EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000005438 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 6883 bases
Position: chr19:6090571-6097453
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000005346	zf-C2H2	PF00096.26	1e-11	1	2
ENSMGAP00000005346	zf-C2H2	PF00096.26	1e-11	2	2
ENSMGAP00000005346	zf-met	PF12874.7	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000006079	PRDM12-201	1053	-	ENSMGAP00000005346	351 (aa)	-	G1N1G5

Gene Model

Click here to download ENSMGAG00000005438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000005438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000005438	PRDM12	63	40.789	ENSMGAG00000010710	PRDM5	91	40.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000005438	PRDM12	94	92.814	ENSG00000130711	PRDM12	93	92.669	Homo_sapiens
ENSMGAG00000005438	PRDM12	91	81.449	ENSAPOG00000016051	prdm12b	94	79.006	Acanthochromis_polyacanthus
ENSMGAG00000005438	PRDM12	98	68.023	ENSAPOG00000018234	-	98	67.967	Acanthochromis_polyacanthus
ENSMGAG00000005438	PRDM12	91	91.641	ENSAMEG00000016234	PRDM12	99	91.641	Ailuropoda_melanoleuca
ENSMGAG00000005438	PRDM12	98	78.820	ENSACIG00000005193	-	98	78.820	Amphilophus_citrinellus
ENSMGAG00000005438	PRDM12	98	78.378	ENSACIG00000019578	prdm12b	98	78.649	Amphilophus_citrinellus
ENSMGAG00000005438	PRDM12	91	82.698	ENSAOCG00000015040	prdm12b	94	79.888	Amphiprion_ocellaris
ENSMGAG00000005438	PRDM12	91	83.432	ENSAPEG00000015092	prdm12b	94	80.563	Amphiprion_percula
ENSMGAG00000005438	PRDM12	98	73.475	ENSAPEG00000022849	-	98	74.536	Amphiprion_percula
ENSMGAG00000005438	PRDM12	95	82.647	ENSATEG00000014595	-	99	82.647	Anabas_testudineus
ENSMGAG00000005438	PRDM12	96	92.941	ENSANAG00000020616	PRDM12	100	92.941	Aotus_nancymaae
ENSMGAG00000005438	PRDM12	98	75.515	ENSACLG00000007631	-	98	77.062	Astatotilapia_calliptera
ENSMGAG00000005438	PRDM12	98	80.618	ENSACLG00000011876	prdm12b	98	80.618	Astatotilapia_calliptera
ENSMGAG00000005438	PRDM12	99	80.726	ENSAMXG00000008540	PRDM12	100	80.726	Astyanax_mexicanus
ENSMGAG00000005438	PRDM12	98	83.516	ENSAMXG00000033665	prdm12b	98	85.440	Astyanax_mexicanus
ENSMGAG00000005438	PRDM12	94	93.413	ENSBTAG00000023797	PRDM12	98	90.704	Bos_taurus
ENSMGAG00000005438	PRDM12	94	93.114	ENSCJAG00000020540	PRDM12	98	90.678	Callithrix_jacchus
ENSMGAG00000005438	PRDM12	82	93.471	ENSCAFG00000023076	PRDM12	93	93.289	Canis_familiaris
ENSMGAG00000005438	PRDM12	94	93.713	ENSCAFG00020024046	PRDM12	94	93.548	Canis_lupus_dingo
ENSMGAG00000005438	PRDM12	94	93.713	ENSCHIG00000025005	PRDM12	98	90.730	Capra_hircus
ENSMGAG00000005438	PRDM12	88	92.971	ENSCPOG00000005901	PRDM12	95	92.971	Cavia_porcellus
ENSMGAG00000005438	PRDM12	94	93.114	ENSCCAG00000037485	PRDM12	98	89.916	Cebus_capucinus
ENSMGAG00000005438	PRDM12	94	93.114	ENSCATG00000020327	PRDM12	98	89.916	Cercocebus_atys
ENSMGAG00000005438	PRDM12	94	92.515	ENSCLAG00000005499	PRDM12	92	92.515	Chinchilla_lanigera
ENSMGAG00000005438	PRDM12	94	93.114	ENSCSAG00000014756	PRDM12	94	92.962	Chlorocebus_sabaeus
ENSMGAG00000005438	PRDM12	98	96.839	ENSCPBG00000022628	PRDM12	98	96.839	Chrysemys_picta_bellii
ENSMGAG00000005438	PRDM12	94	93.114	ENSCGRG00001015005	Prdm12	93	92.962	Cricetulus_griseus_chok1gshd
ENSMGAG00000005438	PRDM12	91	85.030	ENSCVAG00000017166	prdm12b	98	80.274	Cyprinodon_variegatus
ENSMGAG00000005438	PRDM12	98	75.000	ENSCVAG00000000944	-	98	75.781	Cyprinodon_variegatus
ENSMGAG00000005438	PRDM12	98	86.111	ENSDARG00000007430	prdm12b	98	86.111	Danio_rerio
ENSMGAG00000005438	PRDM12	94	92.814	ENSDNOG00000042302	PRDM12	96	91.908	Dasypus_novemcinctus
ENSMGAG00000005438	PRDM12	87	65.179	ENSEBUG00000016780	prdm12b	75	66.667	Eptatretus_burgeri
ENSMGAG00000005438	PRDM12	96	93.235	ENSEASG00005008472	PRDM12	98	90.449	Equus_asinus_asinus
ENSMGAG00000005438	PRDM12	96	92.941	ENSECAG00000005933	PRDM12	98	90.169	Equus_caballus
ENSMGAG00000005438	PRDM12	98	83.516	ENSELUG00000009905	prdm12b	98	83.516	Esox_lucius
ENSMGAG00000005438	PRDM12	98	80.692	ENSELUG00000013674	PRDM12	96	80.692	Esox_lucius
ENSMGAG00000005438	PRDM12	94	93.713	ENSFCAG00000043086	PRDM12	98	90.476	Felis_catus
ENSMGAG00000005438	PRDM12	98	100.000	ENSFALG00000001445	PRDM12	88	100.000	Ficedula_albicollis
ENSMGAG00000005438	PRDM12	91	84.273	ENSFHEG00000003944	prdm12b	95	81.921	Fundulus_heteroclitus
ENSMGAG00000005438	PRDM12	98	77.690	ENSFHEG00000007746	-	98	77.690	Fundulus_heteroclitus
ENSMGAG00000005438	PRDM12	94	84.084	ENSGMOG00000011797	prdm12b	96	83.041	Gadus_morhua
ENSMGAG00000005438	PRDM12	98	100.000	ENSGALG00000003895	PRDM12	98	100.000	Gallus_gallus
ENSMGAG00000005438	PRDM12	92	85.672	ENSGAFG00000010827	prdm12b	94	82.353	Gambusia_affinis
ENSMGAG00000005438	PRDM12	96	81.897	ENSGACG00000016713	prdm12b	94	81.897	Gasterosteus_aculeatus
ENSMGAG00000005438	PRDM12	98	97.126	ENSGAGG00000014083	PRDM12	98	97.126	Gopherus_agassizii
ENSMGAG00000005438	PRDM12	94	92.515	ENSGGOG00000010568	PRDM12	93	92.375	Gorilla_gorilla
ENSMGAG00000005438	PRDM12	98	75.515	ENSHBUG00000022537	-	91	77.062	Haplochromis_burtoni
ENSMGAG00000005438	PRDM12	98	79.348	ENSHBUG00000022878	prdm12b	98	79.348	Haplochromis_burtoni
ENSMGAG00000005438	PRDM12	94	91.916	ENSHGLG00000013939	PRDM12	93	91.789	Heterocephalus_glaber_female
ENSMGAG00000005438	PRDM12	91	80.702	ENSHCOG00000003663	prdm12b	94	77.384	Hippocampus_comes
ENSMGAG00000005438	PRDM12	98	75.070	ENSHCOG00000021167	-	98	75.070	Hippocampus_comes
ENSMGAG00000005438	PRDM12	98	84.530	ENSIPUG00000017053	prdm12b	98	85.083	Ictalurus_punctatus
ENSMGAG00000005438	PRDM12	99	78.393	ENSIPUG00000019544	PRDM12	100	78.393	Ictalurus_punctatus
ENSMGAG00000005438	PRDM12	95	93.491	ENSSTOG00000005986	PRDM12	88	93.491	Ictidomys_tridecemlineatus
ENSMGAG00000005438	PRDM12	93	93.333	ENSJJAG00000005424	Prdm12	100	93.333	Jaculus_jaculus
ENSMGAG00000005438	PRDM12	92	83.133	ENSKMAG00000021205	-	97	80.912	Kryptolebias_marmoratus
ENSMGAG00000005438	PRDM12	91	79.887	ENSKMAG00000016921	prdm12b	91	77.568	Kryptolebias_marmoratus
ENSMGAG00000005438	PRDM12	91	84.384	ENSLBEG00000017769	prdm12b	95	80.168	Labrus_bergylta
ENSMGAG00000005438	PRDM12	98	77.540	ENSLBEG00000007776	-	98	78.075	Labrus_bergylta
ENSMGAG00000005438	PRDM12	98	92.219	ENSLACG00000017560	PRDM12	98	92.219	Latimeria_chalumnae
ENSMGAG00000005438	PRDM12	98	87.395	ENSLOCG00000005429	prdm12b	98	87.675	Lepisosteus_oculatus
ENSMGAG00000005438	PRDM12	94	92.059	ENSLAFG00000006979	PRDM12	93	91.931	Loxodonta_africana
ENSMGAG00000005438	PRDM12	94	93.114	ENSMFAG00000040322	PRDM12	93	92.962	Macaca_fascicularis
ENSMGAG00000005438	PRDM12	94	93.114	ENSMNEG00000037234	PRDM12	98	89.916	Macaca_nemestrina
ENSMGAG00000005438	PRDM12	98	75.916	ENSMAMG00000018988	-	98	76.702	Mastacembelus_armatus
ENSMGAG00000005438	PRDM12	91	84.226	ENSMAMG00000013212	prdm12b	98	79.076	Mastacembelus_armatus
ENSMGAG00000005438	PRDM12	98	75.128	ENSMZEG00005000415	PRDM12	98	76.667	Maylandia_zebra
ENSMGAG00000005438	PRDM12	96	92.962	ENSMAUG00000013040	Prdm12	93	92.962	Mesocricetus_auratus
ENSMGAG00000005438	PRDM12	96	93.255	ENSMICG00000015480	PRDM12	98	90.730	Microcebus_murinus
ENSMGAG00000005438	PRDM12	98	92.486	ENSMOCG00000021026	Prdm12	93	93.255	Microtus_ochrogaster
ENSMGAG00000005438	PRDM12	99	95.989	ENSMODG00000012108	PRDM12	98	95.989	Monodelphis_domestica
ENSMGAG00000005438	PRDM12	98	67.956	ENSMALG00000021901	prdm12b	98	67.956	Monopterus_albus
ENSMGAG00000005438	PRDM12	94	92.814	MGP_CAROLIEiJ_G0023414	Prdm12	93	92.669	Mus_caroli
ENSMGAG00000005438	PRDM12	94	92.814	ENSMUSG00000079466	Prdm12	93	92.669	Mus_musculus
ENSMGAG00000005438	PRDM12	94	92.814	MGP_PahariEiJ_G0024871	Prdm12	93	92.669	Mus_pahari
ENSMGAG00000005438	PRDM12	94	92.814	MGP_SPRETEiJ_G0024331	Prdm12	93	92.669	Mus_spretus
ENSMGAG00000005438	PRDM12	92	93.272	ENSNGAG00000018480	Prdm12	97	90.173	Nannospalax_galili
ENSMGAG00000005438	PRDM12	98	78.437	ENSNBRG00000006727	prdm12b	98	78.706	Neolamprologus_brichardi
ENSMGAG00000005438	PRDM12	98	76.536	ENSNBRG00000024312	-	98	76.816	Neolamprologus_brichardi
ENSMGAG00000005438	PRDM12	99	85.100	ENSMEUG00000003828	PRDM12	98	85.100	Notamacropus_eugenii
ENSMGAG00000005438	PRDM12	93	92.727	ENSOPRG00000008680	PRDM12	100	92.727	Ochotona_princeps
ENSMGAG00000005438	PRDM12	96	92.669	ENSODEG00000016282	PRDM12	64	92.669	Octodon_degus
ENSMGAG00000005438	PRDM12	60	96.209	ENSOANG00000001043	PRDM12	97	96.209	Ornithorhynchus_anatinus
ENSMGAG00000005438	PRDM12	88	88.498	ENSOCUG00000008241	PRDM12	100	88.498	Oryctolagus_cuniculus
ENSMGAG00000005438	PRDM12	98	73.698	ENSORLG00000017558	-	98	75.521	Oryzias_latipes
ENSMGAG00000005438	PRDM12	98	78.142	ENSORLG00000007114	prdm12b	97	78.415	Oryzias_latipes
ENSMGAG00000005438	PRDM12	98	73.506	ENSORLG00020013167	-	98	75.325	Oryzias_latipes_hni
ENSMGAG00000005438	PRDM12	92	81.871	ENSORLG00020019565	prdm12b	97	78.591	Oryzias_latipes_hni
ENSMGAG00000005438	PRDM12	92	82.164	ENSORLG00015007621	prdm12b	96	78.788	Oryzias_latipes_hsok
ENSMGAG00000005438	PRDM12	98	74.219	ENSORLG00015003435	-	98	76.042	Oryzias_latipes_hsok
ENSMGAG00000005438	PRDM12	98	77.898	ENSOMEG00000007762	-	98	78.167	Oryzias_melastigma
ENSMGAG00000005438	PRDM12	95	79.437	ENSOMEG00000004134	prdm12b	97	78.495	Oryzias_melastigma
ENSMGAG00000005438	PRDM12	94	93.694	ENSOGAG00000007557	PRDM12	100	93.694	Otolemur_garnettii
ENSMGAG00000005438	PRDM12	83	90.444	ENSPPAG00000031506	-	99	90.444	Pan_paniscus
ENSMGAG00000005438	PRDM12	98	83.807	ENSPPRG00000023024	PRDM12	90	83.807	Panthera_pardus
ENSMGAG00000005438	PRDM12	94	92.814	ENSPTRG00000043324	-	93	92.669	Pan_troglodytes
ENSMGAG00000005438	PRDM12	94	92.814	ENSPTRG00000021475	PRDM12	93	92.669	Pan_troglodytes
ENSMGAG00000005438	PRDM12	94	93.114	ENSPANG00000025967	PRDM12	98	89.916	Papio_anubis
ENSMGAG00000005438	PRDM12	97	77.684	ENSPKIG00000004305	PRDM12	99	78.063	Paramormyrops_kingsleyae
ENSMGAG00000005438	PRDM12	98	84.699	ENSPKIG00000007228	prdm12b	98	84.973	Paramormyrops_kingsleyae
ENSMGAG00000005438	PRDM12	98	96.264	ENSPSIG00000006739	PRDM12	98	96.264	Pelodiscus_sinensis
ENSMGAG00000005438	PRDM12	92	85.152	ENSPMGG00000008867	prdm12b	98	79.558	Periophthalmus_magnuspinnatus
ENSMGAG00000005438	PRDM12	93	81.845	ENSPMGG00000002356	-	98	75.597	Periophthalmus_magnuspinnatus
ENSMGAG00000005438	PRDM12	94	93.072	ENSPEMG00000009969	Prdm12	96	89.205	Peromyscus_maniculatus_bairdii
ENSMGAG00000005438	PRDM12	99	95.989	ENSPCIG00000024119	PRDM12	98	95.989	Phascolarctos_cinereus
ENSMGAG00000005438	PRDM12	98	81.564	ENSPFOG00000019841	prdm12b	96	81.564	Poecilia_formosa
ENSMGAG00000005438	PRDM12	92	85.970	ENSPLAG00000016626	prdm12b	96	81.319	Poecilia_latipinna
ENSMGAG00000005438	PRDM12	89	85.538	ENSPMEG00000016698	prdm12b	94	81.429	Poecilia_mexicana
ENSMGAG00000005438	PRDM12	93	78.402	ENSPREG00000003211	-	92	78.402	Poecilia_reticulata
ENSMGAG00000005438	PRDM12	92	85.970	ENSPREG00000015073	prdm12b	93	82.353	Poecilia_reticulata
ENSMGAG00000005438	PRDM12	97	91.570	ENSPPYG00000019694	PRDM12	98	91.570	Pongo_abelii
ENSMGAG00000005438	PRDM12	94	93.713	ENSPCOG00000022255	PRDM12	93	93.567	Propithecus_coquereli
ENSMGAG00000005438	PRDM12	94	93.413	ENSPVAG00000001511	PRDM12	95	92.486	Pteropus_vampyrus
ENSMGAG00000005438	PRDM12	98	75.128	ENSPNYG00000013589	-	98	76.667	Pundamilia_nyererei
ENSMGAG00000005438	PRDM12	98	78.649	ENSPNYG00000009607	prdm12b	98	78.649	Pundamilia_nyererei
ENSMGAG00000005438	PRDM12	92	82.229	ENSPNAG00000013396	PRDM12	93	80.115	Pygocentrus_nattereri
ENSMGAG00000005438	PRDM12	98	84.807	ENSPNAG00000024532	prdm12b	98	86.464	Pygocentrus_nattereri
ENSMGAG00000005438	PRDM12	94	92.814	ENSRNOG00000009218	Prdm12	93	92.669	Rattus_norvegicus
ENSMGAG00000005438	PRDM12	89	93.375	ENSRBIG00000042712	PRDM12	98	86.275	Rhinopithecus_bieti
ENSMGAG00000005438	PRDM12	91	93.458	ENSRROG00000043554	PRDM12	100	93.458	Rhinopithecus_roxellana
ENSMGAG00000005438	PRDM12	99	95.143	ENSSHAG00000015972	PRDM12	98	95.143	Sarcophilus_harrisii
ENSMGAG00000005438	PRDM12	91	81.268	ENSSMAG00000003754	prdm12b	95	77.748	Scophthalmus_maximus
ENSMGAG00000005438	PRDM12	98	77.513	ENSSDUG00000023498	prdm12b	98	77.513	Seriola_dumerili
ENSMGAG00000005438	PRDM12	96	82.647	ENSSDUG00000019071	-	95	82.647	Seriola_dumerili
ENSMGAG00000005438	PRDM12	98	83.381	ENSSLDG00000013562	-	98	83.381	Seriola_lalandi_dorsalis
ENSMGAG00000005438	PRDM12	98	77.600	ENSSLDG00000009557	prdm12b	98	77.600	Seriola_lalandi_dorsalis
ENSMGAG00000005438	PRDM12	98	96.264	ENSSPUG00000013424	PRDM12	98	96.264	Sphenodon_punctatus
ENSMGAG00000005438	PRDM12	98	68.700	ENSSPAG00000022420	-	98	71.625	Stegastes_partitus
ENSMGAG00000005438	PRDM12	91	82.164	ENSSPAG00000018824	prdm12b	94	79.666	Stegastes_partitus
ENSMGAG00000005438	PRDM12	94	93.713	ENSSSCG00000005703	PRDM12	94	93.548	Sus_scrofa
ENSMGAG00000005438	PRDM12	98	79.437	ENSTRUG00000013239	-	98	79.437	Takifugu_rubripes
ENSMGAG00000005438	PRDM12	98	78.846	ENSTRUG00000018659	prdm12b	98	79.121	Takifugu_rubripes
ENSMGAG00000005438	PRDM12	98	78.022	ENSTNIG00000009020	prdm12b	96	79.718	Tetraodon_nigroviridis
ENSMGAG00000005438	PRDM12	98	77.841	ENSTNIG00000005859	-	98	77.841	Tetraodon_nigroviridis
ENSMGAG00000005438	PRDM12	94	93.713	ENSUAMG00000009653	PRDM12	94	92.962	Ursus_americanus
ENSMGAG00000005438	PRDM12	94	93.675	ENSVVUG00000027662	PRDM12	79	93.675	Vulpes_vulpes
ENSMGAG00000005438	PRDM12	92	85.672	ENSXCOG00000002836	prdm12b	97	81.267	Xiphophorus_couchianus
ENSMGAG00000005438	PRDM12	91	85.329	ENSXMAG00000005537	prdm12b	97	80.939	Xiphophorus_maculatus
ENSMGAG00000005438	PRDM12	98	76.190	ENSXMAG00000028012	-	98	76.984	Xiphophorus_maculatus