EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000006892 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 6062 bases
Position: chr10:11302432-11308493
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000006988	RTC	PF01137.21	1.3e-66	1	1
ENSMGAP00000006988	RTC_insert	PF05189.13	4.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000007753	RTCA-201	960	-	ENSMGAP00000006988	319 (aa)	-	G1N514

Gene Model

Click here to download ENSMGAG00000006892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000006892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000006892	RTCA	100	81.250	ENSG00000137996	RTCA	87	81.818	Homo_sapiens
ENSMGAG00000006892	RTCA	99	68.553	ENSAPOG00000001345	rtca	87	68.553	Acanthochromis_polyacanthus
ENSMGAG00000006892	RTCA	84	81.784	ENSAMEG00000008855	RTCA	100	81.784	Ailuropoda_melanoleuca
ENSMGAG00000006892	RTCA	99	67.296	ENSACIG00000019643	rtca	87	67.296	Amphilophus_citrinellus
ENSMGAG00000006892	RTCA	99	68.553	ENSAOCG00000014979	rtca	87	68.553	Amphiprion_ocellaris
ENSMGAG00000006892	RTCA	99	68.553	ENSAPEG00000006945	rtca	87	68.553	Amphiprion_percula
ENSMGAG00000006892	RTCA	99	67.925	ENSATEG00000006315	rtca	87	67.925	Anabas_testudineus
ENSMGAG00000006892	RTCA	99	97.170	ENSAPLG00000015430	RTCA	90	97.170	Anas_platyrhynchos
ENSMGAG00000006892	RTCA	99	80.878	ENSANAG00000025446	RTCA	87	80.878	Aotus_nancymaae
ENSMGAG00000006892	RTCA	99	67.925	ENSACLG00000020770	rtca	87	67.925	Astatotilapia_calliptera
ENSMGAG00000006892	RTCA	99	70.126	ENSAMXG00000043271	rtca	87	70.126	Astyanax_mexicanus
ENSMGAG00000006892	RTCA	99	82.759	ENSBTAG00000006321	RTCA	87	82.759	Bos_taurus
ENSMGAG00000006892	RTCA	99	81.191	ENSCJAG00000003398	RTCA	87	81.191	Callithrix_jacchus
ENSMGAG00000006892	RTCA	99	81.505	ENSCAFG00000020010	RTCA	59	81.505	Canis_familiaris
ENSMGAG00000006892	RTCA	99	81.505	ENSCAFG00020011528	RTCA	50	81.505	Canis_lupus_dingo
ENSMGAG00000006892	RTCA	99	82.759	ENSCHIG00000018937	RTCA	87	82.759	Capra_hircus
ENSMGAG00000006892	RTCA	99	80.878	ENSTSYG00000011305	RTCA	87	80.878	Carlito_syrichta
ENSMGAG00000006892	RTCA	99	80.564	ENSCCAG00000021844	RTCA	87	80.564	Cebus_capucinus
ENSMGAG00000006892	RTCA	100	80.938	ENSCATG00000019364	RTCA	100	80.906	Cercocebus_atys
ENSMGAG00000006892	RTCA	99	80.696	ENSCLAG00000006125	RTCA	100	80.696	Chinchilla_lanigera
ENSMGAG00000006892	RTCA	99	81.818	ENSCSAG00000001509	RTCA	87	81.818	Chlorocebus_sabaeus
ENSMGAG00000006892	RTCA	99	81.505	ENSCHOG00000005211	RTCA	87	81.505	Choloepus_hoffmanni
ENSMGAG00000006892	RTCA	99	88.050	ENSCPBG00000026658	RTCA	87	88.050	Chrysemys_picta_bellii
ENSMGAG00000006892	RTCA	99	52.516	ENSCING00000007875	-	87	52.516	Ciona_intestinalis
ENSMGAG00000006892	RTCA	99	52.201	ENSCSAVG00000007269	-	87	52.201	Ciona_savignyi
ENSMGAG00000006892	RTCA	100	80.938	ENSCANG00000040106	RTCA	87	81.505	Colobus_angolensis_palliatus
ENSMGAG00000006892	RTCA	84	80.669	ENSCGRG00001013163	Rtca	85	80.669	Cricetulus_griseus_chok1gshd
ENSMGAG00000006892	RTCA	99	66.038	ENSCSEG00000000530	rtca	85	66.038	Cynoglossus_semilaevis
ENSMGAG00000006892	RTCA	71	70.044	ENSCVAG00000021809	rtca	66	70.044	Cyprinodon_variegatus
ENSMGAG00000006892	RTCA	99	70.440	ENSDARG00000002215	rtca	87	70.440	Danio_rerio
ENSMGAG00000006892	RTCA	99	80.878	ENSDNOG00000000456	RTCA	87	80.878	Dasypus_novemcinctus
ENSMGAG00000006892	RTCA	99	82.132	ENSDORG00000005448	Rtca	87	82.132	Dipodomys_ordii
ENSMGAG00000006892	RTCA	99	35.238	FBgn0025630	Rtca	86	35.238	Drosophila_melanogaster
ENSMGAG00000006892	RTCA	94	55.150	ENSEBUG00000008556	rtca	81	55.150	Eptatretus_burgeri
ENSMGAG00000006892	RTCA	99	82.445	ENSEASG00005015926	RTCA	87	82.445	Equus_asinus_asinus
ENSMGAG00000006892	RTCA	99	82.445	ENSECAG00000019831	RTCA	87	82.445	Equus_caballus
ENSMGAG00000006892	RTCA	89	74.648	ENSEEUG00000001165	RTCA	82	74.648	Erinaceus_europaeus
ENSMGAG00000006892	RTCA	99	67.296	ENSELUG00000003741	rtca	87	67.296	Esox_lucius
ENSMGAG00000006892	RTCA	99	81.505	ENSFCAG00000024460	RTCA	87	81.505	Felis_catus
ENSMGAG00000006892	RTCA	90	93.706	ENSFALG00000002443	RTCA	77	93.706	Ficedula_albicollis
ENSMGAG00000006892	RTCA	98	65.397	ENSFDAG00000016084	-	86	65.397	Fukomys_damarensis
ENSMGAG00000006892	RTCA	99	80.878	ENSFDAG00000012070	-	87	80.878	Fukomys_damarensis
ENSMGAG00000006892	RTCA	64	67.488	ENSFHEG00000002868	rtca	93	64.384	Fundulus_heteroclitus
ENSMGAG00000006892	RTCA	99	66.038	ENSGMOG00000013264	rtca	87	66.038	Gadus_morhua
ENSMGAG00000006892	RTCA	99	97.799	ENSGALG00000005277	RTCA	87	97.799	Gallus_gallus
ENSMGAG00000006892	RTCA	99	68.239	ENSGAFG00000011853	rtca	87	68.239	Gambusia_affinis
ENSMGAG00000006892	RTCA	99	66.981	ENSGACG00000013497	rtca	87	66.981	Gasterosteus_aculeatus
ENSMGAG00000006892	RTCA	77	87.398	ENSGAGG00000023306	RTCA	84	87.398	Gopherus_agassizii
ENSMGAG00000006892	RTCA	100	80.938	ENSGGOG00000009546	-	100	80.906	Gorilla_gorilla
ENSMGAG00000006892	RTCA	99	80.564	ENSGGOG00000044018	-	87	80.564	Gorilla_gorilla
ENSMGAG00000006892	RTCA	99	67.925	ENSHBUG00000002114	rtca	87	67.925	Haplochromis_burtoni
ENSMGAG00000006892	RTCA	99	80.251	ENSHGLG00000002617	RTCA	87	80.251	Heterocephalus_glaber_female
ENSMGAG00000006892	RTCA	99	80.251	ENSHGLG00100006056	RTCA	87	80.251	Heterocephalus_glaber_male
ENSMGAG00000006892	RTCA	99	61.635	ENSHCOG00000020628	rtca	78	61.635	Hippocampus_comes
ENSMGAG00000006892	RTCA	99	70.755	ENSIPUG00000024803	rtca	87	70.755	Ictalurus_punctatus
ENSMGAG00000006892	RTCA	99	72.555	ENSSTOG00000033099	-	86	72.555	Ictidomys_tridecemlineatus
ENSMGAG00000006892	RTCA	99	81.447	ENSSTOG00000013528	-	93	81.447	Ictidomys_tridecemlineatus
ENSMGAG00000006892	RTCA	99	56.426	ENSJJAG00000016178	Rtca	84	56.426	Jaculus_jaculus
ENSMGAG00000006892	RTCA	99	69.182	ENSKMAG00000006651	rtca	87	69.182	Kryptolebias_marmoratus
ENSMGAG00000006892	RTCA	99	66.667	ENSLBEG00000028971	rtca	87	66.667	Labrus_bergylta
ENSMGAG00000006892	RTCA	100	66.144	ENSLBEG00000002448	-	99	66.144	Labrus_bergylta
ENSMGAG00000006892	RTCA	99	75.472	ENSLACG00000013666	RTCA	87	75.472	Latimeria_chalumnae
ENSMGAG00000006892	RTCA	99	68.553	ENSLOCG00000000093	rtca	87	68.553	Lepisosteus_oculatus
ENSMGAG00000006892	RTCA	99	80.251	ENSLAFG00000001473	RTCA	87	80.251	Loxodonta_africana
ENSMGAG00000006892	RTCA	100	81.250	ENSMFAG00000034132	RTCA	87	81.818	Macaca_fascicularis
ENSMGAG00000006892	RTCA	100	81.250	ENSMMUG00000019105	RTCA	87	81.818	Macaca_mulatta
ENSMGAG00000006892	RTCA	97	81.230	ENSMNEG00000037163	RTCA	100	81.230	Macaca_nemestrina
ENSMGAG00000006892	RTCA	100	63.750	ENSMLEG00000042151	RTCA	84	64.263	Mandrillus_leucophaeus
ENSMGAG00000006892	RTCA	99	69.811	ENSMAMG00000016536	rtca	87	69.811	Mastacembelus_armatus
ENSMGAG00000006892	RTCA	99	67.925	ENSMZEG00005017945	rtca	87	67.925	Maylandia_zebra
ENSMGAG00000006892	RTCA	99	80.564	ENSMAUG00000008488	Rtca	87	80.564	Mesocricetus_auratus
ENSMGAG00000006892	RTCA	97	80.906	ENSMICG00000008643	RTCA	100	80.906	Microcebus_murinus
ENSMGAG00000006892	RTCA	99	81.505	ENSMOCG00000016660	Rtca	87	81.505	Microtus_ochrogaster
ENSMGAG00000006892	RTCA	97	68.182	ENSMMOG00000007750	rtca	100	68.182	Mola_mola
ENSMGAG00000006892	RTCA	99	79.937	ENSMODG00000003557	RTCA	87	79.937	Monodelphis_domestica
ENSMGAG00000006892	RTCA	99	69.182	ENSMALG00000020844	rtca	87	69.182	Monopterus_albus
ENSMGAG00000006892	RTCA	99	80.878	MGP_CAROLIEiJ_G0025565	Rtca	100	81.690	Mus_caroli
ENSMGAG00000006892	RTCA	99	80.251	ENSMUSG00000000339	Rtca	100	81.690	Mus_musculus
ENSMGAG00000006892	RTCA	99	81.191	MGP_PahariEiJ_G0027011	Rtca	100	82.394	Mus_pahari
ENSMGAG00000006892	RTCA	99	80.564	MGP_SPRETEiJ_G0026515	Rtca	100	80.986	Mus_spretus
ENSMGAG00000006892	RTCA	99	81.818	ENSMPUG00000012119	RTCA	87	81.818	Mustela_putorius_furo
ENSMGAG00000006892	RTCA	99	79.624	ENSMLUG00000009922	RTCA	87	79.624	Myotis_lucifugus
ENSMGAG00000006892	RTCA	99	80.564	ENSNGAG00000011540	Rtca	92	80.442	Nannospalax_galili
ENSMGAG00000006892	RTCA	99	67.925	ENSNBRG00000003062	rtca	87	67.925	Neolamprologus_brichardi
ENSMGAG00000006892	RTCA	100	80.938	ENSNLEG00000031426	RTCA	87	81.505	Nomascus_leucogenys
ENSMGAG00000006892	RTCA	50	83.333	ENSMEUG00000010030	-	61	66.667	Notamacropus_eugenii
ENSMGAG00000006892	RTCA	84	77.323	ENSOPRG00000012092	RTCA	71	77.323	Ochotona_princeps
ENSMGAG00000006892	RTCA	99	79.937	ENSODEG00000006990	RTCA	88	79.937	Octodon_degus
ENSMGAG00000006892	RTCA	99	67.296	ENSONIG00000007753	rtca	87	67.296	Oreochromis_niloticus
ENSMGAG00000006892	RTCA	99	80.126	ENSOANG00000012055	RTCA	98	80.126	Ornithorhynchus_anatinus
ENSMGAG00000006892	RTCA	99	81.505	ENSOCUG00000014247	RTCA	87	81.505	Oryctolagus_cuniculus
ENSMGAG00000006892	RTCA	99	67.925	ENSORLG00000013605	rtca	87	67.925	Oryzias_latipes
ENSMGAG00000006892	RTCA	99	67.925	ENSORLG00020001904	rtca	87	67.925	Oryzias_latipes_hni
ENSMGAG00000006892	RTCA	99	67.925	ENSORLG00015021064	rtca	87	67.925	Oryzias_latipes_hsok
ENSMGAG00000006892	RTCA	99	68.868	ENSOMEG00000000756	rtca	87	68.868	Oryzias_melastigma
ENSMGAG00000006892	RTCA	97	73.312	ENSOGAG00000005627	RTCA	85	73.312	Otolemur_garnettii
ENSMGAG00000006892	RTCA	99	82.075	ENSOARG00000018122	RTCA	100	82.075	Ovis_aries
ENSMGAG00000006892	RTCA	100	81.250	ENSPPAG00000035119	RTCA	100	81.230	Pan_paniscus
ENSMGAG00000006892	RTCA	99	81.505	ENSPPRG00000000350	RTCA	87	81.505	Panthera_pardus
ENSMGAG00000006892	RTCA	99	81.191	ENSPTIG00000012816	RTCA	87	81.191	Panthera_tigris_altaica
ENSMGAG00000006892	RTCA	100	80.625	ENSPTRG00000001004	RTCA	100	80.583	Pan_troglodytes
ENSMGAG00000006892	RTCA	99	82.132	ENSPANG00000000346	RTCA	87	82.132	Papio_anubis
ENSMGAG00000006892	RTCA	99	72.013	ENSPKIG00000001653	rtca	87	72.013	Paramormyrops_kingsleyae
ENSMGAG00000006892	RTCA	99	86.792	ENSPSIG00000011408	RTCA	87	86.792	Pelodiscus_sinensis
ENSMGAG00000006892	RTCA	99	80.878	ENSPEMG00000018582	Rtca	87	80.878	Peromyscus_maniculatus_bairdii
ENSMGAG00000006892	RTCA	99	55.172	ENSPMAG00000009110	rtca	87	55.172	Petromyzon_marinus
ENSMGAG00000006892	RTCA	99	80.878	ENSPCIG00000007684	RTCA	87	80.878	Phascolarctos_cinereus
ENSMGAG00000006892	RTCA	99	68.454	ENSPFOG00000004824	rtca	87	68.454	Poecilia_formosa
ENSMGAG00000006892	RTCA	99	68.553	ENSPLAG00000011753	rtca	87	68.553	Poecilia_latipinna
ENSMGAG00000006892	RTCA	99	68.553	ENSPMEG00000020469	rtca	87	68.553	Poecilia_mexicana
ENSMGAG00000006892	RTCA	99	69.497	ENSPREG00000001365	rtca	87	69.497	Poecilia_reticulata
ENSMGAG00000006892	RTCA	99	81.191	ENSPPYG00000001115	RTCA	87	81.191	Pongo_abelii
ENSMGAG00000006892	RTCA	99	77.743	ENSPCAG00000005076	RTCA	87	77.743	Procavia_capensis
ENSMGAG00000006892	RTCA	99	81.505	ENSPCOG00000005603	RTCA	87	81.505	Propithecus_coquereli
ENSMGAG00000006892	RTCA	99	80.442	ENSPVAG00000009478	RTCA	84	80.442	Pteropus_vampyrus
ENSMGAG00000006892	RTCA	99	67.925	ENSPNYG00000004722	rtca	87	67.925	Pundamilia_nyererei
ENSMGAG00000006892	RTCA	99	71.069	ENSPNAG00000022270	rtca	87	71.069	Pygocentrus_nattereri
ENSMGAG00000006892	RTCA	99	81.191	ENSRNOG00000014575	Rtca	87	81.191	Rattus_norvegicus
ENSMGAG00000006892	RTCA	100	80.625	ENSRBIG00000041180	RTCA	100	80.583	Rhinopithecus_bieti
ENSMGAG00000006892	RTCA	100	80.625	ENSRROG00000024929	RTCA	87	81.191	Rhinopithecus_roxellana
ENSMGAG00000006892	RTCA	99	81.191	ENSSBOG00000028626	RTCA	87	81.191	Saimiri_boliviensis_boliviensis
ENSMGAG00000006892	RTCA	99	80.564	ENSSHAG00000001758	RTCA	87	80.564	Sarcophilus_harrisii
ENSMGAG00000006892	RTCA	99	66.667	ENSSMAG00000014680	rtca	86	66.667	Scophthalmus_maximus
ENSMGAG00000006892	RTCA	99	68.239	ENSSDUG00000015585	rtca	86	68.239	Seriola_dumerili
ENSMGAG00000006892	RTCA	99	68.553	ENSSLDG00000018985	rtca	86	68.553	Seriola_lalandi_dorsalis
ENSMGAG00000006892	RTCA	99	78.549	ENSSARG00000013993	RTCA	100	78.549	Sorex_araneus
ENSMGAG00000006892	RTCA	99	67.925	ENSSPAG00000011938	rtca	87	67.925	Stegastes_partitus
ENSMGAG00000006892	RTCA	99	83.386	ENSSSCG00000006865	RTCA	87	83.386	Sus_scrofa
ENSMGAG00000006892	RTCA	99	92.767	ENSTGUG00000005154	RTCA	87	92.767	Taeniopygia_guttata
ENSMGAG00000006892	RTCA	99	69.182	ENSTRUG00000008799	rtca	87	69.182	Takifugu_rubripes
ENSMGAG00000006892	RTCA	99	68.239	ENSTNIG00000004725	rtca	87	68.239	Tetraodon_nigroviridis
ENSMGAG00000006892	RTCA	52	83.333	ENSTBEG00000000943	RTCA	66	52.941	Tupaia_belangeri
ENSMGAG00000006892	RTCA	100	80.312	ENSTTRG00000015327	RTCA	84	80.312	Tursiops_truncatus
ENSMGAG00000006892	RTCA	92	79.932	ENSUAMG00000017265	RTCA	83	79.932	Ursus_americanus
ENSMGAG00000006892	RTCA	99	80.878	ENSUMAG00000007881	RTCA	87	80.878	Ursus_maritimus
ENSMGAG00000006892	RTCA	99	73.817	ENSVPAG00000001039	RTCA	84	73.817	Vicugna_pacos
ENSMGAG00000006892	RTCA	99	81.191	ENSVVUG00000022041	RTCA	59	81.191	Vulpes_vulpes
ENSMGAG00000006892	RTCA	99	62.617	ENSXETG00000031661	RTCA	90	60.568	Xenopus_tropicalis
ENSMGAG00000006892	RTCA	99	59.748	ENSXCOG00000008002	rtca	86	59.748	Xiphophorus_couchianus
ENSMGAG00000006892	RTCA	99	68.553	ENSXMAG00000005482	rtca	87	68.553	Xiphophorus_maculatus