EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000007017 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Minus strand
Length: 17065 bases
Position: chr7:10291103-10308167
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000007142	SF3b1	PF08920.10	4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000007908	SF3B1-201	3876	-	ENSMGAP00000007142	1291 (aa)	-	G1N5C2

Gene Model

Click here to download ENSMGAG00000007017's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000007017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000007017	SF3B1	99	98.764	ENSG00000115524	SF3B1	99	98.764	Homo_sapiens
ENSMGAG00000007017	SF3B1	99	93.323	ENSAPOG00000011894	sf3b1	99	93.185	Acanthochromis_polyacanthus
ENSMGAG00000007017	SF3B1	99	98.537	ENSAMEG00000013809	SF3B1	99	98.537	Ailuropoda_melanoleuca
ENSMGAG00000007017	SF3B1	99	92.621	ENSACIG00000020910	sf3b1	96	92.621	Amphilophus_citrinellus
ENSMGAG00000007017	SF3B1	99	93.262	ENSAOCG00000004478	sf3b1	99	93.262	Amphiprion_ocellaris
ENSMGAG00000007017	SF3B1	99	93.262	ENSAPEG00000012937	sf3b1	99	93.262	Amphiprion_percula
ENSMGAG00000007017	SF3B1	99	93.395	ENSATEG00000020435	sf3b1	99	93.395	Anabas_testudineus
ENSMGAG00000007017	SF3B1	99	99.381	ENSAPLG00000003993	SF3B1	99	99.381	Anas_platyrhynchos
ENSMGAG00000007017	SF3B1	99	98.453	ENSACAG00000009612	SF3B1	99	98.453	Anolis_carolinensis
ENSMGAG00000007017	SF3B1	99	98.764	ENSANAG00000021577	SF3B1	100	99.741	Aotus_nancymaae
ENSMGAG00000007017	SF3B1	99	92.337	ENSACLG00000023470	sf3b1	99	92.337	Astatotilapia_calliptera
ENSMGAG00000007017	SF3B1	99	93.492	ENSAMXG00000002219	sf3b1	99	93.492	Astyanax_mexicanus
ENSMGAG00000007017	SF3B1	99	98.687	ENSBTAG00000008915	SF3B1	99	98.687	Bos_taurus
ENSMGAG00000007017	SF3B1	99	66.717	WBGene00011605	sftb-1	98	66.793	Caenorhabditis_elegans
ENSMGAG00000007017	SF3B1	99	98.764	ENSCJAG00000003902	SF3B1	99	98.764	Callithrix_jacchus
ENSMGAG00000007017	SF3B1	99	98.764	ENSCAFG00000010826	SF3B1	99	98.764	Canis_familiaris
ENSMGAG00000007017	SF3B1	99	98.764	ENSCAFG00020004750	SF3B1	99	98.764	Canis_lupus_dingo
ENSMGAG00000007017	SF3B1	99	98.687	ENSCHIG00000015226	SF3B1	99	98.687	Capra_hircus
ENSMGAG00000007017	SF3B1	99	98.687	ENSTSYG00000009214	SF3B1	99	98.687	Carlito_syrichta
ENSMGAG00000007017	SF3B1	99	98.766	ENSCAPG00000006547	SF3B1	99	98.766	Cavia_aperea
ENSMGAG00000007017	SF3B1	99	98.766	ENSCPOG00000009353	SF3B1	100	98.764	Cavia_porcellus
ENSMGAG00000007017	SF3B1	99	98.764	ENSCCAG00000020506	SF3B1	99	98.764	Cebus_capucinus
ENSMGAG00000007017	SF3B1	99	98.764	ENSCATG00000035735	SF3B1	99	98.764	Cercocebus_atys
ENSMGAG00000007017	SF3B1	99	98.764	ENSCLAG00000014767	SF3B1	99	98.764	Chinchilla_lanigera
ENSMGAG00000007017	SF3B1	99	98.764	ENSCSAG00000011505	SF3B1	99	98.764	Chlorocebus_sabaeus
ENSMGAG00000007017	SF3B1	76	94.231	ENSCHOG00000009860	SF3B1	75	94.231	Choloepus_hoffmanni
ENSMGAG00000007017	SF3B1	99	98.916	ENSCPBG00000021902	SF3B1	100	99.660	Chrysemys_picta_bellii
ENSMGAG00000007017	SF3B1	69	78.060	ENSCING00000002558	-	100	78.414	Ciona_intestinalis
ENSMGAG00000007017	SF3B1	99	79.421	ENSCSAVG00000002559	-	99	79.268	Ciona_savignyi
ENSMGAG00000007017	SF3B1	99	98.764	ENSCANG00000029415	SF3B1	99	98.764	Colobus_angolensis_palliatus
ENSMGAG00000007017	SF3B1	99	98.764	ENSCGRG00001016990	Sf3b1	99	98.764	Cricetulus_griseus_chok1gshd
ENSMGAG00000007017	SF3B1	99	98.764	ENSCGRG00000005301	Sf3b1	99	98.764	Cricetulus_griseus_crigri
ENSMGAG00000007017	SF3B1	99	89.547	ENSCSEG00000003860	sf3b1	99	89.547	Cynoglossus_semilaevis
ENSMGAG00000007017	SF3B1	96	93.301	ENSCVAG00000003680	sf3b1	99	93.301	Cyprinodon_variegatus
ENSMGAG00000007017	SF3B1	99	93.185	ENSDARG00000056138	sf3b1	99	93.185	Danio_rerio
ENSMGAG00000007017	SF3B1	99	98.688	ENSDNOG00000011754	SF3B1	99	98.688	Dasypus_novemcinctus
ENSMGAG00000007017	SF3B1	99	96.291	ENSDORG00000002399	Sf3b1	100	96.291	Dipodomys_ordii
ENSMGAG00000007017	SF3B1	99	76.649	FBgn0031266	Sf3b1	99	76.649	Drosophila_melanogaster
ENSMGAG00000007017	SF3B1	83	97.959	ENSETEG00000009188	SF3B1	100	97.959	Echinops_telfairi
ENSMGAG00000007017	SF3B1	99	87.077	ENSEBUG00000004325	sf3b1	100	90.174	Eptatretus_burgeri
ENSMGAG00000007017	SF3B1	99	98.764	ENSEASG00005020159	SF3B1	97	98.764	Equus_asinus_asinus
ENSMGAG00000007017	SF3B1	99	98.764	ENSECAG00000021657	SF3B1	97	98.764	Equus_caballus
ENSMGAG00000007017	SF3B1	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSMGAG00000007017	SF3B1	99	92.167	ENSELUG00000005977	sf3b1	97	92.395	Esox_lucius
ENSMGAG00000007017	SF3B1	99	98.764	ENSFCAG00000005038	SF3B1	99	98.764	Felis_catus
ENSMGAG00000007017	SF3B1	99	99.151	ENSFALG00000004281	SF3B1	99	99.151	Ficedula_albicollis
ENSMGAG00000007017	SF3B1	99	98.764	ENSFDAG00000017510	SF3B1	99	98.764	Fukomys_damarensis
ENSMGAG00000007017	SF3B1	99	92.573	ENSFHEG00000014333	sf3b1	99	92.573	Fundulus_heteroclitus
ENSMGAG00000007017	SF3B1	99	92.863	ENSGMOG00000006773	sf3b1	99	92.863	Gadus_morhua
ENSMGAG00000007017	SF3B1	99	99.381	ENSGALG00000008038	SF3B1	99	99.381	Gallus_gallus
ENSMGAG00000007017	SF3B1	98	93.692	ENSGAFG00000000704	sf3b1	99	93.692	Gambusia_affinis
ENSMGAG00000007017	SF3B1	99	92.402	ENSGACG00000008839	sf3b1	99	92.863	Gasterosteus_aculeatus
ENSMGAG00000007017	SF3B1	99	98.916	ENSGAGG00000017478	SF3B1	99	98.916	Gopherus_agassizii
ENSMGAG00000007017	SF3B1	99	91.942	ENSGGOG00000009264	SF3B1	99	93.149	Gorilla_gorilla
ENSMGAG00000007017	SF3B1	99	92.402	ENSHBUG00000007705	sf3b1	99	92.402	Haplochromis_burtoni
ENSMGAG00000007017	SF3B1	99	98.764	ENSHGLG00000008285	-	99	98.764	Heterocephalus_glaber_female
ENSMGAG00000007017	SF3B1	99	96.757	ENSHGLG00100005535	-	99	96.757	Heterocephalus_glaber_male
ENSMGAG00000007017	SF3B1	99	92.384	ENSHCOG00000016775	sf3b1	99	92.460	Hippocampus_comes
ENSMGAG00000007017	SF3B1	99	93.487	ENSIPUG00000013171	sf3b1	99	93.487	Ictalurus_punctatus
ENSMGAG00000007017	SF3B1	99	98.764	ENSSTOG00000011034	SF3B1	99	98.764	Ictidomys_tridecemlineatus
ENSMGAG00000007017	SF3B1	99	98.682	ENSJJAG00000010903	Sf3b1	99	98.682	Jaculus_jaculus
ENSMGAG00000007017	SF3B1	99	92.437	ENSKMAG00000004009	sf3b1	99	92.513	Kryptolebias_marmoratus
ENSMGAG00000007017	SF3B1	99	92.995	ENSLBEG00000022208	sf3b1	99	92.995	Labrus_bergylta
ENSMGAG00000007017	SF3B1	99	92.101	ENSLACG00000014832	SF3B1	99	92.101	Latimeria_chalumnae
ENSMGAG00000007017	SF3B1	99	94.266	ENSLOCG00000003899	sf3b1	99	94.266	Lepisosteus_oculatus
ENSMGAG00000007017	SF3B1	99	98.764	ENSLAFG00000001956	SF3B1	99	98.764	Loxodonta_africana
ENSMGAG00000007017	SF3B1	99	98.688	ENSMMUG00000022430	SF3B1	99	98.688	Macaca_mulatta
ENSMGAG00000007017	SF3B1	99	98.764	ENSMNEG00000042333	SF3B1	100	99.741	Macaca_nemestrina
ENSMGAG00000007017	SF3B1	95	93.176	ENSMLEG00000026141	SF3B1	99	93.468	Mandrillus_leucophaeus
ENSMGAG00000007017	SF3B1	99	93.333	ENSMAMG00000010241	sf3b1	99	93.333	Mastacembelus_armatus
ENSMGAG00000007017	SF3B1	99	92.337	ENSMZEG00005021254	sf3b1	99	92.337	Maylandia_zebra
ENSMGAG00000007017	SF3B1	99	94.149	ENSMAUG00000009071	Sf3b1	99	94.303	Mesocricetus_auratus
ENSMGAG00000007017	SF3B1	99	98.687	ENSMICG00000013879	SF3B1	99	98.687	Microcebus_murinus
ENSMGAG00000007017	SF3B1	99	94.363	ENSMOCG00000000455	Sf3b1	99	94.363	Microtus_ochrogaster
ENSMGAG00000007017	SF3B1	83	92.620	ENSMMOG00000000475	sf3b1	99	92.620	Mola_mola
ENSMGAG00000007017	SF3B1	99	98.454	ENSMODG00000012275	SF3B1	99	98.454	Monodelphis_domestica
ENSMGAG00000007017	SF3B1	99	93.257	ENSMALG00000017211	sf3b1	99	93.257	Monopterus_albus
ENSMGAG00000007017	SF3B1	99	98.764	MGP_CAROLIEiJ_G0014141	Sf3b1	99	98.764	Mus_caroli
ENSMGAG00000007017	SF3B1	99	98.764	ENSMUSG00000025982	Sf3b1	99	98.764	Mus_musculus
ENSMGAG00000007017	SF3B1	99	98.764	MGP_SPRETEiJ_G0014947	Sf3b1	99	98.764	Mus_spretus
ENSMGAG00000007017	SF3B1	99	98.764	ENSMPUG00000007799	SF3B1	99	98.764	Mustela_putorius_furo
ENSMGAG00000007017	SF3B1	99	97.529	ENSMLUG00000000840	SF3B1	99	97.529	Myotis_lucifugus
ENSMGAG00000007017	SF3B1	99	98.764	ENSNGAG00000021884	-	99	98.764	Nannospalax_galili
ENSMGAG00000007017	SF3B1	99	88.556	ENSNBRG00000015816	sf3b1	99	88.556	Neolamprologus_brichardi
ENSMGAG00000007017	SF3B1	99	98.764	ENSNLEG00000006861	SF3B1	99	98.764	Nomascus_leucogenys
ENSMGAG00000007017	SF3B1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSMGAG00000007017	SF3B1	99	85.627	ENSOPRG00000008596	SF3B1	99	85.627	Ochotona_princeps
ENSMGAG00000007017	SF3B1	99	98.764	ENSODEG00000011153	-	99	98.764	Octodon_degus
ENSMGAG00000007017	SF3B1	99	92.337	ENSONIG00000013758	sf3b1	99	92.337	Oreochromis_niloticus
ENSMGAG00000007017	SF3B1	84	98.801	ENSOCUG00000012722	-	96	98.801	Oryctolagus_cuniculus
ENSMGAG00000007017	SF3B1	99	92.874	ENSORLG00000020219	sf3b1	99	92.874	Oryzias_latipes
ENSMGAG00000007017	SF3B1	99	92.874	ENSORLG00020001746	sf3b1	99	92.874	Oryzias_latipes_hni
ENSMGAG00000007017	SF3B1	63	90.229	ENSORLG00015001759	sf3b1	97	90.229	Oryzias_latipes_hsok
ENSMGAG00000007017	SF3B1	99	92.956	ENSOMEG00000019231	sf3b1	99	92.956	Oryzias_melastigma
ENSMGAG00000007017	SF3B1	99	98.687	ENSOARG00000015374	SF3B1	99	98.687	Ovis_aries
ENSMGAG00000007017	SF3B1	99	98.764	ENSPPAG00000035007	SF3B1	99	98.764	Pan_paniscus
ENSMGAG00000007017	SF3B1	99	98.764	ENSPPRG00000009090	SF3B1	99	98.764	Panthera_pardus
ENSMGAG00000007017	SF3B1	99	98.764	ENSPTIG00000021557	SF3B1	99	98.764	Panthera_tigris_altaica
ENSMGAG00000007017	SF3B1	99	90.069	ENSPTRG00000012771	SF3B1	99	90.223	Pan_troglodytes
ENSMGAG00000007017	SF3B1	99	98.764	ENSPANG00000013417	SF3B1	99	98.764	Papio_anubis
ENSMGAG00000007017	SF3B1	99	94.402	ENSPKIG00000000784	sf3b1	99	94.402	Paramormyrops_kingsleyae
ENSMGAG00000007017	SF3B1	99	97.602	ENSPSIG00000017222	SF3B1	99	97.602	Pelodiscus_sinensis
ENSMGAG00000007017	SF3B1	90	93.452	ENSPMGG00000004330	sf3b1	98	93.452	Periophthalmus_magnuspinnatus
ENSMGAG00000007017	SF3B1	99	98.764	ENSPEMG00000010699	Sf3b1	100	98.764	Peromyscus_maniculatus_bairdii
ENSMGAG00000007017	SF3B1	99	89.732	ENSPMAG00000001311	sf3b1	99	89.885	Petromyzon_marinus
ENSMGAG00000007017	SF3B1	99	98.377	ENSPCIG00000010642	SF3B1	99	98.377	Phascolarctos_cinereus
ENSMGAG00000007017	SF3B1	99	93.037	ENSPFOG00000000073	sf3b1	99	93.037	Poecilia_formosa
ENSMGAG00000007017	SF3B1	99	93.109	ENSPLAG00000002293	sf3b1	99	93.109	Poecilia_latipinna
ENSMGAG00000007017	SF3B1	99	93.109	ENSPMEG00000000446	sf3b1	97	93.109	Poecilia_mexicana
ENSMGAG00000007017	SF3B1	99	93.185	ENSPREG00000019652	sf3b1	99	93.185	Poecilia_reticulata
ENSMGAG00000007017	SF3B1	99	98.631	ENSPPYG00000013044	SF3B1	96	98.631	Pongo_abelii
ENSMGAG00000007017	SF3B1	99	98.610	ENSPCAG00000009292	SF3B1	99	98.610	Procavia_capensis
ENSMGAG00000007017	SF3B1	99	98.687	ENSPCOG00000024074	SF3B1	99	98.687	Propithecus_coquereli
ENSMGAG00000007017	SF3B1	99	98.764	ENSPVAG00000008302	SF3B1	99	98.764	Pteropus_vampyrus
ENSMGAG00000007017	SF3B1	99	92.337	ENSPNYG00000014939	sf3b1	99	92.337	Pundamilia_nyererei
ENSMGAG00000007017	SF3B1	99	93.415	ENSPNAG00000008288	sf3b1	99	93.492	Pygocentrus_nattereri
ENSMGAG00000007017	SF3B1	99	98.764	ENSRNOG00000013516	Sf3b1	99	98.764	Rattus_norvegicus
ENSMGAG00000007017	SF3B1	99	95.212	ENSRBIG00000026096	SF3B1	99	95.212	Rhinopithecus_bieti
ENSMGAG00000007017	SF3B1	99	98.764	ENSRROG00000031308	SF3B1	99	98.764	Rhinopithecus_roxellana
ENSMGAG00000007017	SF3B1	99	98.764	ENSSBOG00000020080	SF3B1	99	98.764	Saimiri_boliviensis_boliviensis
ENSMGAG00000007017	SF3B1	99	98.454	ENSSHAG00000017564	SF3B1	99	98.454	Sarcophilus_harrisii
ENSMGAG00000007017	SF3B1	99	94.181	ENSSFOG00015021535	sf3b1	99	94.334	Scleropages_formosus
ENSMGAG00000007017	SF3B1	99	92.361	ENSSMAG00000013977	sf3b1	98	92.437	Scophthalmus_maximus
ENSMGAG00000007017	SF3B1	99	93.180	ENSSDUG00000017422	sf3b1	99	93.180	Seriola_dumerili
ENSMGAG00000007017	SF3B1	99	93.103	ENSSLDG00000019495	sf3b1	99	93.103	Seriola_lalandi_dorsalis
ENSMGAG00000007017	SF3B1	77	99.824	ENSSARG00000007016	SF3B1	76	99.824	Sorex_araneus
ENSMGAG00000007017	SF3B1	99	98.762	ENSSPUG00000000410	SF3B1	99	98.762	Sphenodon_punctatus
ENSMGAG00000007017	SF3B1	99	93.333	ENSSPAG00000010451	sf3b1	98	93.333	Stegastes_partitus
ENSMGAG00000007017	SF3B1	90	99.741	ENSSSCG00000016075	SF3B1	100	99.741	Sus_scrofa
ENSMGAG00000007017	SF3B1	99	99.303	ENSTGUG00000010553	SF3B1	99	99.303	Taeniopygia_guttata
ENSMGAG00000007017	SF3B1	99	92.950	ENSTRUG00000015534	sf3b1	99	92.950	Takifugu_rubripes
ENSMGAG00000007017	SF3B1	87	99.690	ENSTBEG00000008714	SF3B1	92	99.690	Tupaia_belangeri
ENSMGAG00000007017	SF3B1	92	94.058	ENSTTRG00000003414	SF3B1	92	94.058	Tursiops_truncatus
ENSMGAG00000007017	SF3B1	94	93.023	ENSUAMG00000018506	SF3B1	99	98.988	Ursus_americanus
ENSMGAG00000007017	SF3B1	99	98.764	ENSUMAG00000020945	SF3B1	99	98.764	Ursus_maritimus
ENSMGAG00000007017	SF3B1	95	95.122	ENSVPAG00000005798	SF3B1	95	95.122	Vicugna_pacos
ENSMGAG00000007017	SF3B1	99	98.764	ENSVVUG00000025948	SF3B1	94	98.764	Vulpes_vulpes
ENSMGAG00000007017	SF3B1	99	96.136	ENSXETG00000013339	sf3b1	99	96.136	Xenopus_tropicalis
ENSMGAG00000007017	SF3B1	99	89.591	ENSXCOG00000018086	sf3b1	99	89.478	Xiphophorus_couchianus
ENSMGAG00000007017	SF3B1	99	93.109	ENSXMAG00000007369	sf3b1	99	93.328	Xiphophorus_maculatus