EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000006054 (Gene tree)
Gene ID: 100544208
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 4985 bases
Position: chr28:4421121-4426105
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000006033	zf-U1	PF06220.12	6.2e-23	1	1
ENSMGAP00000019126	zf-U1	PF06220.12	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000006779	SNRPC-202	708	-	ENSMGAP00000006033	158 (aa)	-	G1N2Y2
ENSMGAT00000018809	SNRPC-201	777	-	ENSMGAP00000019126	181 (aa)	-	G3UTP3

Gene Model

Click here to download ENSMGAG00000006054's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000006054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000006054	SNRPC	100	96.855	ENSG00000124562	SNRPC	100	96.855	Homo_sapiens
ENSMGAG00000006054	SNRPC	100	94.969	ENSAMEG00000000963	SNRPC	100	85.246	Ailuropoda_melanoleuca
ENSMGAG00000006054	SNRPC	99	96.178	ENSACAG00000015721	SNRPC	87	96.178	Anolis_carolinensis
ENSMGAG00000006054	SNRPC	100	69.182	ENSANAG00000021444	-	59	75.269	Aotus_nancymaae
ENSMGAG00000006054	SNRPC	100	96.855	ENSANAG00000019696	-	100	96.855	Aotus_nancymaae
ENSMGAG00000006054	SNRPC	100	84.277	ENSANAG00000021026	-	100	75.472	Aotus_nancymaae
ENSMGAG00000006054	SNRPC	100	96.226	ENSANAG00000007843	-	100	96.226	Aotus_nancymaae
ENSMGAG00000006054	SNRPC	100	92.453	ENSANAG00000019157	-	100	89.937	Aotus_nancymaae
ENSMGAG00000006054	SNRPC	100	86.164	ENSANAG00000019726	-	92	84.277	Aotus_nancymaae
ENSMGAG00000006054	SNRPC	99	85.443	ENSANAG00000020588	-	92	87.342	Aotus_nancymaae
ENSMGAG00000006054	SNRPC	100	83.648	ENSAMXG00000032641	snrpc	100	72.785	Astyanax_mexicanus
ENSMGAG00000006054	SNRPC	100	96.855	ENSBTAG00000024549	SNRPC	100	96.855	Bos_taurus
ENSMGAG00000006054	SNRPC	100	96.855	ENSCJAG00000015321	-	100	96.855	Callithrix_jacchus
ENSMGAG00000006054	SNRPC	100	94.340	ENSCJAG00000041822	-	100	91.824	Callithrix_jacchus
ENSMGAG00000006054	SNRPC	100	95.597	ENSCJAG00000043055	-	100	95.597	Callithrix_jacchus
ENSMGAG00000006054	SNRPC	100	92.453	ENSCAFG00000031775	-	100	89.937	Canis_familiaris
ENSMGAG00000006054	SNRPC	100	95.625	ENSCAFG00000028988	-	100	95.625	Canis_familiaris
ENSMGAG00000006054	SNRPC	100	76.730	ENSCAFG00000025525	-	100	75.472	Canis_familiaris
ENSMGAG00000006054	SNRPC	74	96.610	ENSCAFG00000001231	-	93	96.610	Canis_familiaris
ENSMGAG00000006054	SNRPC	100	92.453	ENSCAFG00020017383	-	100	89.937	Canis_lupus_dingo
ENSMGAG00000006054	SNRPC	99	85.350	ENSCAFG00020009944	-	90	82.803	Canis_lupus_dingo
ENSMGAG00000006054	SNRPC	100	93.082	ENSCAFG00020005758	-	99	91.083	Canis_lupus_dingo
ENSMGAG00000006054	SNRPC	100	96.855	ENSCAFG00020005945	-	100	96.855	Canis_lupus_dingo
ENSMGAG00000006054	SNRPC	100	86.517	ENSCAFG00020026577	-	100	86.517	Canis_lupus_dingo
ENSMGAG00000006054	SNRPC	100	70.886	ENSCHIG00000005039	-	100	69.620	Capra_hircus
ENSMGAG00000006054	SNRPC	100	96.226	ENSCHIG00000012087	-	100	96.226	Capra_hircus
ENSMGAG00000006054	SNRPC	100	96.855	ENSTSYG00000011216	-	100	96.855	Carlito_syrichta
ENSMGAG00000006054	SNRPC	99	86.076	ENSTSYG00000029745	-	62	88.618	Carlito_syrichta
ENSMGAG00000006054	SNRPC	100	76.582	ENSTSYG00000025721	-	100	73.418	Carlito_syrichta
ENSMGAG00000006054	SNRPC	89	96.479	ENSCAPG00000005161	SNRPC	100	96.479	Cavia_aperea
ENSMGAG00000006054	SNRPC	100	96.855	ENSCPOG00000008563	SNRPC	100	96.855	Cavia_porcellus
ENSMGAG00000006054	SNRPC	99	80.128	ENSCCAG00000026624	-	66	74.359	Cebus_capucinus
ENSMGAG00000006054	SNRPC	100	67.925	ENSCCAG00000028293	-	58	84.211	Cebus_capucinus
ENSMGAG00000006054	SNRPC	100	91.195	ENSCCAG00000036059	-	89	88.679	Cebus_capucinus
ENSMGAG00000006054	SNRPC	98	76.923	ENSCCAG00000022209	-	97	74.214	Cebus_capucinus
ENSMGAG00000006054	SNRPC	98	84.615	ENSCCAG00000022751	-	99	82.822	Cebus_capucinus
ENSMGAG00000006054	SNRPC	100	96.855	ENSCATG00000035787	SNRPC	100	96.855	Cercocebus_atys
ENSMGAG00000006054	SNRPC	100	96.855	ENSCLAG00000016920	SNRPC	100	96.855	Chinchilla_lanigera
ENSMGAG00000006054	SNRPC	99	78.981	ENSCLAG00000010242	-	96	77.070	Chinchilla_lanigera
ENSMGAG00000006054	SNRPC	100	86.517	ENSCSAG00000009821	SNRPC	100	86.517	Chlorocebus_sabaeus
ENSMGAG00000006054	SNRPC	100	80.503	ENSCHOG00000011439	SNRPC	88	78.344	Choloepus_hoffmanni
ENSMGAG00000006054	SNRPC	100	96.226	ENSCPBG00000027142	SNRPC	100	96.226	Chrysemys_picta_bellii
ENSMGAG00000006054	SNRPC	100	96.855	ENSCANG00000028035	SNRPC	100	96.855	Colobus_angolensis_palliatus
ENSMGAG00000006054	SNRPC	100	86.076	ENSCGRG00001021483	-	100	84.177	Cricetulus_griseus_chok1gshd
ENSMGAG00000006054	SNRPC	100	96.226	ENSCGRG00001009011	-	100	96.226	Cricetulus_griseus_chok1gshd
ENSMGAG00000006054	SNRPC	100	94.340	ENSCGRG00000005005	Snrpc	98	96.154	Cricetulus_griseus_crigri
ENSMGAG00000006054	SNRPC	100	83.648	ENSDARG00000009871	snrpc	100	76.875	Danio_rerio
ENSMGAG00000006054	SNRPC	100	96.226	ENSDNOG00000034699	-	99	96.226	Dasypus_novemcinctus
ENSMGAG00000006054	SNRPC	75	95.798	ENSDNOG00000042403	-	94	95.798	Dasypus_novemcinctus
ENSMGAG00000006054	SNRPC	100	77.987	ENSDORG00000005955	Snrpc	66	74.522	Dipodomys_ordii
ENSMGAG00000006054	SNRPC	98	89.103	ENSETEG00000011265	-	100	86.538	Echinops_telfairi
ENSMGAG00000006054	SNRPC	52	90.361	ENSETEG00000008756	-	57	96.552	Echinops_telfairi
ENSMGAG00000006054	SNRPC	98	92.949	ENSETEG00000008268	-	100	92.949	Echinops_telfairi
ENSMGAG00000006054	SNRPC	100	96.855	ENSEASG00005021007	SNRPC	100	96.855	Equus_asinus_asinus
ENSMGAG00000006054	SNRPC	100	96.855	ENSECAG00000026848	SNRPC	100	96.855	Equus_caballus
ENSMGAG00000006054	SNRPC	99	79.114	ENSEEUG00000014633	SNRPC	90	78.481	Erinaceus_europaeus
ENSMGAG00000006054	SNRPC	100	89.937	ENSFCAG00000031775	-	88	87.421	Felis_catus
ENSMGAG00000006054	SNRPC	100	96.855	ENSFCAG00000044077	-	100	96.855	Felis_catus
ENSMGAG00000006054	SNRPC	100	98.113	ENSFALG00000003756	SNRPC	100	98.113	Ficedula_albicollis
ENSMGAG00000006054	SNRPC	100	96.855	ENSFDAG00000018111	SNRPC	100	96.855	Fukomys_damarensis
ENSMGAG00000006054	SNRPC	100	97.500	ENSGALG00000002773	SNRPC	100	97.500	Gallus_gallus
ENSMGAG00000006054	SNRPC	100	96.226	ENSGAGG00000003063	SNRPC	100	96.226	Gopherus_agassizii
ENSMGAG00000006054	SNRPC	100	96.855	ENSGGOG00000012499	SNRPC	100	96.855	Gorilla_gorilla
ENSMGAG00000006054	SNRPC	100	79.245	ENSHGLG00000017741	-	100	80.380	Heterocephalus_glaber_female
ENSMGAG00000006054	SNRPC	81	72.093	ENSHGLG00000005871	-	100	72.327	Heterocephalus_glaber_female
ENSMGAG00000006054	SNRPC	100	96.855	ENSHGLG00000013981	SNRPC	100	96.855	Heterocephalus_glaber_female
ENSMGAG00000006054	SNRPC	100	96.855	ENSHGLG00100009478	SNRPC	100	96.855	Heterocephalus_glaber_male
ENSMGAG00000006054	SNRPC	100	91.824	ENSHGLG00100017764	-	100	90.566	Heterocephalus_glaber_male
ENSMGAG00000006054	SNRPC	100	79.245	ENSHGLG00100010786	-	100	80.380	Heterocephalus_glaber_male
ENSMGAG00000006054	SNRPC	100	84.277	ENSIPUG00000024851	snrpc	100	81.761	Ictalurus_punctatus
ENSMGAG00000006054	SNRPC	100	96.855	ENSSTOG00000013786	SNRPC	100	96.855	Ictidomys_tridecemlineatus
ENSMGAG00000006054	SNRPC	100	96.226	ENSJJAG00000021741	Snrpc	100	96.226	Jaculus_jaculus
ENSMGAG00000006054	SNRPC	100	85.625	ENSLACG00000013753	SNRPC	88	86.709	Latimeria_chalumnae
ENSMGAG00000006054	SNRPC	100	96.855	ENSLAFG00000013534	SNRPC	100	96.855	Loxodonta_africana
ENSMGAG00000006054	SNRPC	100	96.226	ENSMFAG00000030525	-	100	96.226	Macaca_fascicularis
ENSMGAG00000006054	SNRPC	100	96.855	ENSMFAG00000031764	-	100	96.855	Macaca_fascicularis
ENSMGAG00000006054	SNRPC	100	95.597	ENSMMUG00000039415	-	100	95.597	Macaca_mulatta
ENSMGAG00000006054	SNRPC	100	86.792	ENSMMUG00000045425	-	100	86.792	Macaca_mulatta
ENSMGAG00000006054	SNRPC	100	95.597	ENSMMUG00000000869	-	97	95.597	Macaca_mulatta
ENSMGAG00000006054	SNRPC	100	96.855	ENSMNEG00000032731	SNRPC	100	96.855	Macaca_nemestrina
ENSMGAG00000006054	SNRPC	97	69.481	ENSMLEG00000039724	-	81	66.883	Mandrillus_leucophaeus
ENSMGAG00000006054	SNRPC	100	96.855	ENSMLEG00000033916	-	100	96.855	Mandrillus_leucophaeus
ENSMGAG00000006054	SNRPC	97	88.387	ENSMLEG00000040224	-	89	88.387	Mandrillus_leucophaeus
ENSMGAG00000006054	SNRPC	100	96.226	ENSMICG00000032183	-	100	96.226	Microcebus_murinus
ENSMGAG00000006054	SNRPC	100	81.761	ENSMICG00000036552	-	87	74.359	Microcebus_murinus
ENSMGAG00000006054	SNRPC	100	84.906	ENSMICG00000009130	-	100	83.019	Microcebus_murinus
ENSMGAG00000006054	SNRPC	100	96.226	ENSMICG00000007339	-	100	96.226	Microcebus_murinus
ENSMGAG00000006054	SNRPC	100	96.226	ENSMOCG00000017609	Snrpc	100	96.226	Microtus_ochrogaster
ENSMGAG00000006054	SNRPC	100	96.855	ENSMODG00000013904	-	100	96.855	Monodelphis_domestica
ENSMGAG00000006054	SNRPC	100	96.226	MGP_CAROLIEiJ_G0021308	Snrpc	100	96.226	Mus_caroli
ENSMGAG00000006054	SNRPC	100	96.226	ENSMUSG00000024217	Snrpc	100	96.226	Mus_musculus
ENSMGAG00000006054	SNRPC	74	95.763	MGP_SPRETEiJ_G0022221	-	98	95.763	Mus_spretus
ENSMGAG00000006054	SNRPC	100	94.969	ENSMPUG00000003210	SNRPC	98	96.795	Mustela_putorius_furo
ENSMGAG00000006054	SNRPC	100	94.969	ENSMLUG00000002488	SNRPC	98	96.795	Myotis_lucifugus
ENSMGAG00000006054	SNRPC	100	96.226	ENSNGAG00000019686	Snrpc	100	96.226	Nannospalax_galili
ENSMGAG00000006054	SNRPC	100	96.855	ENSNLEG00000034810	SNRPC	100	96.855	Nomascus_leucogenys
ENSMGAG00000006054	SNRPC	89	97.183	ENSMEUG00000009300	SNRPC	100	97.183	Notamacropus_eugenii
ENSMGAG00000006054	SNRPC	100	96.855	ENSODEG00000017080	-	100	96.855	Octodon_degus
ENSMGAG00000006054	SNRPC	100	95.597	ENSODEG00000019633	-	100	95.597	Octodon_degus
ENSMGAG00000006054	SNRPC	100	96.855	ENSODEG00000018985	-	100	96.855	Octodon_degus
ENSMGAG00000006054	SNRPC	100	96.855	ENSODEG00000020370	-	100	96.855	Octodon_degus
ENSMGAG00000006054	SNRPC	83	91.667	ENSODEG00000006008	-	95	88.636	Octodon_degus
ENSMGAG00000006054	SNRPC	100	96.226	ENSODEG00000020201	-	100	96.226	Octodon_degus
ENSMGAG00000006054	SNRPC	91	93.243	ENSOANG00000003405	SNRPC	100	93.243	Ornithorhynchus_anatinus
ENSMGAG00000006054	SNRPC	100	95.597	ENSOCUG00000026430	-	99	95.597	Oryctolagus_cuniculus
ENSMGAG00000006054	SNRPC	100	94.340	ENSOCUG00000023292	-	100	91.824	Oryctolagus_cuniculus
ENSMGAG00000006054	SNRPC	100	96.855	ENSOCUG00000026668	-	100	96.855	Oryctolagus_cuniculus
ENSMGAG00000006054	SNRPC	99	96.178	ENSOGAG00000008755	-	90	95.000	Otolemur_garnettii
ENSMGAG00000006054	SNRPC	97	82.468	ENSOGAG00000028405	-	99	78.431	Otolemur_garnettii
ENSMGAG00000006054	SNRPC	100	94.969	ENSOGAG00000026269	-	100	92.453	Otolemur_garnettii
ENSMGAG00000006054	SNRPC	100	96.855	ENSOARG00000010823	SNRPC	100	96.855	Ovis_aries
ENSMGAG00000006054	SNRPC	100	96.855	ENSPPAG00000043871	SNRPC	100	96.855	Pan_paniscus
ENSMGAG00000006054	SNRPC	96	58.442	ENSPPRG00000016017	-	86	54.545	Panthera_pardus
ENSMGAG00000006054	SNRPC	100	96.855	ENSPPRG00000008647	-	100	96.855	Panthera_pardus
ENSMGAG00000006054	SNRPC	100	96.855	ENSPTIG00000021867	-	100	96.855	Panthera_tigris_altaica
ENSMGAG00000006054	SNRPC	100	96.855	ENSPTRG00000018070	SNRPC	100	96.855	Pan_troglodytes
ENSMGAG00000006054	SNRPC	100	85.535	ENSPANG00000018228	-	94	85.535	Papio_anubis
ENSMGAG00000006054	SNRPC	100	96.855	ENSPANG00000022802	-	100	96.855	Papio_anubis
ENSMGAG00000006054	SNRPC	100	81.250	ENSPKIG00000001671	SNRPC	100	75.000	Paramormyrops_kingsleyae
ENSMGAG00000006054	SNRPC	99	96.178	ENSPSIG00000004876	SNRPC	92	84.492	Pelodiscus_sinensis
ENSMGAG00000006054	SNRPC	100	83.544	ENSPEMG00000002763	-	100	82.911	Peromyscus_maniculatus_bairdii
ENSMGAG00000006054	SNRPC	100	96.226	ENSPEMG00000010773	Snrpc	100	96.226	Peromyscus_maniculatus_bairdii
ENSMGAG00000006054	SNRPC	52	95.181	ENSPPYG00000029902	-	84	95.181	Pongo_abelii
ENSMGAG00000006054	SNRPC	99	96.178	ENSPCAG00000016885	SNRPC	100	89.143	Procavia_capensis
ENSMGAG00000006054	SNRPC	100	96.855	ENSPCOG00000004904	SNRPC	100	96.855	Propithecus_coquereli
ENSMGAG00000006054	SNRPC	99	95.541	ENSPVAG00000015597	SNRPC	87	95.541	Pteropus_vampyrus
ENSMGAG00000006054	SNRPC	100	96.226	ENSRNOG00000000493	Snrpc	100	96.226	Rattus_norvegicus
ENSMGAG00000006054	SNRPC	100	96.226	ENSRBIG00000014819	-	100	96.226	Rhinopithecus_bieti
ENSMGAG00000006054	SNRPC	100	96.855	ENSRBIG00000037567	-	100	96.855	Rhinopithecus_bieti
ENSMGAG00000006054	SNRPC	100	96.226	ENSRBIG00000022998	-	100	96.226	Rhinopithecus_bieti
ENSMGAG00000006054	SNRPC	100	86.164	ENSRBIG00000036353	-	90	79.885	Rhinopithecus_bieti
ENSMGAG00000006054	SNRPC	100	96.855	ENSRROG00000041300	SNRPC	100	96.855	Rhinopithecus_roxellana
ENSMGAG00000006054	SNRPC	98	80.128	ENSSBOG00000023189	-	91	80.128	Saimiri_boliviensis_boliviensis
ENSMGAG00000006054	SNRPC	95	75.497	ENSSBOG00000032361	-	75	77.869	Saimiri_boliviensis_boliviensis
ENSMGAG00000006054	SNRPC	100	96.855	ENSSBOG00000031528	-	100	96.855	Saimiri_boliviensis_boliviensis
ENSMGAG00000006054	SNRPC	99	96.815	ENSSHAG00000000945	-	99	88.889	Sarcophilus_harrisii
ENSMGAG00000006054	SNRPC	65	84.466	ENSSFOG00015022422	snrpc	77	80.992	Scleropages_formosus
ENSMGAG00000006054	SNRPC	100	78.616	ENSSFOG00015019150	snrpc	100	75.000	Scleropages_formosus
ENSMGAG00000006054	SNRPC	100	72.956	ENSSARG00000008970	SNRPC	94	67.647	Sorex_araneus
ENSMGAG00000006054	SNRPC	100	96.855	ENSSPUG00000002502	SNRPC	100	96.855	Sphenodon_punctatus
ENSMGAG00000006054	SNRPC	100	96.855	ENSSSCG00000001531	SNRPC	100	96.855	Sus_scrofa
ENSMGAG00000006054	SNRPC	100	96.855	ENSTGUG00000001773	SNRPC	100	96.855	Taeniopygia_guttata
ENSMGAG00000006054	SNRPC	98	89.103	ENSTBEG00000013022	-	100	86.538	Tupaia_belangeri
ENSMGAG00000006054	SNRPC	100	94.969	ENSTTRG00000007827	SNRPC	100	84.615	Tursiops_truncatus
ENSMGAG00000006054	SNRPC	75	95.798	ENSUAMG00000014125	SNRPC	80	95.798	Ursus_americanus
ENSMGAG00000006054	SNRPC	100	86.517	ENSUMAG00000010869	SNRPC	100	86.517	Ursus_maritimus
ENSMGAG00000006054	SNRPC	89	71.127	ENSVPAG00000003106	SNRPC	79	68.310	Vicugna_pacos
ENSMGAG00000006054	SNRPC	97	91.558	ENSVVUG00000010467	-	87	89.103	Vulpes_vulpes
ENSMGAG00000006054	SNRPC	100	95.597	ENSVVUG00000021947	-	100	95.597	Vulpes_vulpes
ENSMGAG00000006054	SNRPC	100	89.308	ENSXETG00000024721	snrpc	100	86.792	Xenopus_tropicalis