EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMGAG00000007042 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 24081 bases
Position: chr9:14194266-14218346
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000007168	ResIII	PF04851.15	8.4e-12	1	1
ENSMGAP00000007168	DEAD	PF00270.29	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000007935	SMARCA1-201	3048	-	ENSMGAP00000007168	1015 (aa)	-	G1N5E7

Gene Model

Click here to download ENSMGAG00000007042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000007042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMGAG00000007042	SMARCA1	99	86.600	ENSMGAG00000003517	SMARCA5	98	86.600
ENSMGAG00000007042	SMARCA1	54	43.110	ENSMGAG00000006818	HELLS	68	43.416
ENSMGAG00000007042	SMARCA1	57	41.338	ENSMGAG00000014304	CHD1L	64	41.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000007042	SMARCA1	99	91.494	ENSG00000102038	SMARCA1	95	91.330	Homo_sapiens
ENSMGAG00000007042	SMARCA1	97	83.300	ENSAPOG00000016035	smarca5	98	83.477	Acanthochromis_polyacanthus
ENSMGAG00000007042	SMARCA1	99	90.999	ENSAMEG00000015218	SMARCA1	95	90.837	Ailuropoda_melanoleuca
ENSMGAG00000007042	SMARCA1	90	83.716	ENSACIG00000016982	smarca5	99	83.811	Amphilophus_citrinellus
ENSMGAG00000007042	SMARCA1	97	83.300	ENSAOCG00000015578	smarca5	94	83.300	Amphiprion_ocellaris
ENSMGAG00000007042	SMARCA1	97	83.300	ENSAPEG00000011117	smarca5	99	83.372	Amphiprion_percula
ENSMGAG00000007042	SMARCA1	98	82.797	ENSATEG00000012894	smarca5	95	82.797	Anabas_testudineus
ENSMGAG00000007042	SMARCA1	98	98.189	ENSAPLG00000013149	SMARCA1	100	98.189	Anas_platyrhynchos
ENSMGAG00000007042	SMARCA1	99	94.274	ENSACAG00000011376	SMARCA1	95	94.274	Anolis_carolinensis
ENSMGAG00000007042	SMARCA1	99	86.350	ENSANAG00000023098	SMARCA1	95	86.207	Aotus_nancymaae
ENSMGAG00000007042	SMARCA1	98	83.400	ENSACLG00000025356	smarca5	94	83.400	Astatotilapia_calliptera
ENSMGAG00000007042	SMARCA1	93	90.658	ENSAMXG00000011227	smarca1	99	90.658	Astyanax_mexicanus
ENSMGAG00000007042	SMARCA1	97	84.195	ENSAMXG00000005709	smarca5	94	84.195	Astyanax_mexicanus
ENSMGAG00000007042	SMARCA1	99	90.684	ENSBTAG00000002292	SMARCA1	93	91.487	Bos_taurus
ENSMGAG00000007042	SMARCA1	99	61.988	WBGene00002169	isw-1	99	61.988	Caenorhabditis_elegans
ENSMGAG00000007042	SMARCA1	99	91.494	ENSCJAG00000002868	SMARCA1	95	91.330	Callithrix_jacchus
ENSMGAG00000007042	SMARCA1	99	82.399	ENSCAFG00000018673	SMARCA1	99	82.251	Canis_familiaris
ENSMGAG00000007042	SMARCA1	99	91.296	ENSCAFG00020001751	SMARCA1	95	91.133	Canis_lupus_dingo
ENSMGAG00000007042	SMARCA1	99	90.900	ENSCHIG00000009837	SMARCA1	95	90.739	Capra_hircus
ENSMGAG00000007042	SMARCA1	99	91.304	ENSTSYG00000004240	SMARCA1	96	91.318	Carlito_syrichta
ENSMGAG00000007042	SMARCA1	99	89.676	ENSCPOG00000013601	SMARCA1	96	89.520	Cavia_porcellus
ENSMGAG00000007042	SMARCA1	99	88.427	ENSCCAG00000030817	SMARCA1	95	88.276	Cebus_capucinus
ENSMGAG00000007042	SMARCA1	99	91.494	ENSCATG00000015921	SMARCA1	95	91.330	Cercocebus_atys
ENSMGAG00000007042	SMARCA1	99	90.307	ENSCLAG00000002171	SMARCA1	95	90.148	Chinchilla_lanigera
ENSMGAG00000007042	SMARCA1	99	91.395	ENSCSAG00000008460	SMARCA1	95	91.232	Chlorocebus_sabaeus
ENSMGAG00000007042	SMARCA1	99	96.548	ENSCPBG00000001146	SMARCA1	95	96.548	Chrysemys_picta_bellii
ENSMGAG00000007042	SMARCA1	98	72.393	ENSCING00000004110	swi/snf	97	72.393	Ciona_intestinalis
ENSMGAG00000007042	SMARCA1	98	72.421	ENSCSAVG00000004620	-	100	73.626	Ciona_savignyi
ENSMGAG00000007042	SMARCA1	99	91.395	ENSCANG00000007183	SMARCA1	95	91.232	Colobus_angolensis_palliatus
ENSMGAG00000007042	SMARCA1	99	89.683	ENSCGRG00001010776	Smarca1	95	89.261	Cricetulus_griseus_chok1gshd
ENSMGAG00000007042	SMARCA1	97	89.676	ENSCGRG00000015301	Smarca1	96	89.928	Cricetulus_griseus_crigri
ENSMGAG00000007042	SMARCA1	97	83.198	ENSCSEG00000000328	smarca5	95	82.482	Cynoglossus_semilaevis
ENSMGAG00000007042	SMARCA1	98	82.596	ENSCVAG00000008668	smarca5	99	82.907	Cyprinodon_variegatus
ENSMGAG00000007042	SMARCA1	99	82.061	ENSDARG00000052348	smarca5	96	82.061	Danio_rerio
ENSMGAG00000007042	SMARCA1	99	87.147	ENSDARG00000012776	smarca1	98	86.893	Danio_rerio
ENSMGAG00000007042	SMARCA1	98	91.010	ENSDNOG00000004315	SMARCA1	93	91.282	Dasypus_novemcinctus
ENSMGAG00000007042	SMARCA1	98	90.000	ENSDORG00000009270	Smarca1	93	90.256	Dipodomys_ordii
ENSMGAG00000007042	SMARCA1	94	74.066	FBgn0011604	Iswi	98	71.945	Drosophila_melanogaster
ENSMGAG00000007042	SMARCA1	81	89.091	ENSETEG00000017426	SMARCA1	83	89.091	Echinops_telfairi
ENSMGAG00000007042	SMARCA1	99	80.594	ENSEBUG00000001239	smarca5	98	80.594	Eptatretus_burgeri
ENSMGAG00000007042	SMARCA1	99	86.323	ENSEASG00005008218	SMARCA1	100	87.512	Equus_asinus_asinus
ENSMGAG00000007042	SMARCA1	99	91.098	ENSECAG00000012106	SMARCA1	95	90.936	Equus_caballus
ENSMGAG00000007042	SMARCA1	79	93.046	ENSEEUG00000014927	SMARCA1	81	93.046	Erinaceus_europaeus
ENSMGAG00000007042	SMARCA1	99	88.823	ENSELUG00000010515	smarca1	98	89.027	Esox_lucius
ENSMGAG00000007042	SMARCA1	100	90.936	ENSFCAG00000018496	SMARCA1	95	90.936	Felis_catus
ENSMGAG00000007042	SMARCA1	91	97.835	ENSFALG00000000209	SMARCA1	98	97.835	Ficedula_albicollis
ENSMGAG00000007042	SMARCA1	97	91.185	ENSFDAG00000009818	SMARCA1	95	91.461	Fukomys_damarensis
ENSMGAG00000007042	SMARCA1	98	82.897	ENSFHEG00000007687	smarca5	94	82.897	Fundulus_heteroclitus
ENSMGAG00000007042	SMARCA1	98	98.384	ENSGALG00000008431	SMARCA1	97	98.384	Gallus_gallus
ENSMGAG00000007042	SMARCA1	98	83.099	ENSGAFG00000017731	smarca5	95	83.099	Gambusia_affinis
ENSMGAG00000007042	SMARCA1	97	96.545	ENSGAGG00000023575	SMARCA1	100	96.545	Gopherus_agassizii
ENSMGAG00000007042	SMARCA1	74	86.111	ENSGGOG00000012841	-	95	86.111	Gorilla_gorilla
ENSMGAG00000007042	SMARCA1	99	89.713	ENSHGLG00000003080	SMARCA1	95	89.557	Heterocephalus_glaber_female
ENSMGAG00000007042	SMARCA1	99	89.339	ENSHGLG00100001102	SMARCA1	100	89.339	Heterocephalus_glaber_male
ENSMGAG00000007042	SMARCA1	97	83.030	ENSHCOG00000005458	smarca5	95	82.897	Hippocampus_comes
ENSMGAG00000007042	SMARCA1	99	83.200	ENSIPUG00000005229	SMARCA5	98	83.200	Ictalurus_punctatus
ENSMGAG00000007042	SMARCA1	99	88.218	ENSIPUG00000016905	Smarca1	99	88.900	Ictalurus_punctatus
ENSMGAG00000007042	SMARCA1	100	91.034	ENSSTOG00000014524	SMARCA1	95	91.034	Ictidomys_tridecemlineatus
ENSMGAG00000007042	SMARCA1	99	89.587	ENSJJAG00000002593	Smarca1	95	89.587	Jaculus_jaculus
ENSMGAG00000007042	SMARCA1	97	82.727	ENSKMAG00000003777	smarca5	95	82.596	Kryptolebias_marmoratus
ENSMGAG00000007042	SMARCA1	99	82.318	ENSLBEG00000018112	smarca5	95	82.318	Labrus_bergylta
ENSMGAG00000007042	SMARCA1	93	83.652	ENSLBEG00000013295	SMARCA1	100	84.309	Labrus_bergylta
ENSMGAG00000007042	SMARCA1	99	92.892	ENSLACG00000016697	SMARCA1	98	92.892	Latimeria_chalumnae
ENSMGAG00000007042	SMARCA1	99	90.523	ENSLOCG00000014591	smarca1	97	90.523	Lepisosteus_oculatus
ENSMGAG00000007042	SMARCA1	99	90.373	ENSLAFG00000000896	SMARCA1	100	90.373	Loxodonta_africana
ENSMGAG00000007042	SMARCA1	99	91.494	ENSMFAG00000002117	SMARCA1	96	92.000	Macaca_fascicularis
ENSMGAG00000007042	SMARCA1	99	91.494	ENSMMUG00000008818	SMARCA1	97	92.316	Macaca_mulatta
ENSMGAG00000007042	SMARCA1	99	91.494	ENSMNEG00000041768	SMARCA1	96	92.000	Macaca_nemestrina
ENSMGAG00000007042	SMARCA1	99	91.395	ENSMLEG00000043198	SMARCA1	95	91.232	Mandrillus_leucophaeus
ENSMGAG00000007042	SMARCA1	98	82.998	ENSMAMG00000014294	smarca5	94	82.998	Mastacembelus_armatus
ENSMGAG00000007042	SMARCA1	98	83.400	ENSMZEG00005009369	smarca5	94	83.400	Maylandia_zebra
ENSMGAG00000007042	SMARCA1	97	90.132	ENSMAUG00000008133	Smarca1	93	89.949	Mesocricetus_auratus
ENSMGAG00000007042	SMARCA1	100	91.232	ENSMICG00000015768	SMARCA1	95	91.232	Microcebus_murinus
ENSMGAG00000007042	SMARCA1	99	89.240	ENSMOCG00000009464	Smarca1	95	88.824	Microtus_ochrogaster
ENSMGAG00000007042	SMARCA1	98	81.489	ENSMMOG00000005547	smarca5	99	81.489	Mola_mola
ENSMGAG00000007042	SMARCA1	99	94.077	ENSMODG00000013187	-	96	94.077	Monodelphis_domestica
ENSMGAG00000007042	SMARCA1	97	83.030	ENSMALG00000002081	smarca5	96	83.368	Monopterus_albus
ENSMGAG00000007042	SMARCA1	100	89.020	MGP_CAROLIEiJ_G0033034	Smarca1	95	89.020	Mus_caroli
ENSMGAG00000007042	SMARCA1	100	89.118	ENSMUSG00000031099	Smarca1	95	89.118	Mus_musculus
ENSMGAG00000007042	SMARCA1	100	88.922	MGP_PahariEiJ_G0031579	Smarca1	95	88.922	Mus_pahari
ENSMGAG00000007042	SMARCA1	100	89.118	MGP_SPRETEiJ_G0034192	Smarca1	95	89.118	Mus_spretus
ENSMGAG00000007042	SMARCA1	99	91.197	ENSMPUG00000017423	SMARCA1	90	91.034	Mustela_putorius_furo
ENSMGAG00000007042	SMARCA1	100	89.184	ENSMLUG00000029614	SMARCA1	95	89.184	Myotis_lucifugus
ENSMGAG00000007042	SMARCA1	97	91.150	ENSNGAG00000006492	Smarca1	92	91.426	Nannospalax_galili
ENSMGAG00000007042	SMARCA1	98	83.400	ENSNBRG00000004463	smarca5	98	83.400	Neolamprologus_brichardi
ENSMGAG00000007042	SMARCA1	99	90.900	ENSNLEG00000015179	SMARCA1	96	91.282	Nomascus_leucogenys
ENSMGAG00000007042	SMARCA1	94	86.029	ENSMEUG00000008819	SMARCA1	100	86.029	Notamacropus_eugenii
ENSMGAG00000007042	SMARCA1	98	90.606	ENSODEG00000012163	SMARCA1	93	90.872	Octodon_degus
ENSMGAG00000007042	SMARCA1	98	83.400	ENSONIG00000009993	smarca5	94	83.400	Oreochromis_niloticus
ENSMGAG00000007042	SMARCA1	97	95.833	ENSOANG00000002862	SMARCA1	100	95.833	Ornithorhynchus_anatinus
ENSMGAG00000007042	SMARCA1	99	90.504	ENSOCUG00000001047	SMARCA1	95	90.345	Oryctolagus_cuniculus
ENSMGAG00000007042	SMARCA1	97	83.737	ENSORLG00000021998	smarca5	94	83.602	Oryzias_latipes
ENSMGAG00000007042	SMARCA1	97	83.838	ENSORLG00020017679	smarca5	94	83.702	Oryzias_latipes_hni
ENSMGAG00000007042	SMARCA1	97	83.737	ENSORLG00015017210	smarca5	94	83.501	Oryzias_latipes_hsok
ENSMGAG00000007042	SMARCA1	97	83.838	ENSOMEG00000000086	smarca5	94	83.602	Oryzias_melastigma
ENSMGAG00000007042	SMARCA1	97	92.292	ENSOGAG00000004399	SMARCA1	93	92.410	Otolemur_garnettii
ENSMGAG00000007042	SMARCA1	99	90.918	ENSOARG00000014638	SMARCA1	100	91.431	Ovis_aries
ENSMGAG00000007042	SMARCA1	99	91.494	ENSPPAG00000034647	SMARCA1	95	91.330	Pan_paniscus
ENSMGAG00000007042	SMARCA1	100	91.133	ENSPPRG00000008929	SMARCA1	95	91.133	Panthera_pardus
ENSMGAG00000007042	SMARCA1	99	90.462	ENSPTIG00000000915	SMARCA1	98	90.462	Panthera_tigris_altaica
ENSMGAG00000007042	SMARCA1	99	91.494	ENSPTRG00000049876	SMARCA1	95	91.330	Pan_troglodytes
ENSMGAG00000007042	SMARCA1	99	91.494	ENSPANG00000003871	SMARCA1	95	91.330	Papio_anubis
ENSMGAG00000007042	SMARCA1	93	89.608	ENSPKIG00000013411	smarca1	94	89.630	Paramormyrops_kingsleyae
ENSMGAG00000007042	SMARCA1	99	96.644	ENSPSIG00000010101	SMARCA1	100	96.646	Pelodiscus_sinensis
ENSMGAG00000007042	SMARCA1	97	90.743	ENSPEMG00000017503	Smarca1	93	90.564	Peromyscus_maniculatus_bairdii
ENSMGAG00000007042	SMARCA1	99	95.064	ENSPCIG00000015460	SMARCA1	98	95.064	Phascolarctos_cinereus
ENSMGAG00000007042	SMARCA1	97	83.131	ENSPFOG00000007649	smarca5	95	82.897	Poecilia_formosa
ENSMGAG00000007042	SMARCA1	97	83.131	ENSPLAG00000003363	smarca5	95	82.897	Poecilia_latipinna
ENSMGAG00000007042	SMARCA1	97	83.232	ENSPMEG00000019849	smarca5	95	82.998	Poecilia_mexicana
ENSMGAG00000007042	SMARCA1	97	83.232	ENSPREG00000023250	smarca5	95	82.998	Poecilia_reticulata
ENSMGAG00000007042	SMARCA1	99	88.625	ENSPPYG00000020703	SMARCA1	95	88.473	Pongo_abelii
ENSMGAG00000007042	SMARCA1	78	83.289	ENSPCOG00000020722	SMARCA1	94	87.302	Propithecus_coquereli
ENSMGAG00000007042	SMARCA1	92	91.355	ENSPVAG00000003805	SMARCA1	93	84.821	Pteropus_vampyrus
ENSMGAG00000007042	SMARCA1	58	86.849	ENSPNYG00000012299	smarca5	91	85.676	Pundamilia_nyererei
ENSMGAG00000007042	SMARCA1	100	89.458	ENSRNOG00000003762	Smarca1	95	89.458	Rattus_norvegicus
ENSMGAG00000007042	SMARCA1	99	91.395	ENSRROG00000034167	SMARCA1	95	91.232	Rhinopithecus_roxellana
ENSMGAG00000007042	SMARCA1	99	91.304	ENSSBOG00000020641	SMARCA1	100	91.935	Saimiri_boliviensis_boliviensis
ENSMGAG00000007042	SMARCA1	97	87.411	ENSSHAG00000013518	SMARCA1	99	87.411	Sarcophilus_harrisii
ENSMGAG00000007042	SMARCA1	99	89.437	ENSSFOG00015009043	smarca1	98	89.437	Scleropages_formosus
ENSMGAG00000007042	SMARCA1	99	83.167	ENSSFOG00015016794	smarca5	100	84.012	Scleropages_formosus
ENSMGAG00000007042	SMARCA1	98	82.082	ENSSMAG00000004801	smarca5	95	82.082	Scophthalmus_maximus
ENSMGAG00000007042	SMARCA1	98	82.797	ENSSDUG00000020690	smarca5	95	82.797	Seriola_dumerili
ENSMGAG00000007042	SMARCA1	98	82.797	ENSSLDG00000025190	smarca5	95	82.797	Seriola_lalandi_dorsalis
ENSMGAG00000007042	SMARCA1	90	84.899	ENSSARG00000000842	SMARCA1	90	85.227	Sorex_araneus
ENSMGAG00000007042	SMARCA1	98	95.657	ENSSPUG00000000590	SMARCA1	95	95.657	Sphenodon_punctatus
ENSMGAG00000007042	SMARCA1	98	82.998	ENSSPAG00000002894	smarca5	97	83.585	Stegastes_partitus
ENSMGAG00000007042	SMARCA1	97	91.650	ENSSSCG00000012649	SMARCA1	94	91.574	Sus_scrofa
ENSMGAG00000007042	SMARCA1	98	97.787	ENSTGUG00000003899	-	100	97.787	Taeniopygia_guttata
ENSMGAG00000007042	SMARCA1	98	82.998	ENSTRUG00000014094	smarca5	95	82.998	Takifugu_rubripes
ENSMGAG00000007042	SMARCA1	97	82.186	ENSTNIG00000017717	smarca5	94	81.891	Tetraodon_nigroviridis
ENSMGAG00000007042	SMARCA1	97	85.005	ENSTBEG00000014973	SMARCA1	98	85.185	Tupaia_belangeri
ENSMGAG00000007042	SMARCA1	97	88.583	ENSTTRG00000006168	SMARCA1	98	88.820	Tursiops_truncatus
ENSMGAG00000007042	SMARCA1	99	90.702	ENSUAMG00000020201	SMARCA1	95	90.542	Ursus_americanus
ENSMGAG00000007042	SMARCA1	99	86.871	ENSUMAG00000004073	SMARCA1	96	93.171	Ursus_maritimus
ENSMGAG00000007042	SMARCA1	81	92.810	ENSVPAG00000010492	-	84	93.814	Vicugna_pacos
ENSMGAG00000007042	SMARCA1	99	91.304	ENSVVUG00000008878	SMARCA1	98	92.752	Vulpes_vulpes
ENSMGAG00000007042	SMARCA1	99	91.964	ENSXETG00000001526	smarca1	100	91.964	Xenopus_tropicalis
ENSMGAG00000007042	SMARCA1	98	82.998	ENSXCOG00000011170	smarca5	97	82.998	Xiphophorus_couchianus
ENSMGAG00000007042	SMARCA1	98	82.998	ENSXMAG00000009678	smarca5	98	83.923	Xiphophorus_maculatus