EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMGAG00000007050 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Meleagris_gallopavo
Status: putative
Strand: Plus strand
Length: 10923 bases
Position: chr11:12689841-12700763
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMGAP00000007160	MMR_HSR1	PF01926.23	7.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMGAT00000007926	LSG1-201	2060	-	ENSMGAP00000007160	588 (aa)	-	G1N5D9

Gene Model

Click here to download ENSMGAG00000007050's gene model file

Pathways

Pathway ID	Pathway Name	Source
mgp03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMGAG00000007050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMGAG00000007050	LSG1	99	64.833	ENSG00000041802	LSG1	89	66.440	Homo_sapiens
ENSMGAG00000007050	LSG1	99	62.775	ENSAPOG00000009694	lsg1	89	62.944	Acanthochromis_polyacanthus
ENSMGAG00000007050	LSG1	99	65.816	ENSAMEG00000009343	LSG1	89	65.476	Ailuropoda_melanoleuca
ENSMGAG00000007050	LSG1	99	62.901	ENSACIG00000012406	lsg1	88	62.139	Amphilophus_citrinellus
ENSMGAG00000007050	LSG1	99	62.437	ENSAOCG00000016066	lsg1	89	62.458	Amphiprion_ocellaris
ENSMGAG00000007050	LSG1	99	62.267	ENSAPEG00000003252	lsg1	89	61.953	Amphiprion_percula
ENSMGAG00000007050	LSG1	99	62.818	ENSATEG00000011794	lsg1	88	62.818	Anabas_testudineus
ENSMGAG00000007050	LSG1	99	64.154	ENSACAG00000004222	LSG1	93	62.689	Anolis_carolinensis
ENSMGAG00000007050	LSG1	99	65.144	ENSANAG00000021153	LSG1	89	66.440	Aotus_nancymaae
ENSMGAG00000007050	LSG1	99	62.353	ENSACLG00000000520	lsg1	88	61.486	Astatotilapia_calliptera
ENSMGAG00000007050	LSG1	100	61.913	ENSAMXG00000008271	lsg1	89	60.840	Astyanax_mexicanus
ENSMGAG00000007050	LSG1	99	66.269	ENSBTAG00000008461	LSG1	88	66.269	Bos_taurus
ENSMGAG00000007050	LSG1	77	51.176	WBGene00016907	C53H9.2	84	51.176	Caenorhabditis_elegans
ENSMGAG00000007050	LSG1	99	65.306	ENSCJAG00000013962	LSG1	89	65.928	Callithrix_jacchus
ENSMGAG00000007050	LSG1	99	65.247	ENSCAFG00000013445	LSG1	93	64.189	Canis_familiaris
ENSMGAG00000007050	LSG1	99	64.915	ENSCAFG00020002216	LSG1	94	64.202	Canis_lupus_dingo
ENSMGAG00000007050	LSG1	99	66.440	ENSCHIG00000015769	LSG1	89	65.878	Capra_hircus
ENSMGAG00000007050	LSG1	99	65.758	ENSTSYG00000001447	LSG1	89	65.928	Carlito_syrichta
ENSMGAG00000007050	LSG1	99	64.068	ENSCAPG00000009856	LSG1	93	62.351	Cavia_aperea
ENSMGAG00000007050	LSG1	99	64.636	ENSCCAG00000035744	LSG1	88	65.417	Cebus_capucinus
ENSMGAG00000007050	LSG1	99	65.932	ENSCATG00000042060	LSG1	88	65.247	Cercocebus_atys
ENSMGAG00000007050	LSG1	99	65.758	ENSCSAG00000008796	LSG1	81	66.269	Chlorocebus_sabaeus
ENSMGAG00000007050	LSG1	99	73.765	ENSCPBG00000015941	LSG1	74	73.765	Chrysemys_picta_bellii
ENSMGAG00000007050	LSG1	62	61.780	ENSCING00000007079	-	78	61.780	Ciona_intestinalis
ENSMGAG00000007050	LSG1	66	61.979	ENSCSAVG00000002514	-	78	54.598	Ciona_savignyi
ENSMGAG00000007050	LSG1	99	65.417	ENSCANG00000030709	LSG1	89	66.099	Colobus_angolensis_palliatus
ENSMGAG00000007050	LSG1	99	66.497	ENSCGRG00001019846	Lsg1	88	64.796	Cricetulus_griseus_chok1gshd
ENSMGAG00000007050	LSG1	99	66.497	ENSCGRG00000014617	Lsg1	88	64.796	Cricetulus_griseus_crigri
ENSMGAG00000007050	LSG1	99	62.017	ENSCSEG00000008522	lsg1	88	61.149	Cynoglossus_semilaevis
ENSMGAG00000007050	LSG1	99	62.692	ENSCVAG00000002484	lsg1	88	62.775	Cyprinodon_variegatus
ENSMGAG00000007050	LSG1	99	64.129	ENSDARG00000015352	lsg1	88	63.452	Danio_rerio
ENSMGAG00000007050	LSG1	99	65.254	ENSDNOG00000006224	LSG1	89	64.310	Dasypus_novemcinctus
ENSMGAG00000007050	LSG1	79	60.479	FBgn0266284	Ns3	79	57.778	Drosophila_melanogaster
ENSMGAG00000007050	LSG1	87	59.883	ENSETEG00000003888	LSG1	78	59.188	Echinops_telfairi
ENSMGAG00000007050	LSG1	99	54.167	ENSEBUG00000003119	lsg1	85	53.488	Eptatretus_burgeri
ENSMGAG00000007050	LSG1	99	66.780	ENSEASG00005000678	LSG1	89	67.121	Equus_asinus_asinus
ENSMGAG00000007050	LSG1	99	66.951	ENSECAG00000017659	LSG1	89	67.291	Equus_caballus
ENSMGAG00000007050	LSG1	85	64.103	ENSEEUG00000015217	LSG1	75	64.655	Erinaceus_europaeus
ENSMGAG00000007050	LSG1	99	60.840	ENSELUG00000023973	lsg1	88	60.702	Esox_lucius
ENSMGAG00000007050	LSG1	99	66.440	ENSFCAG00000024957	LSG1	89	66.440	Felis_catus
ENSMGAG00000007050	LSG1	99	85.399	ENSFALG00000007210	LSG1	90	85.399	Ficedula_albicollis
ENSMGAG00000007050	LSG1	99	64.395	ENSFDAG00000017373	LSG1	88	63.682	Fukomys_damarensis
ENSMGAG00000007050	LSG1	99	62.098	ENSFHEG00000003680	lsg1	88	60.134	Fundulus_heteroclitus
ENSMGAG00000007050	LSG1	84	68.092	ENSGMOG00000015834	lsg1	76	68.108	Gadus_morhua
ENSMGAG00000007050	LSG1	100	96.769	ENSGALG00000007058	LSG1	79	96.769	Gallus_gallus
ENSMGAG00000007050	LSG1	99	61.840	ENSGAFG00000015831	lsg1	88	62.010	Gambusia_affinis
ENSMGAG00000007050	LSG1	99	59.867	ENSGACG00000009323	lsg1	88	59.370	Gasterosteus_aculeatus
ENSMGAG00000007050	LSG1	99	65.424	ENSGGOG00000000520	LSG1	89	65.928	Gorilla_gorilla
ENSMGAG00000007050	LSG1	99	62.017	ENSHBUG00000005659	lsg1	88	62.649	Haplochromis_burtoni
ENSMGAG00000007050	LSG1	99	62.901	ENSHGLG00000017390	LSG1	88	62.901	Heterocephalus_glaber_female
ENSMGAG00000007050	LSG1	99	62.901	ENSHGLG00100018587	LSG1	88	62.901	Heterocephalus_glaber_male
ENSMGAG00000007050	LSG1	99	60.374	ENSHCOG00000016848	lsg1	88	60.508	Hippocampus_comes
ENSMGAG00000007050	LSG1	99	62.755	ENSIPUG00000008631	lsg1	88	62.542	Ictalurus_punctatus
ENSMGAG00000007050	LSG1	86	64.016	ENSSTOG00000010234	LSG1	92	64.016	Ictidomys_tridecemlineatus
ENSMGAG00000007050	LSG1	99	65.705	ENSJJAG00000015513	Lsg1	88	64.189	Jaculus_jaculus
ENSMGAG00000007050	LSG1	99	60.980	ENSKMAG00000009681	lsg1	88	60.304	Kryptolebias_marmoratus
ENSMGAG00000007050	LSG1	99	61.670	ENSLBEG00000024261	lsg1	88	61.356	Labrus_bergylta
ENSMGAG00000007050	LSG1	99	66.164	ENSLACG00000013399	LSG1	89	65.378	Latimeria_chalumnae
ENSMGAG00000007050	LSG1	99	63.776	ENSLOCG00000004918	lsg1	88	63.667	Lepisosteus_oculatus
ENSMGAG00000007050	LSG1	99	65.986	ENSLAFG00000012919	-	89	64.716	Loxodonta_africana
ENSMGAG00000007050	LSG1	99	65.932	ENSMFAG00000039903	LSG1	88	65.247	Macaca_fascicularis
ENSMGAG00000007050	LSG1	99	65.932	ENSMMUG00000010708	LSG1	89	66.440	Macaca_mulatta
ENSMGAG00000007050	LSG1	99	65.932	ENSMNEG00000031538	LSG1	88	65.077	Macaca_nemestrina
ENSMGAG00000007050	LSG1	99	66.271	ENSMLEG00000041184	LSG1	89	66.780	Mandrillus_leucophaeus
ENSMGAG00000007050	LSG1	99	61.513	ENSMAMG00000000470	lsg1	88	60.302	Mastacembelus_armatus
ENSMGAG00000007050	LSG1	99	62.017	ENSMZEG00005017865	lsg1	88	62.649	Maylandia_zebra
ENSMGAG00000007050	LSG1	93	63.636	ENSMAUG00000016976	Lsg1	84	60.682	Mesocricetus_auratus
ENSMGAG00000007050	LSG1	99	64.736	ENSMICG00000049087	LSG1	89	64.636	Microcebus_murinus
ENSMGAG00000007050	LSG1	99	64.915	ENSMOCG00000022136	Lsg1	88	64.746	Microtus_ochrogaster
ENSMGAG00000007050	LSG1	81	71.237	ENSMMOG00000008884	lsg1	85	70.950	Mola_mola
ENSMGAG00000007050	LSG1	99	57.358	ENSMODG00000019828	LSG1	89	56.436	Monodelphis_domestica
ENSMGAG00000007050	LSG1	99	67.291	MGP_CAROLIEiJ_G0020648	Lsg1	88	67.291	Mus_caroli
ENSMGAG00000007050	LSG1	99	67.802	ENSMUSG00000022538	Lsg1	88	67.802	Mus_musculus
ENSMGAG00000007050	LSG1	99	67.632	MGP_PahariEiJ_G0016352	Lsg1	88	67.973	Mus_pahari
ENSMGAG00000007050	LSG1	99	68.143	MGP_SPRETEiJ_G0021544	Lsg1	88	68.143	Mus_spretus
ENSMGAG00000007050	LSG1	99	65.588	ENSMPUG00000003734	LSG1	89	65.588	Mustela_putorius_furo
ENSMGAG00000007050	LSG1	99	67.233	ENSMLUG00000012548	LSG1	89	67.063	Myotis_lucifugus
ENSMGAG00000007050	LSG1	99	65.077	ENSNGAG00000021872	Lsg1	88	64.736	Nannospalax_galili
ENSMGAG00000007050	LSG1	99	65.709	ENSNLEG00000008293	LSG1	89	66.780	Nomascus_leucogenys
ENSMGAG00000007050	LSG1	77	67.232	ENSMEUG00000009041	-	82	67.010	Notamacropus_eugenii
ENSMGAG00000007050	LSG1	99	62.881	ENSONIG00000002635	lsg1	88	62.542	Oreochromis_niloticus
ENSMGAG00000007050	LSG1	99	68.866	ENSOANG00000012742	LSG1	92	66.893	Ornithorhynchus_anatinus
ENSMGAG00000007050	LSG1	99	65.878	ENSOCUG00000004817	LSG1	89	66.667	Oryctolagus_cuniculus
ENSMGAG00000007050	LSG1	99	61.329	ENSORLG00000007695	lsg1	88	60.988	Oryzias_latipes
ENSMGAG00000007050	LSG1	99	61.329	ENSORLG00020016286	lsg1	88	61.329	Oryzias_latipes_hni
ENSMGAG00000007050	LSG1	99	61.054	ENSORLG00015012025	lsg1	88	60.647	Oryzias_latipes_hsok
ENSMGAG00000007050	LSG1	99	59.628	ENSOMEG00000022379	lsg1	88	59.524	Oryzias_melastigma
ENSMGAG00000007050	LSG1	99	64.286	ENSOGAG00000003475	LSG1	88	64.933	Otolemur_garnettii
ENSMGAG00000007050	LSG1	99	65.986	ENSOARG00000020403	LSG1	89	65.936	Ovis_aries
ENSMGAG00000007050	LSG1	99	66.441	ENSPPAG00000029271	LSG1	89	66.269	Pan_paniscus
ENSMGAG00000007050	LSG1	99	65.050	ENSPPRG00000010281	LSG1	89	65.050	Panthera_pardus
ENSMGAG00000007050	LSG1	99	65.990	ENSPTIG00000010789	LSG1	89	65.990	Panthera_tigris_altaica
ENSMGAG00000007050	LSG1	99	66.271	ENSPTRG00000015760	LSG1	89	66.099	Pan_troglodytes
ENSMGAG00000007050	LSG1	99	65.932	ENSPANG00000018249	LSG1	88	65.247	Papio_anubis
ENSMGAG00000007050	LSG1	99	61.864	ENSPKIG00000002895	lsg1	89	61.017	Paramormyrops_kingsleyae
ENSMGAG00000007050	LSG1	98	70.294	ENSPSIG00000009821	LSG1	89	68.566	Pelodiscus_sinensis
ENSMGAG00000007050	LSG1	99	62.649	ENSPMGG00000000931	lsg1	93	61.630	Periophthalmus_magnuspinnatus
ENSMGAG00000007050	LSG1	99	65.932	ENSPEMG00000012082	-	89	64.815	Peromyscus_maniculatus_bairdii
ENSMGAG00000007050	LSG1	100	60.133	ENSPMAG00000007451	lsg1	89	59.766	Petromyzon_marinus
ENSMGAG00000007050	LSG1	99	65.969	ENSPCIG00000013890	LSG1	72	65.969	Phascolarctos_cinereus
ENSMGAG00000007050	LSG1	99	61.969	ENSPFOG00000021882	lsg1	88	62.479	Poecilia_formosa
ENSMGAG00000007050	LSG1	99	61.290	ENSPLAG00000019536	lsg1	88	61.800	Poecilia_latipinna
ENSMGAG00000007050	LSG1	99	61.121	ENSPMEG00000017281	lsg1	88	61.630	Poecilia_mexicana
ENSMGAG00000007050	LSG1	99	52.254	ENSPREG00000006048	lsg1	88	52.159	Poecilia_reticulata
ENSMGAG00000007050	LSG1	91	65.549	ENSPPYG00000014425	LSG1	88	64.804	Pongo_abelii
ENSMGAG00000007050	LSG1	88	57.033	ENSPCAG00000005511	LSG1	59	79.245	Procavia_capensis
ENSMGAG00000007050	LSG1	99	64.975	ENSPCOG00000012360	LSG1	89	64.906	Propithecus_coquereli
ENSMGAG00000007050	LSG1	99	62.353	ENSPNYG00000021994	lsg1	88	61.486	Pundamilia_nyererei
ENSMGAG00000007050	LSG1	99	62.584	ENSPNAG00000015533	lsg1	89	62.057	Pygocentrus_nattereri
ENSMGAG00000007050	LSG1	99	64.706	ENSRNOG00000001727	Lsg1	89	65.210	Rattus_norvegicus
ENSMGAG00000007050	LSG1	99	64.298	ENSRBIG00000029053	LSG1	89	65.588	Rhinopithecus_bieti
ENSMGAG00000007050	LSG1	99	64.298	ENSRROG00000037702	LSG1	89	65.588	Rhinopithecus_roxellana
ENSMGAG00000007050	LSG1	57	56.977	YGL099W	LSG1	51	56.376	Saccharomyces_cerevisiae
ENSMGAG00000007050	LSG1	99	65.482	ENSSBOG00000034938	LSG1	89	65.821	Saimiri_boliviensis_boliviensis
ENSMGAG00000007050	LSG1	88	63.148	ENSSHAG00000003487	LSG1	99	62.734	Sarcophilus_harrisii
ENSMGAG00000007050	LSG1	100	63.621	ENSSFOG00015008955	lsg1	88	60.877	Scleropages_formosus
ENSMGAG00000007050	LSG1	99	62.309	ENSSDUG00000004622	lsg1	88	62.139	Seriola_dumerili
ENSMGAG00000007050	LSG1	99	62.395	ENSSLDG00000010869	lsg1	88	61.840	Seriola_lalandi_dorsalis
ENSMGAG00000007050	LSG1	78	72.174	ENSSARG00000012981	LSG1	69	72.174	Sorex_araneus
ENSMGAG00000007050	LSG1	99	70.389	ENSSPUG00000016347	LSG1	88	68.855	Sphenodon_punctatus
ENSMGAG00000007050	LSG1	99	61.356	ENSSPAG00000005508	lsg1	88	61.525	Stegastes_partitus
ENSMGAG00000007050	LSG1	99	64.796	ENSSSCG00000011827	LSG1	88	63.851	Sus_scrofa
ENSMGAG00000007050	LSG1	99	84.848	ENSTGUG00000009068	LSG1	99	84.848	Taeniopygia_guttata
ENSMGAG00000007050	LSG1	99	59.153	ENSTRUG00000017380	lsg1	88	58.883	Takifugu_rubripes
ENSMGAG00000007050	LSG1	99	62.309	ENSTNIG00000015570	lsg1	88	62.521	Tetraodon_nigroviridis
ENSMGAG00000007050	LSG1	99	61.121	ENSTTRG00000000559	LSG1	89	59.359	Tursiops_truncatus
ENSMGAG00000007050	LSG1	99	64.636	ENSUAMG00000012454	LSG1	89	64.298	Ursus_americanus
ENSMGAG00000007050	LSG1	99	64.636	ENSUMAG00000000855	LSG1	89	64.298	Ursus_maritimus
ENSMGAG00000007050	LSG1	99	62.437	ENSVPAG00000012400	LSG1	93	60.870	Vicugna_pacos
ENSMGAG00000007050	LSG1	99	64.566	ENSVVUG00000008956	LSG1	91	63.851	Vulpes_vulpes
ENSMGAG00000007050	LSG1	99	63.866	ENSXETG00000003451	lsg1	89	63.932	Xenopus_tropicalis
ENSMGAG00000007050	LSG1	99	61.421	ENSXCOG00000003239	lsg1	88	61.591	Xiphophorus_couchianus
ENSMGAG00000007050	LSG1	99	61.460	ENSXMAG00000005536	lsg1	88	61.248	Xiphophorus_maculatus