00000005408PABPC410079.498ENSODEG00000017434-9979.710Octodon_degus
ENSMGAG00000005408PABPC410087.394ENSODEG00000006592-9987.394Octodon_degus
ENSMGAG00000005408PABPC45181.651ENSODEG00000013457-9981.651Octodon_degus
ENSMGAG00000005408PABPC410082.770ENSONIG00000008176pabpc49883.446Oreochromis_niloticus
ENSMGAG00000005408PABPC410091.823ENSOANG00000010001PABPC49991.823Ornithorhynchus_anatinus
ENSMGAG00000005408PABPC49586.995ENSOCUG00000000562PABPC48886.995Oryctolagus_cuniculus
ENSMGAG00000005408PABPC49993.462ENSORLG00000017479pabpc49893.462Oryzias_latipes
ENSMGAG00000005408PABPC49993.462ENSORLG00020018644pabpc49893.462Oryzias_latipes_hni
ENSMGAG00000005408PABPC49993.462ENSORLG00015015042pabpc49893.462Oryzias_latipes_hsok
ENSMGAG00000005408PABPC49982.594ENSOMEG00000014410pabpc49882.968Oryzias_melastigma
ENSMGAG00000005408PABPC410085.932ENSOGAG00000004067PABPC49986.102Otolemur_garnettii
ENSMGAG00000005408PABPC410087.248ENSOARG00000020060PABPC49987.248Ovis_aries
ENSMGAG00000005408PABPC410087.905ENSPPAG00000043625PABPC49987.905Pan_paniscus
ENSMGAG00000005408PABPC410088.075ENSPPRG00000024727PABPC49988.075Panthera_pardus
ENSMGAG00000005408PABPC410088.075ENSPTIG00000005829PABPC49988.075Panthera_tigris_altaica
ENSMGAG00000005408PABPC410087.905ENSPTRG00000000573PABPC49987.905Pan_troglodytes
ENSMGAG00000005408PABPC410088.075ENSPANG00000009484PABPC49988.075Papio_anubis
ENSMGAG00000005408PABPC49983.559ENSPKIG00000025356pabpc49883.784Paramormyrops_kingsleyae
ENSMGAG00000005408PABPC410093.526ENSPSIG00000016892PABPC49993.526Pelodiscus_sinensis
ENSMGAG00000005408PABPC410077.759ENSPMGG00000009073pabpc49876.401Periophthalmus_magnuspinnatus
ENSMGAG00000005408PABPC410086.542ENSPEMG00000023569-9986.542Peromyscus_maniculatus_bairdii
ENSMGAG00000005408PABPC410081.726ENSPEMG00000024193-9981.726Peromyscus_maniculatus_bairdii
ENSMGAG00000005408PABPC48869.476ENSPMAG00000002836pabpc49969.850Petromyzon_marinus
ENSMGAG00000005408PABPC49769.608ENSPMAG00000007885pabpc49969.290Petromyzon_marinus
ENSMGAG00000005408PABPC410097.632ENSPCIG00000020674PABPC49997.632Phascolarctos_cinereus
ENSMGAG00000005408PABPC410081.419ENSPFOG00000002682pabpc49882.770Poecilia_formosa
ENSMGAG00000005408PABPC410081.588ENSPLAG00000010112pabpc49882.939Poecilia_latipinna
ENSMGAG00000005408PABPC49982.082ENSPMEG00000019739pabpc49882.770Poecilia_mexicana
ENSMGAG00000005408PABPC410082.432ENSPREG00000001589pabpc49883.108Poecilia_reticulata
ENSMGAG00000005408PABPC410087.081ENSPPYG00000001506PABPC49987.081Pongo_abelii
ENSMGAG00000005408PABPC410082.047ENSPCAG00000003341PABPC49982.047Procavia_capensis
ENSMGAG00000005408PABPC410077.838ENSPCOG00000025882-8886.000Propithecus_coquereli
ENSMGAG00000005408PABPC410087.075ENSPCOG00000023725-9987.245Propithecus_coquereli
ENSMGAG00000005408PABPC49987.227ENSPVAG00000002187PABPC49987.227Pteropus_vampyrus
ENSMGAG00000005408PABPC410082.939ENSPNYG00000006134pabpc49883.615Pundamilia_nyererei
ENSMGAG00000005408PABPC410082.857ENSPNAG00000024355pabpc49983.389Pygocentrus_nattereri
ENSMGAG00000005408PABPC410084.524ENSRNOG00000028592AABR07035074.19984.524Rattus_norvegicus
ENSMGAG00000005408PABPC410086.395ENSRNOG00000015642Pabpc49986.395Rattus_norvegicus
ENSMGAG00000005408PABPC410087.905ENSRBIG00000039761PABPC49987.905Rhinopithecus_bieti
ENSMGAG00000005408PABPC410087.905ENSRROG00000033355PABPC49987.905Rhinopithecus_roxellana
ENSMGAG00000005408PABPC410087.905ENSSBOG00000026193PABPC49987.905Saimiri_boliviensis_boliviensis
ENSMGAG00000005408PABPC410089.779ENSSHAG00000018139PABPC49989.779Sarcophilus_harrisii
ENSMGAG00000005408PABPC49985.254ENSSFOG00015023514pabpc49984.576Scleropages_formosus
ENSMGAG00000005408PABPC49981.664ENSSMAG00000009007pabpc49882.852Scophthalmus_maximus
ENSMGAG00000005408PABPC49982.594ENSSDUG00000012683pabpc49882.601Seriola_dumerili
ENSMGAG00000005408PABPC49982.594ENSSLDG00000013025pabpc49882.601Seriola_lalandi_dorsalis
ENSMGAG00000005408PABPC49986.387ENSSARG00000000310PABPC49486.387Sorex_araneus
ENSMGAG00000005408PABPC410093.526ENSSPUG00000003204PABPC49993.526Sphenodon_punctatus
ENSMGAG00000005408PABPC49993.701ENSSPAG00000009252pabpc49593.455Stegastes_partitus
ENSMGAG00000005408PABPC49945.128ENSSSCG00000036170-9545.299Sus_scrofa
ENSMGAG00000005408PABPC410088.075ENSSSCG00000003660-9988.075Sus_scrofa
ENSMGAG00000005408PABPC410092.965ENSTGUG00000001266PABPC49992.965Taeniopygia_guttata
ENSMGAG00000005408PABPC49983.192ENSTRUG00000005907pabpc49883.871Takifugu_rubripes
ENSMGAG00000005408PABPC49977.797ENSTNIG00000016902pabpc49877.607Tetraodon_nigroviridis
ENSMGAG00000005408PABPC49977.479ENSTBEG00000009035PABPC49977.479Tupaia_belangeri
ENSMGAG00000005408PABPC49967.616ENSTTRG00000014340PABPC49976.134Tursiops_truncatus
ENSMGAG00000005408PABPC410088.075ENSUAMG00000000303PABPC49988.075Ursus_americanus
ENSMGAG00000005408PABPC410091.484ENSUMAG00000019585PABPC49992.233Ursus_maritimus
ENSMGAG00000005408PABPC47784.862ENSVPAG00000010041PABPC45484.862Vicugna_pacos
ENSMGAG00000005408PABPC410088.075ENSVVUG00000005215PABPC49988.075Vulpes_vulpes
ENSMGAG00000005408PABPC410083.475ENSXETG00000010946pabpc49983.475Xenopus_tropicalis
ENSMGAG00000005408PABPC455100.000ENSXETG00000027221-98100.000Xenopus_tropicalis
ENSMGAG00000005408PABPC410092.208ENSXCOG00000013190pabpc49692.925Xiphophorus_couchianus
ENSMGAG00000005408PABPC410082.264ENSXMAG00000019007pabpc49882.939Xiphophorus_maculatus

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