EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000006188 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 7465 bases
Position: chr10:13189984-13197448
Accession: 25512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000006181	PRP38	PF03371.15	7.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000006928	PRPF38B-201	1497	-	ENSMGAP00000006181	498 (aa)	-	G1N3A5

Gene Model

Click here to download ENSMGAG00000006188's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000006188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000006188	PRPF38B	100	89.157	ENSG00000134186	PRPF38B	100	86.697	Homo_sapiens
ENSMGAG00000006188	PRPF38B	100	87.550	ENSANAG00000028333	PRPF38B	91	86.747	Aotus_nancymaae
ENSMGAG00000006188	PRPF38B	100	86.345	ENSCGRG00001018841	Prpf38b	90	86.345	Cricetulus_griseus_chok1gshd
ENSMGAG00000006188	PRPF38B	91	85.055	ENSCGRG00000002972	Prpf38b	100	85.055	Cricetulus_griseus_crigri
ENSMGAG00000006188	PRPF38B	88	84.633	ENSDORG00000025236	-	100	83.716	Dipodomys_ordii
ENSMGAG00000006188	PRPF38B	100	87.550	ENSEEUG00000014328	PRPF38B	91	85.542	Erinaceus_europaeus
ENSMGAG00000006188	PRPF38B	100	87.751	ENSFDAG00000021009	PRPF38B	92	86.948	Fukomys_damarensis
ENSMGAG00000006188	PRPF38B	100	89.157	ENSGGOG00000011288	PRPF38B	91	88.353	Gorilla_gorilla
ENSMGAG00000006188	PRPF38B	100	85.542	ENSMAUG00000019131	Prpf38b	91	85.542	Mesocricetus_auratus
ENSMGAG00000006188	PRPF38B	100	85.542	MGP_CAROLIEiJ_G0025542	Prpf38b	91	87.149	Mus_caroli
ENSMGAG00000006188	PRPF38B	100	86.747	ENSMUSG00000027881	Prpf38b	91	86.747	Mus_musculus
ENSMGAG00000006188	PRPF38B	100	84.940	MGP_PahariEiJ_G0026988	Prpf38b	91	86.546	Mus_pahari
ENSMGAG00000006188	PRPF38B	100	85.141	MGP_SPRETEiJ_G0026492	Prpf38b	89	93.617	Mus_spretus
ENSMGAG00000006188	PRPF38B	100	88.353	ENSNLEG00000001645	-	91	87.550	Nomascus_leucogenys
ENSMGAG00000006188	PRPF38B	99	84.105	ENSNLEG00000030268	-	91	81.087	Nomascus_leucogenys
ENSMGAG00000006188	PRPF38B	100	89.157	ENSPPAG00000001260	PRPF38B	91	88.353	Pan_paniscus
ENSMGAG00000006188	PRPF38B	100	89.980	ENSPPRG00000002116	PRPF38B	91	89.178	Panthera_pardus
ENSMGAG00000006188	PRPF38B	100	89.157	ENSPTRG00000001032	PRPF38B	91	88.353	Pan_troglodytes
ENSMGAG00000006188	PRPF38B	100	88.755	ENSPANG00000007560	PRPF38B	91	87.952	Papio_anubis
ENSMGAG00000006188	PRPF38B	56	96.043	ENSPCIG00000024841	PRPF38B	90	87.751	Phascolarctos_cinereus
ENSMGAG00000006188	PRPF38B	100	88.554	ENSPVAG00000011929	-	91	87.751	Pteropus_vampyrus
ENSMGAG00000006188	PRPF38B	100	87.550	ENSSARG00000012818	-	90	86.747	Sorex_araneus
ENSMGAG00000006188	PRPF38B	84	96.172	ENSTGUG00000004594	-	89	96.172	Taeniopygia_guttata
ENSMGAG00000006188	PRPF38B	100	89.980	ENSUAMG00000023817	PRPF38B	91	89.178	Ursus_americanus